prot_P-wetherbeei_contig8246.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8246.1.1
Unique Nameprot_P-wetherbeei_contig8246.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length708
Homology
BLAST of mRNA_P-wetherbeei_contig8246.1.1 vs. uniprot
Match: A0A6S7G7N1_PARCT (RNA-directed DNA polymerase from transposon BS n=6 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G7N1_PARCT)

HSP 1 Score: 159 bits (403), Expect = 9.690e-38
Identity = 130/476 (27.31%), Postives = 230/476 (48.32%), Query Frame = 0
Query:  229 KGRVHCTFCKGSVQGTKQEVKQHIKTDKHKMQKGNHTLKEAANETLNKHMLELKEQLVS--------GSSLTPDTIKLRMRVVQVFAESGTPLHRVPYFRPLLEELSGLRLTDVSELRRMVPNLLKIEENRLSEELAGKKVAIVFDGTTRTHEVFAVVARFMDGDGRVQQRLIEQAFYKAAFNAGDLAR-VIAFKLMKWDVEYDDVIAFISDRCATNLAAIGALKPFYRSAMMIGCESHTFDNCGKKIVDAKVVDQYLAV-VGLVGHSHKMREYFKVEVGSAPPMYCQTRRWSRRELLQWIMDNWDRLGTALVKAFSENLSQGAFITRLAEFHSKPEPRSEINRAYCRVQGMGVLVFTKPLVEATYQLESDGPLSLFAFEIIDRVAVDIKERFPTLAYPELQKTVADLCAGD-PEY--SKALLDNIKSVLMPAKDYFHAKIIV--ELKPQLDLFEAAALTNPQYMQRTDPFVADVE 689
            KG   C  C+  +   +  +  HI T KH    G   L + A     K   +L E L +        G +L+ +T   R++VV  F ++G  ++++  FR +LEE S  +LTD + + +++P + + E+    EEL G++++IVFDGTTR  E   ++ RF+D + ++QQRL+       +    ++AR +I+    ++ V  +  +A + DR + N  A+  +K  + + + IGC SHT ++ G+K  D  V+ +++   V L  HS   +  +K   G +   Y  TR WS+ E ++  +  +    TA + A  +  +  A   +L +  +  E + +I  A     G       +P V+ TY LE DGPL L A++ I    ++++     +  P + +  ++L A D P+    +   D     + P  +YF         L   L  F+AA L +P+ +    P VADV+
Sbjct:   56 KGAFFCEACREEISVKRSTIINHINTHKHLS--GKEKLHQKA-----KRERDLAEVLRAYDEENHPIGETLSMNTRVFRLKVVTAFMKAGIAINKINCFRSILEE-SAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTRLGEALVIIVRFLDSEWKIQQRLLRFLLLAKSLAGEEVAREIISVLAREYGVATELPVATMRDRASVNNVAVRTIKVIFPNILDIGCFSHTLEHVGEKF-DTPVLTKFIKHWVSLFAHSPHAKLLWKDRTGKSITTYSPTRWWSQWECIKQDLFLFYPHVTAFLTANRDTGTAPATTRKLLDIIANSEAKLKIEIAATVNAG-------EPFVKKTYSLEGDGPLVLEAYDAI----IELENCVRLMHMPNVTQISSELAATDGPDQRDQEQWQDYACQCVQPGFNYFLDTFANADNLSQPLSCFKAAWLVDPKRVNDLVPTVADVK 511          
BLAST of mRNA_P-wetherbeei_contig8246.1.1 vs. uniprot
Match: A0A6S7HVZ4_PARCT (RNA-directed DNA polymerase from transposon BS n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HVZ4_PARCT)

HSP 1 Score: 150 bits (380), Expect = 9.140e-36
Identity = 113/412 (27.43%), Postives = 204/412 (49.51%), Query Frame = 0
Query:  229 KGRVHCTFCKGSVQGTKQEVKQHIKTDKHKMQKGNHTLKEAANETLNKHMLELKEQLVS--------GSSLTPDTIKLRMRVVQVFAESGTPLHRVPYFRPLLEELSGLRLTDVSELRRMVPNLLKIEENRLSEELAGKKVAIVFDGTTRTHEVFAVVARFMDGDGRVQQRLIEQAFYKAAFNAGDLAR-VIAFKLMKWDVEYDDVIAFISDRCATNLAAIGALKPFYRSAMMIGCESHTFDNCGKKIVDAKVVDQYLAV-VGLVGHSHKMREYFKVEVGSAPPMYCQTRRWSRRELLQWIMDNWDRLGTALVKAFSENLSQGAFITRLAEFHSKPEPRSEINRAYCRVQGMGVLVFTKPLVEATYQLESDGPLSLFAFEIIDRVAVDIKERFPTLAYPELQKTVADLCAGD 630
            KG   C  C+  +   +  +  HI T KH    G   L + A     K   +L E L +        G +L+ +T   R++VV  F ++G  ++++  FR +LEE S  +LTD + + +++P + + E+    EEL G++++IVFDGTTR  E   ++ RF+D + ++QQRL+       +    ++AR +I+    ++ V  +  +A + DR + N  A+  +K  + + + IGC SHT ++ G+K  D  V+ +++   V L  HS   +  +K   G +   Y  TR WS+ E ++  +  +    TA + A  +  +  A   +L +  +  E + +I  A     G       +P V+ TY LE DGPL L A++ I    ++++     +  P + +  ++L A D
Sbjct:   39 KGAFFCEACREEISVKRSTIINHINTHKHLS--GKEKLHQKA-----KRERDLAEVLRAYDEENHPIGETLSMNTRVFRLKVVTAFMKAGIAINKINCFRSILEE-SAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTRLGEALVIIVRFLDSEWKIQQRLLRFLLLAKSLAGEEVAREIISVLAREYGVATELPVATMRDRTSVNNVAVRTIKVIFPNILDIGCFSHTLEHVGEKF-DTPVLTKFIKHWVSLFAHSPHAKLLWKDRTGKSLTTYSPTRWWSQWECIKQDLFLFYPHVTAFLTANRDTGTAPATTRKLLDIIANSEAKLKIEIAATVDAG-------EPFVKKTYSLEGDGPLVLEAYDAI----IELENCVRLMHMPNVTQISSELAATD 430          
BLAST of mRNA_P-wetherbeei_contig8246.1.1 vs. uniprot
Match: A0A6S7KMY7_PARCT (RNA-directed DNA polymerase from transposon BS (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KMY7_PARCT)

HSP 1 Score: 149 bits (376), Expect = 5.370e-35
Identity = 112/408 (27.45%), Postives = 201/408 (49.26%), Query Frame = 0
Query:  288 GSSLTPDTIKLRMRVVQVFAESGTPLHRVPYFRPLLEELSGLRLTDVSELRRMVPNLLKIEENRLSEELAGKKVAIVFDGTTRTHEVFAVVARFMDGDGRVQQRLIEQAFYKAAFNAGDLARVIAFKLMKWDVEYDDVIAFISDRCATNLAAIGALKPFYRSAMMIGCESHTFDNCGKKIVDAKVVDQYLAV-VGLVGHSHKMREYFKVEVGSAPPMYCQTRRWSRRELLQWIMDNWDRLGTALVKAFSENLSQGAFITRLAEFHSKPEPRSEINRAYCRVQGMGVLVFTKPLVEATYQLESDGPLSLFAFEIIDRVAVDIKERFPTLAYPELQKTVADLCAGD-PEY--SKALLDNIKSVLMPAKDYFHAKIIV--ELKPQLDLFEAAALTNPQYMQRTDPFVADVE 689
            G +L+ +T   R++VV  F ++G  ++++  FR +LEE S  +LTD + + +++P + + E+    EEL G++++IVFDGTTR  E   ++ RF+D + ++QQRL+       +    ++AR              ++I+ ++   + N  A+  +K  + + + IGC SHT D+ G+K  D  V+ +++   V L  HS   +  +K   G +   Y  TR WS+ E ++  +  +    TA + A S+  +  A   +L +  +  E + +I  A     G       +P V+ TY LE DGPL L A + I    ++++     +  P + +  ++L A D P+    +   D     + P  +YF         L   L  F+AA L +P+ +    P VADV+
Sbjct:   50 GETLSMNTRVFRLKVVTAFMKAGIAINKINCFRSILEE-SAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTRLGEALVIIVRFLDSEWKIQQRLLRFLLLAKSLAGEEVAR--------------EIISVLAREASVNNVAVRTIKVIFPNILDIGCFSHTLDHVGEKF-DTPVLTKFIKHWVSLFAHSPHAKLLWKDRTGKSLTTYSPTRWWSQWECIKQDLFLFYPHVTAFLTANSDTGTAPATTRKLLDIIANSEAKLKIEIAATVDAG-------EPFVKKTYSLEGDGPLVLEAHDAI----IELENCVRLMHMPNVTQISSELAATDGPDQRDQEQWQDYACQCVQPGFNYFLDTFANADNLSQPLSCFKAARLVDPRRVNDLVPTVADVK 430          
BLAST of mRNA_P-wetherbeei_contig8246.1.1 vs. uniprot
Match: A0A2B4RQL6_STYPI (Protein sidekick-2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQL6_STYPI)

