prot_P-wetherbeei_contig7890.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7890.1.2
Unique Nameprot_P-wetherbeei_contig7890.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length256
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7890.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 73..105
e-value: 2.0E-5
score: 34.0
coord: 36..68
e-value: 1.2E-5
score: 34.8
coord: 1..31
e-value: 42.0
score: 13.0
coord: 110..142
e-value: 1.1E-4
score: 31.5
coord: 147..178
e-value: 0.48
score: 19.5
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 105..178
e-value: 5.2E-11
score: 42.1
coord: 4..154
e-value: 1.9E-24
score: 86.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 1..168
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 1..204
e-value: 1.1E-42
score: 148.0
NoneNo IPR availablePANTHERPTHR13068:SF151TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTICcoord: 1..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7890contigP-wetherbeei_contig7890:824..2721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7890.1.2mRNA_P-wetherbeei_contig7890.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7890 328..2730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7890.1.2 ID=prot_P-wetherbeei_contig7890.1.2|Name=mRNA_P-wetherbeei_contig7890.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
MVLKLPSLLWYTVDGNMKPKVEYLRGFLGLSAETAGRLLVKTPQLFSYSI
DGGIRPKVAYFVEELGFSQEEVGAIVARSPQILGYSVEENVKPKVLFLQR
ALRASTNQVREMLLKYPNLLNLSVSNNIEPKVKFFQEVLGGSVEEVRAAV
LATPNLLGYSMERRIVPRVLALRGVGVAPLSFAEHHWHVTSYTDKRFRDW
LRRKISEIHKDEPEQEQRALMKRAVELMNLMATETTLTAAVGNNDAVVAA
MAGRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf