prot_P-wetherbeei_contig7508.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7508.1.1
Unique Nameprot_P-wetherbeei_contig7508.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length537
Homology
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BLAST of mRNA_P-wetherbeei_contig7508.1.1 vs. uniprot
Match: K0RWQ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RWQ5_THAOC)

HSP 1 Score: 72.4 bits (176), Expect = 1.580e-9
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:  186 WMGSHDEYCYVCFAGGKLLCCDFCSVAVHGKCLLPPRPRAPAGRWLCPQC 235
            + G HD+ CY+C+ GG LLCCD+CS A H KC LPP    P G W C +C
Sbjct:  686 FKGEHDDTCYMCYQGGDLLCCDYCSKAYHMKCHLPPLTEIPEGNWKCQEC 735
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BLAST of mRNA_P-wetherbeei_contig7508.1.1 vs. uniprot
Match: UPI001D0819DD (bromodomain adjacent to zinc finger domain protein 1A isoform X1 n=2 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D0819DD)

HSP 1 Score: 57.8 bits (138), Expect = 5.370e-5
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 0 
Query:  192 EYCYVCFAGGKLLCCDFCSVAVHGKCLLPPRPRAPAGRWLCPQC 235
            E C VC  GG+++CCD CS+  H +CL PP  R P G W C  C
Sbjct: 1153 EVCEVCKEGGRVICCDSCSIMYHPECLDPPLRRVPRGTWHCSDC 1196
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7508.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
K0RWQ5_THAOC1.580e-954.00Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
UPI001D0819DD5.370e-550.00bromodomain adjacent to zinc finger domain protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 193..236
e-value: 6.5E-10
score: 48.9
IPR009071High mobility group box domainPFAMPF09011HMG_box_2coord: 75..150
e-value: 2.5E-6
score: 28.0
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 75..149
score: 8.754848
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 187..243
e-value: 7.0E-14
score: 53.2
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 74..150
e-value: 7.6E-10
score: 41.1
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 75..149
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 193..236
e-value: 4.0E-8
score: 33.0
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 191..238
score: 9.623499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..54
NoneNo IPR availableCDDcd00084HMG-boxcoord: 76..149
e-value: 1.37613E-8
score: 49.5395
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 194..235
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 185..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7508contigP-wetherbeei_contig7508:694..2948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7508.1.1mRNA_P-wetherbeei_contig7508.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7508 669..2948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7508.1.1 ID=prot_P-wetherbeei_contig7508.1.1|Name=mRNA_P-wetherbeei_contig7508.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=537bp
MVLISERQQLRMCLEITPLYPTTDDTLVEGAVVVAVADNRPKDDKHDVQE
KPKPVRKKTKGKAVRAEGTGRGIKLKGCRNAFLYYMSHRRKELAAAIRAG
SQDAAVLDLNCTHQQFSSKTAVAWRLLPAAVRRPFEAMAEADKVRYQQER
VMAALTGRQEVISAFQGCDGGGREIADGAAMPFGAWMGSHDEYCYVCFAG
GKLLCCDFCSVAVHGKCLLPPRPRAPAGRWLCPQCVVDAGAEAPPNVWAA
DAAVHVAAVADPAGAADAGAAAAGRVVASGAAAVAVAAALNPAAAATHAA
VGTRAAGALVAAPSADAGATGPAKSLMSAVRQSEAAAQRKACAATATPQA
TTAVPAPKLSRAPPPGAVSRTLLSRVSPPPATTALKAAPRAAPKATTVAT
AAAAANAKATTAAAPWREFELEAGSSRLKRDQDGVVENVVAARGEEPTAT
IGRPESKAAPPIPPGDKGRSAGIGNAQCREKPAGTAGLSAGGDRPAAQDG
VAFPAAVGGASTPKRKAEVNDPRDGGSNLNAGRRQRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR009071HMG_box_dom
IPR013083Znf_RING/FYVE/PHD
IPR036910HMG_box_dom_sf
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD