prot_P-wetherbeei_contig8448.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8448.1.1
Unique Nameprot_P-wetherbeei_contig8448.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length155
Homology
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A1H8P480_9PROT (DNA-binding transcriptional regulator, Lrp family n=2 Tax=unclassified Rhodospirillales TaxID=941843 RepID=A0A1H8P480_9PROT)

HSP 1 Score: 268 bits (684), Expect = 4.570e-90
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 0
Query:    1 MISLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMDFTKIPGIAQIRSSFALRPVKQGAALPL 152
            MISLD+IDRRIL HLQK+GRVSNADLA +VGLSSSPCWRRVKALEEAGVIKGY AQVDA+AVGLSVNVF+SVSLSTQVEK+LQAFERAAA RPEVMECYLMTGDSDYLLR+VVPDL+AYERFVMDFTKI GIAQIRSSFALR VKQGAALPL
Sbjct:    1 MISLDAIDRRILDHLQKNGRVSNADLAGQVGLSSSPCWRRVKALEEAGVIKGYAAQVDAKAVGLSVNVFMSVSLSTQVEKALQAFERAAAARPEVMECYLMTGDSDYLLRIVVPDLEAYERFVMDFTKIAGIAQIRSSFALRTVKQGAALPL 152          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A1T4THR3_9HYPH (Transcriptional regulator, AsnC family n=11 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1T4THR3_9HYPH)

HSP 1 Score: 258 bits (659), Expect = 2.410e-86
Identity = 132/152 (86.84%), Postives = 142/152 (93.42%), Query Frame = 0
Query:    1 MISLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMDFTKIPGIAQIRSSFALRPVKQGAALPL 152
            MISLD+IDRRIL  LQ+DGR+SN +LAE+VGLSSSPCWRRVKALEEAGVIKGY A VDA+ VGLSVNVF+SVSLSTQ EKSL+ FERAAA RPEVMECYLMTGDSDYLLR+VVPDL+AYERFVMDFTKIPGIAQIRSSFALRPVKQG ALPL
Sbjct:    1 MISLDAIDRRILEKLQQDGRLSNTELAEKVGLSSSPCWRRVKALEEAGVIKGYAALVDAKTVGLSVNVFMSVSLSTQNEKSLKDFERAAAARPEVMECYLMTGDSDYLLRIVVPDLEAYERFVMDFTKIPGIAQIRSSFALRPVKQGTALPL 152          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A537MXH6_9PROT (Lrp/AsnC family transcriptional regulator (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MXH6_9PROT)

HSP 1 Score: 248 bits (634), Expect = 1.270e-82
Identity = 129/150 (86.00%), Postives = 140/150 (93.33%), Query Frame = 0
Query:    1 MISLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMDFTKIPGIAQIRSSFALRPVKQGAAL 150
            MI+LD+IDRRIL  LQ+DGR+SNADLA++VGLSSSPCWRRVKALEEAGVIKG    +DA+ VGLSVNVF+SVSLSTQ EKSLQAFERAAA RPEVMECYLMTGDSDYLLR+VVPDL+AYERFVMDFTKIPGIAQIRSSFALRPVKQG AL
Sbjct:    1 MITLDAIDRRILERLQQDGRLSNADLADKVGLSSSPCWRRVKALEEAGVIKGL---LDAKTVGLSVNVFMSVSLSTQNEKSLQAFERAAAARPEVMECYLMTGDSDYLLRIVVPDLEAYERFVMDFTKIPGIAQIRSSFALRPVKQGTAL 147          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A5C8PE89_9HYPH (Lrp/AsnC family transcriptional regulator n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8PE89_9HYPH)

HSP 1 Score: 237 bits (604), Expect = 7.340e-78
Identity = 116/150 (77.33%), Postives = 134/150 (89.33%), Query Frame = 0
Query:    3 SLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMDFTKIPGIAQIRSSFALRPVKQGAALPL 152
            +LD IDR IL  LQ+DGR+SNADLAE+VGLS+SPCWRRVKALEE G+I+GY A VDA+AVGL V+VF+SVSL+TQV+ +LQ FE+A   RPEVMECYLMTGDSDYLLRVVVPDL+AYERFVMDFT+I G+ QIRSSFALRPVKQG ALP+
Sbjct:    7 ALDGIDRHILESLQRDGRLSNADLAEKVGLSASPCWRRVKALEETGIIRGYVAVVDAKAVGLPVSVFMSVSLTTQVQSALQRFEKAVQQRPEVMECYLMTGDSDYLLRVVVPDLEAYERFVMDFTRIAGVGQIRSSFALRPVKQGTALPM 156          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A2E6Q601_9PROT (ArsR family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q601_9PROT)

HSP 1 Score: 192 bits (489), Expect = 2.280e-60
Identity = 95/154 (61.69%), Postives = 121/154 (78.57%), Query Frame = 0
Query:    2 ISLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMD-FTKIPGIAQIRSSFALRPVKQGAALPLDR 154
            I++D++D+RIL  +Q++ R+SN DLAERVG+S SPCWRRVK LEEAG+I+ +   VD  AVGL V+VF+ V+L  Q+E +L+ FER    RPEVMECYLMTGD+DYLLRVVV DL AYERF+MD  T+I G+A I SSFAL+ VK   ALP+D+
Sbjct:    4 IAMDAVDQRILAVMQENARISNVDLAERVGISPSPCWRRVKTLEEAGIIQRHVTLVDPAAVGLPVSVFIQVTLERQIETALETFERTVLERPEVMECYLMTGDADYLLRVVVADLAAYERFLMDHLTRINGVASINSSFALKQVKYRTALPVDQ 157          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A3S0R9F3_9PROT (Lrp/AsnC family transcriptional regulator n=2 Tax=Azospirillum TaxID=191 RepID=A0A3S0R9F3_9PROT)

HSP 1 Score: 192 bits (489), Expect = 2.360e-60
Identity = 103/152 (67.76%), Postives = 118/152 (77.63%), Query Frame = 0
Query:    2 ISLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMD-FTKIPGIAQIRSSFALRPVKQGAALPL 152
            I LD IDR+IL  LQ+DGR  N +LAERVGLS SPC RRVKALEEAGVI  Y A VD   V L+VN+FVSVSL  QVE+ L AFE A   RPEV+ECYLM+GD+DYLLRVVVPDL +YERF+ D  T+IPG+A IRSSFAL+ V+   ALPL
Sbjct:    4 IKLDRIDRKILAQLQEDGRQPNNELAERVGLSPSPCLRRVKALEEAGVISRYVALVDPVTVDLAVNIFVSVSLDRQVEERLDAFEAAVMERPEVLECYLMSGDADYLLRVVVPDLASYERFLKDHLTRIPGLAGIRSSFALKQVRYRTALPL 155          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A2E6QHV8_9PROT (ArsR family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QHV8_9PROT)

HSP 1 Score: 192 bits (488), Expect = 4.060e-60
Identity = 95/150 (63.33%), Postives = 121/150 (80.67%), Query Frame = 0
Query:    4 LDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMD-FTKIPGIAQIRSSFALRPVKQGAALPL 152
            LD+IDRRIL  LQ+D R+SN DLA+  G+S SPC RRV+ALEE GVI+GY   +D  AVGL V++FVSVSL  Q+E++L+ FE A ++ PEV+ECYLMTGD+DYLLRVVVPDL AYERF+MD  T++PG++ I+SSFAL+ V   +ALPL
Sbjct:    6 LDAIDRRILAKLQEDARISNVDLAKGAGISPSPCLRRVRALEERGVIRGYVTVLDQTAVGLPVSIFVSVSLERQIERALEEFETAVSSWPEVLECYLMTGDADYLLRVVVPDLSAYERFLMDHLTRVPGVSSIKSSFALKQVSHRSALPL 155          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: UPI001AE8DAE6 (Lrp/AsnC family transcriptional regulator n=1 Tax=Azospirillum picis TaxID=488438 RepID=UPI001AE8DAE6)

HSP 1 Score: 192 bits (487), Expect = 4.750e-60
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 0
Query:    3 SLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMD-FTKIPGIAQIRSSFALRPVKQGAALPLD 153
            +LD IDR+IL  LQ+DGR+ N +LAERVGLS SPC RRVKALEEAGVI  Y A VD  +V L +N+FVSVSL  Q+E+ + AFE A   RPEV+ECYLMTGD+DYLLRV+VPDL +YERF+ D  T+IPG+A IRSSFAL+ V+   +LPL+
Sbjct:    5 NLDRIDRKILSALQEDGRLHNNELAERVGLSPSPCLRRVKALEEAGVISRYVALVDPASVDLQLNIFVSVSLERQIEERIDAFESAVMTRPEVLECYLMTGDADYLLRVMVPDLASYERFLKDHLTRIPGVANIRSSFALKQVRYRTSLPLE 156          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: UPI0015D49CCF (Lrp/AsnC family transcriptional regulator n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D49CCF)

HSP 1 Score: 191 bits (485), Expect = 9.570e-60
Identity = 99/150 (66.00%), Postives = 119/150 (79.33%), Query Frame = 0
Query:    4 LDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMD-FTKIPGIAQIRSSFALRPVKQGAALPL 152
            LD IDR IL  LQ+DGR++N+DL++RVGLS SPC RRVKALEE GVI+ Y A VD  AV LSV+VFVSV+L  QVE+ L AFE A    PEV+ECYLMTG++DYLLRVVVPDL AYERF+ D  T++PG+A I+SSFAL+ V+   ALPL
Sbjct:    6 LDRIDRNILALLQQDGRMANSDLSQRVGLSPSPCLRRVKALEETGVIRNYVALVDPAAVDLSVSVFVSVTLERQVEERLDAFEAAVVRWPEVLECYLMTGEADYLLRVVVPDLAAYERFLKDHLTRVPGVASIKSSFALKQVRYNTALPL 155          
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Match: A0A2E7R9H3_9PROT (ArsR family transcriptional regulator n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7R9H3_9PROT)

HSP 1 Score: 190 bits (483), Expect = 1.990e-59
Identity = 95/151 (62.91%), Postives = 118/151 (78.15%), Query Frame = 0
Query:    4 LDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVIKGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYLMTGDSDYLLRVVVPDLDAYERFVMD-FTKIPGIAQIRSSFALRPVKQGAALPLD 153
            LD++DRRIL  LQ+  R+SN DLAE+VG+S SPCWRRVK LE++GVI  + + VD  AVGL V+VF+ V+L  Q+E +L+ FE+    RPEVMECYLMTGDSDYLLRVVV DL AYERF+MD  T++ G+A I+SSFAL+ VK G ALPL 
Sbjct:    6 LDAVDRRILAVLQEHARISNVDLAEQVGISPSPCWRRVKTLEDSGVIAKHVSLVDPAAVGLPVSVFIQVTLERQIETALETFEQTVLARPEVMECYLMTGDSDYLLRVVVADLSAYERFLMDHLTRLNGVASIKSSFALKQVKYGTALPLS 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8448.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8P480_9PROT4.570e-9090.79DNA-binding transcriptional regulator, Lrp family ... [more]
A0A1T4THR3_9HYPH2.410e-8686.84Transcriptional regulator, AsnC family n=11 Tax=Al... [more]
A0A537MXH6_9PROT1.270e-8286.00Lrp/AsnC family transcriptional regulator (Fragmen... [more]
A0A5C8PE89_9HYPH7.340e-7877.33Lrp/AsnC family transcriptional regulator n=2 Tax=... [more]
A0A2E6Q601_9PROT2.280e-6061.69ArsR family transcriptional regulator n=1 Tax=Rhod... [more]
A0A3S0R9F3_9PROT2.360e-6067.76Lrp/AsnC family transcriptional regulator n=2 Tax=... [more]
A0A2E6QHV8_9PROT4.060e-6063.33ArsR family transcriptional regulator n=1 Tax=Rhod... [more]
UPI001AE8DAE64.750e-6064.47Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
UPI0015D49CCF9.570e-6066.00Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
A0A2E7R9H3_9PROT1.990e-5962.91ArsR family transcriptional regulator n=2 Tax=Rhod... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000485AsnC-type HTH domainPRINTSPR00033HTHASNCcoord: 31..50
score: 46.11
coord: 4..20
score: 53.1
coord: 20..31
score: 41.44
IPR000485AsnC-type HTH domainPROSITEPS50956HTH_ASNC_2coord: 4..65
score: 43.137909
IPR019888Transcription regulator AsnC-likeSMARTSM00344asnccoord: 4..113
e-value: 2.5E-48
score: 176.5
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 5..55
e-value: 4.3E-26
score: 92.1
NoneNo IPR availablePFAMPF13412HTH_24coord: 4..51
e-value: 9.9E-22
score: 76.2
NoneNo IPR availableGENE3D3.30.70.920coord: 57..140
e-value: 2.7E-27
score: 96.4
NoneNo IPR availablePANTHERPTHR30154:SF34TRANSCRIPTIONAL REGULATOR AZLBcoord: 2..153
NoneNo IPR availablePANTHERPTHR30154LEUCINE-RESPONSIVE REGULATORY PROTEINcoord: 2..153
IPR019887Transcription regulator AsnC/Lrp, ligand binding domainPFAMPF01037AsnC_trans_regcoord: 70..142
e-value: 1.2E-24
score: 86.0
IPR019885Transcription regulator HTH, AsnC-type, conserved sitePROSITEPS00519HTH_ASNC_1coord: 22..48
IPR011991ArsR-like helix-turn-helix domainCDDcd00090HTH_ARSRcoord: 5..53
e-value: 1.28998E-9
score: 49.9897
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 3..63
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 64..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8448contigP-wetherbeei_contig8448:1871..2335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8448.1.1mRNA_P-wetherbeei_contig8448.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8448 1871..2344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8448.1.1 ID=prot_P-wetherbeei_contig8448.1.1|Name=mRNA_P-wetherbeei_contig8448.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
MISLDSIDRRILGHLQKDGRVSNADLAERVGLSSSPCWRRVKALEEAGVI
KGYTAQVDARAVGLSVNVFVSVSLSTQVEKSLQAFERAAANRPEVMECYL
MTGDSDYLLRVVVPDLDAYERFVMDFTKIPGIAQIRSSFALRPVKQGAAL
PLDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000485AsnC-type_HTH_dom
IPR019888Tscrpt_reg_AsnC-like
IPR036388WH-like_DNA-bd_sf
IPR019887Tscrpt_reg_AsnC/Lrp_C
IPR019885Tscrpt_reg_HTH_AsnC-type_CS
IPR011991ArsR-like_HTH
IPR036390WH_DNA-bd_sf
IPR011008Dimeric_a/b-barrel