HSP 1 Score: 137 bits (344), Expect = 2.050e-29
Identity = 117/469 (24.95%), Postives = 205/469 (43.71%), Query Frame = 0
Query:  230 GRVHCTFCKGSVQGTKQEVKQHIKTDKHKMQKGNHTLKEAANETLNKHMLELKEQ-LVSGSSLTPDTIKLRMRVVQVFAESGTPLHRVPYFRPLLEELSGLRLTDVSELRRMVPNLLKIEENRLSEELAGKKVAIVFDGTTRTHEVFAVVARFMDGDGRVQQRLIEQAFYKAAFNAGDLARVIAFKL-MKWDVEYDDVIAFISDRCATNLAAIGALKPFYRSAMMIGCESHTFDNCGKKIVDAKVVDQYLAVVGLVGHSHKMREYFKVEVGSAPPMYCQTRRWSRRELLQWIMDNWDRLGTALVKAFSENLS--QGAFITRLAEFHSKPEPRSEINRAYCRVQGMGVLVFTKPLVEATYQLESDGPLSLFAFEIIDRVAVDIKERFPTLAYPELQKTVADLCAGDPEYSKALLDNIKSVLMPAKDYFHAKIIV---ELKPQLDLFEAAALTNPQYMQRTDPFVADVEAT 691
            G+  C  C   +   K  ++ H+K+ KH   K     KEA    + K + E   Q L  G SL+       ++VV+ F ++G PLH++  FR LLEE     LT    L   +  + K E  ++ EE+ G+ V+I+FDGTT   +   ++ RF+  + +V Q+LI         N  +LA  +   L + + +    ++A   DR +                                  +AK +  +   VGL  HS + R  FK   G  P  Y +TR WS+ E++  + D            F + ++  +G  I  +     +     +   A  +V+    +   KP V++TYQLE DG L L A++I+ ++  +++     L +P     + ++  G+    +       + + PA DYF +  +    +L+P +++F+AA L NP         +A+++AT
Sbjct: 1731 GQAFCNACCEQIGLKKTLIENHVKSSKHASGKERLEKKEARERDIAKSLKEYDNQFLPKGESLSVALRVYTVKVVRSFMKAGVPLHKIDCFRELLEE-EAFSLTSSRHLSDFIDVIAKDERKKVKEEIEGRDVSIIFDGTTHVAKALNIILRFVT-EWKVHQQLIRLLLVTKPMNGEELAHQLLSTLSVDFSIPPSSLLAAARDRASVKN-------------------------------EAKFMKSW---VGLFAHSARSRNAFKETTGQFPNSYLETRWWSKYEMMVQVHD-----------LFGDTIAFVKGDQIPEVTARKLQDILNDQQKLASLKVEFAITVDAMKPFVQSTYQLEGDGSLCLQAYQIVRKLEAEMRN----LHFPNCCAVIRNIANGNIALQRQSEGYAMACIQPAYDYFTSTFLNNGDQLQPAVEVFKAARLFNPTK-------IAEIQAT 2141          
BLAST of mRNA_P-wetherbeei_contig8246.1.1 vs. uniprot
Match: A0A6S7JYZ8_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JYZ8_PARCT)

HSP 1 Score: 93.6 bits (231), Expect = 5.760e-17
Identity = 68/237 (28.69%), Postives = 118/237 (49.79%), Query Frame = 0
Query:  229 KGRVHCTFCKGSVQGTKQEVKQHIKTDKHKMQKGNHTLKEAANETLNKHMLELKEQLVS--------GSSLTPDTIKLRMRVVQVFAESGTPLHRVPYFRPLLEELSGLRLTDVSELRRMVPNLLKIEENRLSEELAGKKVAIVFDGTTRTHEVFAVVARFMDGDGRVQQRLIEQAFYKAAFNAGDLARVIAFKLMKWDV--------EYDDVIAFISDRCATNLAA-IGALKPFYR 448
            KG   C  C+  +   +  +  HI T KH    G   L + A     K   +L E L +        G +L+ +T   R++VV  F ++G  ++++  FR +LEE S  +LTD + + +++P + + E+    EEL G++++IVFDGTTR  E   ++ RF+D + ++QQRL+       +    ++AR I   L + D         +  D+IA    +    +AA + A +PF +
Sbjct:   56 KGAFFCEACREEISVKRSTIINHINTHKHLS--GKEKLHQKA-----KRERDLAEVLRAYDEENHPIGETLSMNTRVFRLKVVTAFMKAGIAINKINCFRSILEE-SAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTRLGEALVIIVRFLDSEWKIQQRLLRFLLLAKSLAGEEVAREIISVLAREDTGTAPATTRKLLDIIANSEAKLKIEIAATVDAGEPFVK 284          
BLAST of mRNA_P-wetherbeei_contig8246.1.1 vs. uniprot
Match: A0A836CBB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 6.930e-10
Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 0
Query:  186 PPAGVRGAGRSAKPKILLSQGSIRALLKDKRLQDEGLHPDV--ANKGRVHCTFCKGSVQGTKQEVKQHIKTDKHKMQKGNHTLKEAANETLNKHMLE-LKEQLVSGSSLTPDTIKLRMRVVQVFAESGTPLHRVPY-FRPLLEELSGLRLTDVSELRRMVPNLLKIEENRLSEELAGKKVAIVFDGTTRTHEVFAVVARFMDGDGRVQ 389
            PP G+R    + K ++ +S   +   +K+        HPDV  A+ GR+ C  CK  +   K  V +HI   KH         K A  +T ++ + E   E    G+SLT      R+  +++   S  PLH++    R  LE   G  LT+ S +  ++P +L+ E   L +E+AG+K++++FDGTTR      +    +  D  +Q
Sbjct:   73 PPVGIR----TGKRRMQVSAKQVAKRIKE--------HPDVLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALER-GGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVLVTLLMTTLAVKADDVIQ 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8246.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6S7G7N1_PARCT9.690e-3827.31RNA-directed DNA polymerase from transposon BS n=6... [more]
A0A6S7HVZ4_PARCT9.140e-3627.43RNA-directed DNA polymerase from transposon BS n=1... [more]
A0A6S7KMY7_PARCT5.370e-3527.45RNA-directed DNA polymerase from transposon BS (Fr... [more]
A0A2B4RQL6_STYPI2.050e-2924.95Protein sidekick-2 n=1 Tax=Stylophora pistillata T... [more]
A0A6S7JYZ8_PARCT5.760e-1728.69Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A836CBB9_9STRA6.930e-1028.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..137
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 352..531

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8246contigP-wetherbeei_contig8246:238..2861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8246.1.1mRNA_P-wetherbeei_contig8246.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8246 238..2861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8246.1.1 ID=prot_P-wetherbeei_contig8246.1.1|Name=mRNA_P-wetherbeei_contig8246.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=708bp
GSHHACDKCGCPMHAFCGFDVLDADGDVMEGFGAPRRCGVCNATASTRAP
TVEDMIGDSDDEEEVSTILHGGSAFFSTAIPLYSLAKGSKKRNAFTTLMG
SPAGKKKATAQERQACKEEAGAHDAVIRSDKARERKQRAPLKRAKTAAMA
GEKDGGESDAAADDGPGEEGAASADASSAASSRAKPPAGVRGAGRSAKPK
ILLSQGSIRALLKDKRLQDEGLHPDVANKGRVHCTFCKGSVQGTKQEVKQ
HIKTDKHKMQKGNHTLKEAANETLNKHMLELKEQLVSGSSLTPDTIKLRM
RVVQVFAESGTPLHRVPYFRPLLEELSGLRLTDVSELRRMVPNLLKIEEN
RLSEELAGKKVAIVFDGTTRTHEVFAVVARFMDGDGRVQQRLIEQAFYKA
AFNAGDLARVIAFKLMKWDVEYDDVIAFISDRCATNLAAIGALKPFYRSA
MMIGCESHTFDNCGKKIVDAKVVDQYLAVVGLVGHSHKMREYFKVEVGSA
PPMYCQTRRWSRRELLQWIMDNWDRLGTALVKAFSENLSQGAFITRLAEF
HSKPEPRSEINRAYCRVQGMGVLVFTKPLVEATYQLESDGPLSLFAFEII
DRVAVDIKERFPTLAYPELQKTVADLCAGDPEYSKALLDNIKSVLMPAKD
YFHAKIIVELKPQLDLFEAAALTNPQYMQRTDPFVADVEATLWRLVQHAS
AIVDADGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf