prot_P-wetherbeei_contig8435.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8435.1.1
Unique Nameprot_P-wetherbeei_contig8435.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length185
Homology
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A835Z759_9STRA (SBDS protein C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z759_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.640e-9
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0
Query:  147 SKLRCNTCGIGFLDTAAHREHFKTDWHRYNLKMKVR 182
            SKL+CNTC   F DT A+R+HFK+DWHRYNLK+K++
Sbjct:  382 SKLKCNTCAAAFADTTAYRDHFKSDWHRYNLKLKMK 417          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A6H5JHB7_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB7_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.230e-8
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  128 ATMGEKDSREAAVAADIPVSK--LRCNTCGIGFLDTAAHREHFKTDWHRYNLKMKVR 182
            AT  ++D+RE     D+  +K  L CNTCG+ F DT AHREH+K+D HRYNLK+K++
Sbjct:  414 ATERDQDAREQG-GGDVGKAKRPLGCNTCGLTFPDTGAHREHYKSDLHRYNLKLKMK 469          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A196SHL3_BLAHN (Ribosome maturation protein SBDS n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SHL3_BLAHN)

HSP 1 Score: 60.8 bits (146), Expect = 1.140e-7
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0
Query:  138 AAVAADIPVSKLRCNTCGIGFLDTAAHREHFKTDWHRYNLKMK 180
            AA  A +  S+ +C+TC  GF DT A+REHF++DWHR+NLK K
Sbjct:  266 AAEPAALQTSRFKCSTCQAGFQDTGAYREHFRSDWHRFNLKRK 308          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A5B8N2X1_9CHLO (Ribosome maturation protein Sdo1/SBDS n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N2X1_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.270e-7
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0
Query:  129 TMGEKDSREAAVA--ADIPVSKLRCNTCGIGFLDTAAHREHFKTDWHRYNLKMK 180
            +MG    +  AVA  A   V + +CNTC +GF D+  HREHFK+DWHR NLK K
Sbjct:  312 SMGLTGDQTIAVASAATAVVGRFKCNTCQVGFDDSKQHREHFKSDWHRINLKRK 365          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: F0XZC1_AURAN (C2H2-type domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZC1_AURAN)

HSP 1 Score: 55.5 bits (132), Expect = 2.190e-7
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 0
Query:  149 LRCNTCGIGFLDTAAHREHFKTDWHRYNLKMKV 181
            L CNTCG  F D  AHR+HFK++WHR+NL +K+
Sbjct:    4 LSCNTCGGSFADKQAHRDHFKSEWHRHNLSLKL 36          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A7S3NJM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJM4_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.350e-7
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0
Query:  149 LRCNTCGIGFLDTAAHREHFKTDWHRYNLKMKV 181
            L CNTCG  F DTAAHR HF++DWHRYNLK K+
Sbjct:  343 LTCNTCGGSFSDTAAHRCHFRSDWHRYNLKRKL 375          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A7S2W459_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W459_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.480e-7
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
Query:  147 SKLRCNTCGIGFLDTAAHREHFKTDWHRYNLKMKV 181
            ++  CNTCG  F   AAHREHFK+DWHRYNLK+K+
Sbjct:  394 TRRSCNTCGGSFSSPAAHREHFKSDWHRYNLKLKM 428          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A6G0WVX6_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVX6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.060e-7
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0
Query:  135 SREAAVAADIPVSKLR----CNTCGIGFLDTAAHREHFKTDWHRYNLKMKVR 182
            S  A VAA  P         C+TCG GF DTA +REHF+++WHRYNLK+K +
Sbjct:  292 SAPAPVAAPAPSGSTSGGRPCSTCGGGFADTAQYREHFRSEWHRYNLKLKAK 343          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A418BAS8_9STRA (C2H2-type domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BAS8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.320e-7
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  138 AAVAADIPVSKLR--CNTCGIGFLDTAAHREHFKTDWHRYNLKMKVR 182
            AA A++ P +     C+TCG  F DTA +REHF+++WHRYNLK+K +
Sbjct:  371 AATASNAPAASAGRPCSTCGGAFTDTAVYREHFRSEWHRYNLKLKAK 417          
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Match: A0A397EQD1_9STRA (C2H2-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EQD1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.590e-7
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 0
Query:  141 AADIPVSKLRCNTCGIGFLDTAAHREHFKTDWHRYNLKMKVR 182
            AA  PV +  C+TCG  F+DTA +REHF+++WHRYNLK+K +
Sbjct:  422 AAPAPVGRP-CSTCGGAFVDTALYREHFRSEWHRYNLKLKAK 462          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8435.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z759_9STRA4.640e-966.67SBDS protein C-terminal domain-containing protein ... [more]
A0A6H5JHB7_9PHAE2.230e-852.63C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A196SHL3_BLAHN1.140e-755.81Ribosome maturation protein SBDS n=1 Tax=Blastocys... [more]
A0A5B8N2X1_9CHLO1.270e-751.85Ribosome maturation protein Sdo1/SBDS n=1 Tax=Chlo... [more]
F0XZC1_AURAN2.190e-760.61C2H2-type domain-containing protein (Fragment) n=1... [more]
A0A7S3NJM4_9STRA2.350e-772.73Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2W459_9STRA2.480e-765.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6G0WVX6_9STRA3.060e-751.92C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A418BAS8_9STRA8.320e-751.06C2H2-type domain-containing protein n=2 Tax=Aphano... [more]
A0A397EQD1_9STRA8.590e-757.14C2H2-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..99
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 151..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8435contigP-wetherbeei_contig8435:457..1314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8435.1.1mRNA_P-wetherbeei_contig8435.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8435 457..1314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8435.1.1 ID=prot_P-wetherbeei_contig8435.1.1|Name=mRNA_P-wetherbeei_contig8435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp
QAAGAAAGGGGDDGEGSPPGKPGGAASTAAAAAASGCGGGGGGGGGGFGG
DAGGGGKGGKKSKKAKRREKEAAEERAAMAAEAATRQEERRRQRRVAAGA
PADAEEASAGADAAASGGETAVASGDAATMGEKDSREAAVAADIPVSKLR
CNTCGIGFLDTAAHREHFKTDWHRYNLKMKVRVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type