prot_P-wetherbeei_contig8374.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8374.2.1
Unique Nameprot_P-wetherbeei_contig8374.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length190
Homology
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A7S3Y1X9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1X9_HETAK)

HSP 1 Score: 315 bits (807), Expect = 2.710e-104
Identity = 150/185 (81.08%), Postives = 170/185 (91.89%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKTILLD 185
            +GVL++VLEKKLVFIETKDVVETTLALDNFKRACDCGRGA+F SVARGKVAEGIDFDRHYGRAVV+FG+PFQYTLSH LRARLEYLR   Q+REGDFLTFDALRQ AQCVGRV+RSKTDYG+M+FADSRYNRHDKRSKLP WILQF+ ++HLNLS D A+   K+FL++MAQP+DRE L+ +LLD
Sbjct:  173 IGVLRKVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGIPFQYTLSHVLRARLEYLRATHQVREGDFLTFDALRQCAQCVGRVLRSKTDYGVMLFADSRYNRHDKRSKLPPWILQFIGDAHLNLSTDVAIEYVKRFLQDMAQPIDREALEHMLLD 357          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 1.290e-100
Identity = 154/190 (81.05%), Postives = 171/190 (90.00%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKTILLDKGAVA 190
            +GVLKRVLEKKL+FIETKDVVETTLALDNFKRACDCGRGAIF SVARGKVAEGIDFDRHYGRAVV+FGVPFQYTLSH LRARLEYLR+ FQIREGDFLTFDA+RQ AQC+GRVIRSKTDYGL++ ADSRYNRHDKRSKLP W+LQFLDE+HLN+S D A A+ + FL++MAQP+D   LK  +LD   VA
Sbjct:  598 LGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRSTFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLDETHLNMSADNAAAMARMFLKDMAQPLDPLRLKGTMLDTKKVA 787          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.240e-99
Identity = 156/188 (82.98%), Postives = 167/188 (88.83%), Query Frame = 0
Query:    2 GVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKTILLDKGAV 189
            GVL +V EKKL+F+ETKDVVETTLALDNFKRACD GRGAIFFSVARGKVAEGIDFDRHYGR VV+FGVPFQYTLSH LRARLEYLR  FQIRE DFL FDALRQAAQCVGRVIRSKTDYGLMV ADSRYNRHDKRSKLP WI QFL ESHLNLS D A+++T+ FL+EMAQP+DR+ LKTIL D   V
Sbjct:  602 GVLSKVYEKKLIFLETKDVVETTLALDNFKRACDSGRGAIFFSVARGKVAEGIDFDRHYGRCVVMFGVPFQYTLSHVLRARLEYLRATFQIREADFLNFDALRQAAQCVGRVIRSKTDYGLMVLADSRYNRHDKRSKLPPWITQFLTESHLNLSTDMAISLTRMFLKEMAQPIDRDQLKTILCDAHKV 789          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A7S1YWT9_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1YWT9_TRICV)

HSP 1 Score: 292 bits (748), Expect = 6.480e-98
Identity = 141/184 (76.63%), Postives = 165/184 (89.67%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKTILL 184
            MGVL+++ + KLVFIETKDVVETTLALDN++RACD GRGA+F SVARGKV+EGI+FDRHYGRAV++FGVPFQYTLSH LRARLEYL+T +QIRE DFL FDALRQA+QCVGRVIRSKTDYGLM+FADSRYNRHDKRSKLP+WILQF+ + +LNLS D A+   K FLR MAQPVD+  L+++LL
Sbjct:   29 MGVLRQLTKHKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHVLRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKTDYGLMIFADSRYNRHDKRSKLPKWILQFMHDGYLNLSTDMALQHVKHFLRVMAQPVDQAALQSVLL 212          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A7S2M061_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M061_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.660e-97
Identity = 141/184 (76.63%), Postives = 161/184 (87.50%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKTILL 184
            MG+L+++ + KLVFIETKDVVETTLALDNF+RACD GRGA+F SVARGKV+EGI+FDRHYGRAV++FGVPFQYTLSH LRARLEYL+T +QIRE DFL FDALRQA+QCVGRVIRSK DYGLM+FADSRYNRHDKR+KLP WI  FL +  LNLS DTA+A  K FLR MAQPVD+  LK +LL
Sbjct:   35 MGILRQLTKSKLVFIETKDVVETTLALDNFRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTNYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRTKLPGWIQNFLGDGQLNLSTDTAIAQVKHFLRVMAQPVDQNKLKEVLL 218          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A484DXY6_BRELC (DNA helicase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXY6_BRELC)

HSP 1 Score: 299 bits (765), Expect = 2.670e-96
Identity = 149/191 (78.01%), Postives = 169/191 (88.48%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREV-LKTILLDKGAVA 190
            +GVLKRVL  KL+FIETKD+VETTLALDN+K+ACDCGRGA+FFSVARGKVAEGIDFDRHYGRAV+LFG+PFQYTLS+TLRARLEYLR   QIREGDFLTFDALRQAAQC GRV+RSKTDYGL++FADSRYNR DKR+KLP WI QFL +SHLNLSVD AV + K++L  MAQPV+  V + +ILLD   VA
Sbjct:  358 LGVLKRVLSSKLLFIETKDIVETTLALDNYKKACDCGRGALFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVNESVNVNSILLDADGVA 548          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A7S0FJQ4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJQ4_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.970e-96
Identity = 138/184 (75.00%), Postives = 165/184 (89.67%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKTILL 184
            MG+L+++ + KLVFIETKDVVETTLALDN++RACD GRGA+F SVARGKV+EGI+FDRHYGRAV++FGVPFQYTLSH LRARLEYL+T +QIRE DFL FDALRQA+QCVGRVIRSKTDYGLMV ADSRYNRHDKRSKLP+WILQFL + +LNLS D A+   + FLR+M+QP+D+  L+++LL
Sbjct:   73 MGILRQLTKHKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHVLRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKTDYGLMVLADSRYNRHDKRSKLPKWILQFLSDQYLNLSTDMALQHVRHFLRQMSQPIDQVALQSVLL 256          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A2U1MI62_ARTAN (RAD3-like DNA-binding helicase protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MI62_ARTAN)

HSP 1 Score: 286 bits (733), Expect = 2.270e-95
Identity = 135/175 (77.14%), Postives = 156/175 (89.14%), Query Frame = 0
Query:    2 GVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDR 176
            G+LK ++++KLVFIET+DVVETTLALDN+++ACDCGRGA+FFSVARGKVAEGIDFDRHYGR V++FGVPFQYTLS  L ARLEYLR  FQI+EGDFLTFDALRQAAQCVGRVIRSK DYG+M+FAD RY RHDKRSKLP WIL  L E+HLNLS D AV + ++FLR+MAQP D+
Sbjct:   64 GILKEIMQRKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYTRHDKRSKLPGWILSHLREAHLNLSTDMAVHIAREFLRKMAQPYDK 238          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A8J9X831_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X831_PHATR)

HSP 1 Score: 290 bits (743), Expect = 1.590e-94
Identity = 137/181 (75.69%), Postives = 163/181 (90.06%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKT 181
            +G+L+ + + KLVFIETKDVVETTLALDN++RACDCGRGA+F SVARGKV+EGI+FDRHYGRAV++FGVPFQYTLSHTLRARLEYL+T +QIRE DFL FDA+RQA+QCVGRVIRSKTDYGLM+FADSRYNRHDKRSKLP+WI QF+ +  LNLS D A++  KQFLR M QP+D+E L++
Sbjct:  256 IGILRELTKSKLVFIETKDVVETTLALDNYRRACDCGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHTLRARLEYLQTHYQIREQDFLNFDAIRQASQCVGRVIRSKTDYGLMIFADSRYNRHDKRSKLPKWIQQFMSDHFLNLSTDMALSHVKQFLRLMGQPIDQEALQS 436          
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Match: A0A7S2P3V6_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3V6_9STRA)

HSP 1 Score: 301 bits (771), Expect = 3.240e-94
Identity = 148/184 (80.43%), Postives = 167/184 (90.76%), Query Frame = 0
Query:    1 MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTFDALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDESHLNLSVDTAVAVTKQFLREMAQPVDREVLKTILL 184
            MG+L+++ + KLVFIETKDVVETTLALDNF+RACD GRGA+F SVARGKV+EGI+FDRHYGRAV++FGVPFQYTLSH LRARLEYL+T FQIRE DFL FDALRQA+QCVGRVIRSKTDYGLMVFADSRYNRHDKR+KLP+WILQFL E  LNLS D AVA  KQFLREM+QPVD+  L+T+LL
Sbjct:  667 MGILRQLSKTKLVFIETKDVVETTLALDNFRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVLMFGVPFQYTLSHVLRARLEYLQTHFQIREQDFLNFDALRQASQCVGRVIRSKTDYGLMVFADSRYNRHDKRTKLPKWILQFLGEHQLNLSSDMAVAQAKQFLREMSQPVDQSALQTVLL 850          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8374.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y1X9_HETAK2.710e-10481.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LDN2_ECTSI1.290e-10081.05General transcription and DNA repair factor IIH he... [more]
A0A836CJZ4_9STRA1.240e-9982.98General transcription and DNA repair factor IIH he... [more]
A0A7S1YWT9_TRICV6.480e-9876.63Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A7S2M061_9STRA2.660e-9776.63Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A484DXY6_BRELC2.670e-9678.01DNA helicase n=1 Tax=Bremia lactucae TaxID=4779 Re... [more]
A0A7S0FJQ4_9STRA2.970e-9675.00Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A2U1MI62_ARTAN2.270e-9577.14RAD3-like DNA-binding helicase protein n=1 Tax=Art... [more]
A0A8J9X831_PHATR1.590e-9475.69Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S2P3V6_9STRA3.240e-9480.43General transcription and DNA repair factor IIH he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006555ATP-dependent helicase, C-terminalSMARTSM00491Cxpdneu3coord: 1..132
e-value: 2.8E-57
score: 206.3
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 9..143
e-value: 1.6E-33
score: 116.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..147
e-value: 4.6E-36
score: 125.9
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 1..187
IPR001945RAD3/XPD familyPANTHERPTHR11472:SF1GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPDcoord: 1..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8374contigP-wetherbeei_contig8374:1850..2419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8374.2.1mRNA_P-wetherbeei_contig8374.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8374 1850..2446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8374.2.1 ID=prot_P-wetherbeei_contig8374.2.1|Name=mRNA_P-wetherbeei_contig8374.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=190bp
MGVLKRVLEKKLVFIETKDVVETTLALDNFKRACDCGRGAIFFSVARGKV
AEGIDFDRHYGRAVVLFGVPFQYTLSHTLRARLEYLRTKFQIREGDFLTF
DALRQAAQCVGRVIRSKTDYGLMVFADSRYNRHDKRSKLPQWILQFLDES
HLNLSVDTAVAVTKQFLREMAQPVDREVLKTILLDKGAVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C
IPR027417P-loop_NTPase
IPR045028DinG/Rad3-like
IPR001945RAD3/XPD