prot_P-wetherbeei_contig7910.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7910.2.1
Unique Nameprot_P-wetherbeei_contig7910.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length223
Homology
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: A0A363TEV0_9BRAD (GntR family transcriptional regulator n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TEV0_9BRAD)

HSP 1 Score: 259 bits (663), Expect = 6.910e-84
Identity = 132/222 (59.46%), Postives = 168/222 (75.68%), Query Frame = 0
Query:    3 ATAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATR-VTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAIANCLPVPLVEGARESRRAA 223
            +TA+  AY+++QDQIVSG + GGSRL+PE +++ LGISRMPVREAIRQL+AEGYVT+R NRG +VTSRTP++++ELFE+R+ LE LA  +AA   V    I +L + LARLR+L  + VAWV+ HD FHD+LC LS RQ LC EI+RLRLA++PYLR Y + H  PEI GHEHE IL+A++S + KRAE VMRAHVMANA  IA C+P    +   E  R A
Sbjct:   46 STAQHLAYIHLQDQIVSGALPGGSRLKPEALAQTLGISRMPVREAIRQLNAEGYVTIRPNRGAIVTSRTPEEILELFEMRAVLEALAARIAADAGVAPEAIDDLELFLARLRRLRHDHVAWVERHDEFHDLLCALSGRQRLCMEIRRLRLAVRPYLRLYLRTHAEPEIAGHEHERILDAIRSRNGKRAETVMRAHVMANAHGIAECIPTSRADLGSEPARTA 267          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: A0A1F4FIP9_9PROT (HTH gntR-type domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FIP9_9PROT)

HSP 1 Score: 232 bits (592), Expect = 4.760e-74
Identity = 117/205 (57.07%), Postives = 154/205 (75.12%), Query Frame = 0
Query:    4 TAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAIANCL 208
            +++QQAY+Y+QD+IVSGV+ GG+RL PE I+  LGISRMPVREAIRQL AEGYVT+R NRG +VTSRT  +V ELFEIR+ALEG AL L A RV+   + +L++EL RLR +  +  +W++ HDAFHD LC  S R  L AE +R RLA++PY+R Y +     E  G EHE +++AL+ GD + AER+ R+H+MANA+AIA CL
Sbjct:   13 SSQQQAYVYLQDRIVSGVLTGGTRLIPETIATELGISRMPVREAIRQLDAEGYVTIRPNRGAVVTSRTRHEVAELFEIRAALEGTALRLGAARVSADMLADLDIELKRLRSVGTDHASWLERHDAFHDDLCRTSGRLQLEAECRRYRLAVRPYMRRYLQSGQTFEQPGFEHERLIDALRGGDGELAERMARSHIMANADAIAQCL 217          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: UPI00066150C1 (GntR family transcriptional regulator n=1 Tax=Microvirga massiliensis TaxID=1033741 RepID=UPI00066150C1)

HSP 1 Score: 209 bits (532), Expect = 9.000e-65
Identity = 103/204 (50.49%), Postives = 147/204 (72.06%), Query Frame = 0
Query:    1 DFATAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAI 204
            D AT +Q AY +I++ I+SG    GS L+ E I++ L ISRMPVR+A+RQL +EG VT+R NRG  VT+ + + ++ELFEIRS LEGLA G+AATR TK++I+EL+  + ++ + +++   W++ HDA HD LC +S RQ LCA+I RLR  +KPYL  Y+  H +PE+ GHEH   LE L++   + AER++RAHV+ANA +I
Sbjct:    4 DDATPQQLAYNFIREGILSGKFTAGSWLKTESIAQQLDISRMPVRDALRQLDSEGLVTIRLNRGATVTNLSLEDILELFEIRSVLEGLAAGIAATRATKSHIEELDFLVQQMERAKSDRTRWIERHDAVHDYLCGISGRQELCAQISRLRTRVKPYLLMYSVAHGDPELAGHEHWRFLEPLRNQQTEEAERIVRAHVIANAHSI 207          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: A0A521Z596_9PROT (GntR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z596_9PROT)

HSP 1 Score: 207 bits (528), Expect = 1.230e-64
Identity = 107/196 (54.59%), Postives = 142/196 (72.45%), Query Frame = 0
Query:   13 IQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAIANCL 208
            + ++IVSGV+ GG+RL PE I+  LGISRMPVREAIRQL AEGYVT+R NRG +VT RT +++ ELFEIR+ALEG AL L A  V+   + +L++EL RLR +  +  +W + HD  HD LC  S R  L AE +R RLA++PY+R Y +   N E  G EHE +++AL+SGD + AER+ R+H+MANA+AIA CL
Sbjct:    1 MHERIVSGVLSGGTRLIPEAIAAELGISRMPVREAIRQLDAEGYVTIRPNRGAVVTLRTGREITELFEIRAALEGAALRLGAGTVSAEALADLDIELKRLRNVGTDHASWHERHDDLHDRLCRTSGRLQLEAECRRYRLAVRPYMRLYLQSGRNFEQPGFEHEHLIDALRSGDGELAERMARSHIMANADAIAQCL 196          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: UPI001C236DC5 (GntR family transcriptional regulator n=1 Tax=Roseomonas oleicola TaxID=2801474 RepID=UPI001C236DC5)

HSP 1 Score: 195 bits (496), Expect = 1.440e-59
Identity = 97/209 (46.41%), Postives = 141/209 (67.46%), Query Frame = 0
Query:    4 TAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAIANCLPVPL 212
            +A++    Y++++I+SG +  GSR+RPE+++  LG+SRMPVREA+ QL AEG VTLR NRG LVT    + ++E+FE+R+ LEGL    AA   T  +I+EL+ E   +R++  +   WV+ H+AFHD LC L DR    AE +RLRL ++P LR +A    +PE  GHEHE I++AL+ GD +RAE++   HV ANA A+   +P P+
Sbjct:    5 SAQELCLGYLREEILSGRLPPGSRIRPEQVATHLGLSRMPVREALHQLDAEGLVTLRPNRGALVTELNRRDLMEIFEMRALLEGLCARHAARLATPADIEELDAEAQAMRRVARDPARWVERHEAFHDRLCLLGDRPRAAAEARRLRLLVRPLLRGFAAVERDPETLGHEHEVIVDALRDGDARRAEKLAVLHVNANAHALLGLIPAPV 213          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: A0A6I7P4X0_9PROT (GntR family transcriptional regulator n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7P4X0_9PROT)

HSP 1 Score: 192 bits (488), Expect = 1.040e-57
Identity = 99/203 (48.77%), Postives = 136/203 (67.00%), Query Frame = 0
Query:    4 TAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAIAN 206
            TA Q AY +++D+I+SG    G RLR E I+  +G+SRMPVREA+ QL AEG +T   NRG +V+  TP++V+ELFEIR+ LEGLA  LA    T+  + +L+  LAR+R  E + + W+D HD  HD +C LS R  LC   ++LR+ I+PYLR +   H +PE+ G  H+ IL AL++ D  RAE  MR HVMANA+ IA+
Sbjct:   36 TAHQLAYEFLRDRILSGHYKPGVRLRAEHIAAEIGVSRMPVREAVLQLDAEGLLTTLPNRGVVVSRLTPEEVVELFEIRAPLEGLATRLAVEHATEEALLDLDHCLARMRLAEGDHLLWIDRHDELHDRICRLSHRDRLCQLARQLRMQIQPYLRLFTSAHHSPELTGFGHDVILAALRARDADRAEAAMREHVMANAQEIAS 238          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: UPI001F3B9416 (GntR family transcriptional regulator n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=UPI001F3B9416)

HSP 1 Score: 180 bits (457), Expect = 1.640e-53
Identity = 89/194 (45.88%), Postives = 132/194 (68.04%), Query Frame = 0
Query:    4 TAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHV 197
            +A+QQAY YI+DQIV G + GG+++ P EI++ LGISRMPVREA+ QL AEG VT R NRG +VT   P+ V ELF++R+ALEGLA   AA + T+ ++ EL +   R+ +   ++  W+ HHD FHD +C +  R  L AEI+R+R ++ PYL  Y + +  PE++G EH  +++AL++ +   AER +  H+
Sbjct:   11 SAQQQAYRYIRDQIVGGAIPGGTKIVPSEIAEVLGISRMPVREALVQLDAEGLVTNRPNRGAIVTPLKPEDVEELFQMRAALEGLAARHAAVKCTEMHLHELEIMAGRMDRAADDAQLWLRHHDEFHDYMCSIPGRARLLAEIRRIRASVHPYLLLYNRVYDRPEMEGAEHRALIDALRTKNGTLAERAVSHHI 204          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: UPI00143A9D53 (GntR family transcriptional regulator n=1 Tax=Falsiroseomonas selenitidurans TaxID=2716335 RepID=UPI00143A9D53)

HSP 1 Score: 179 bits (455), Expect = 2.730e-53
Identity = 90/201 (44.78%), Postives = 132/201 (65.67%), Query Frame = 0
Query:    4 TAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAI 204
            TA++    ++++ I+SG +  G R+RPE ++  LG+SRMPVREA+ QL AEG VTLR NRG +V      +V E++E+R+ LEGL    AA R T  +I+EL+  +  + ++  +   WVD H+AFHD LC L  R    AE +RLRL ++P LR +A    +PE  GHEH+ I++AL+  D +RAER++ AHV ANA ++
Sbjct:    5 TAQELCLAHLREAILSGRLAPGERIRPEAVAAELGLSRMPVREALHQLEAEGLVTLRPNRGAVVVQLAAAEVQEIYEMRALLEGLCARHAARRATPADIEELDAAVQAMLRVAGDPARWVDRHEAFHDRLCLLGGRLRAAAEARRLRLLLRPLLRSFAAEERDPETLGHEHDVIVDALRDRDARRAERLVVAHVNANAVSV 205          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: A0A1Y5TTT1_9PROT (Putative HTH-type transcriptional regulator YdfH n=2 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5TTT1_9PROT)

HSP 1 Score: 171 bits (432), Expect = 1.160e-49
Identity = 89/195 (45.64%), Postives = 130/195 (66.67%), Query Frame = 0
Query:    4 TAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVM 198
            +A+Q+AY +I+D+I+SG + GG++L P  I+  LGISRMPVREA+ QL AEG VT R NRG +VTS T   V ELFEIR+ALEG+A   AATR T ++++EL     R+ +  A+  AW+  HD FHD+LC +  R  L  +I++ R ++ PYL  Y   +   E++G EH+ +L ALQ+ +    ER++  H++
Sbjct:   11 SAQQRAYAFIKDRIMSGSIQGGAKLNPVSIADQLGISRMPVREALLQLDAEGLVTNRPNRGAIVTSLTADDVEELFEIRAALEGVAARHAATRFTPSDMEELQALSMRMNRPMADVRAWLKIHDQFHDVLCSIGARPRLLNDIRKTRTSVHPYLLLYISVYNETEMEGAEHDSLLSALQTRNALLVERIVTDHIL 205          
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Match: A0A7V2MUX0_9BACT (GntR family transcriptional regulator n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V2MUX0_9BACT)

HSP 1 Score: 167 bits (422), Expect = 2.850e-48
Identity = 88/207 (42.51%), Postives = 129/207 (62.32%), Query Frame = 0
Query:    2 FATAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQLSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKTNIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLRLAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMANAEAIANCL 208
            + TAE +AY Y+++ I+SG + G +R+   ++++ LG+SRMPVR A+RQL AEG VT+R NRG +VT  T  +V E+FE+R+ LEGLA  +A   +     ++L + L R+ +   N   W+  HD FHD +   S R  L  + Q LR A++PY+R +   + + E+ G EH  +LE L++GDP  AER MRAHV A A  I   L
Sbjct:    8 YKTAEIEAYEYLREAILSGELPGDTRIDIPQVARRLGMSRMPVRAALRQLDAEGLVTIRPNRGVVVTKLTAAEVFEIFEMRAVLEGLAARVAVPNLDAEAFEDLELLLTRMDRSRGNLGRWLRCHDEFHDAIVRRSGRPRLVTQTQLLRRAVEPYIRVHVGAYAHEEMPGAEHTSLLEVLRAGDPLAAERAMRAHVEAAATHIVEFL 214          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7910.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A363TEV0_9BRAD6.910e-8459.46GntR family transcriptional regulator n=1 Tax=Brad... [more]
A0A1F4FIP9_9PROT4.760e-7457.07HTH gntR-type domain-containing protein n=1 Tax=Be... [more]
UPI00066150C19.000e-6550.49GntR family transcriptional regulator n=1 Tax=Micr... [more]
A0A521Z596_9PROT1.230e-6454.59GntR family transcriptional regulator n=1 Tax=Beta... [more]
UPI001C236DC51.440e-5946.41GntR family transcriptional regulator n=1 Tax=Rose... [more]
A0A6I7P4X0_9PROT1.040e-5748.77GntR family transcriptional regulator n=1 Tax=Gemi... [more]
UPI001F3B94161.640e-5345.88GntR family transcriptional regulator n=1 Tax=Zava... [more]
UPI00143A9D532.730e-5344.78GntR family transcriptional regulator n=1 Tax=Fals... [more]
A0A1Y5TTT1_9PROT1.160e-4945.64Putative HTH-type transcriptional regulator YdfH n... [more]
A0A7V2MUX0_9BACT2.850e-4842.51GntR family transcriptional regulator n=1 Tax=Cand... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000524Transcription regulator HTH, GntRSMARTSM00345gntr3coord: 9..67
e-value: 2.6E-9
score: 46.9
IPR000524Transcription regulator HTH, GntRPFAMPF00392GntRcoord: 7..65
e-value: 3.3E-14
score: 52.3
IPR000524Transcription regulator HTH, GntRPROSITEPS50949HTH_GNTRcoord: 3..70
score: 17.987347
IPR000524Transcription regulator HTH, GntRCDDcd07377WHTH_GntRcoord: 7..68
e-value: 3.07423E-16
score: 68.628
IPR011711GntR, C-terminalSMARTSM00895FCD_2coord: 77..199
e-value: 3.0E-19
score: 80.0
IPR011711GntR, C-terminalPFAMPF07729FCDcoord: 77..197
e-value: 1.4E-21
score: 77.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..68
e-value: 1.9E-18
score: 67.8
IPR008920Transcription regulator FadR/GntR, C-terminalGENE3D1.20.120.530coord: 71..209
e-value: 2.6E-28
score: 100.9
IPR008920Transcription regulator FadR/GntR, C-terminalSUPERFAMILY48008GntR ligand-binding domain-likecoord: 73..204
NoneNo IPR availablePANTHERPTHR43537:SF34PYRUVATE DEHYDROGENASE COMPLEX REPRESSORcoord: 7..206
NoneNo IPR availablePANTHERPTHR43537TRANSCRIPTIONAL REGULATOR, GNTR FAMILYcoord: 7..206
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 6..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7910contigP-wetherbeei_contig7910:1811..2479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7910.2.1mRNA_P-wetherbeei_contig7910.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7910 1811..2479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7910.2.1 ID=prot_P-wetherbeei_contig7910.2.1|Name=mRNA_P-wetherbeei_contig7910.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp
DFATAEQQAYLYIQDQIVSGVMVGGSRLRPEEISKALGISRMPVREAIRQ
LSAEGYVTLRANRGPLVTSRTPQQVIELFEIRSALEGLALGLAATRVTKT
NIQELNVELARLRKLEANSVAWVDHHDAFHDMLCHLSDRQYLCAEIQRLR
LAIKPYLRHYAKGHTNPEIKGHEHEFILEALQSGDPKRAERVMRAHVMAN
AEAIANCLPVPLVEGARESRRAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000524Tscrpt_reg_HTH_GntR
IPR011711GntR_C
IPR036388WH-like_DNA-bd_sf
IPR008920TF_FadR/GntR_C
IPR036390WH_DNA-bd_sf