prot_P-wetherbeei_contig7440.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7440.1.1
Unique Nameprot_P-wetherbeei_contig7440.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length153
Homology
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BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: D8LKQ4_ECTSI (Poly(Rc) binding protien (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ4_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.120e-35
Identity = 82/154 (53.25%), Postives = 96/154 (62.34%), Query Frame = 0 
Query:    1 MLVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVLEDRTITCTGPFAAVGAAFGMILSHCGVIG--FGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISS 152
            +L+PN K+GAVIGKGG+I+K IRE SGAKVTISDSCT LH D  +DR +T  G F +V  AF  ILSH G +G      +GL GG                          PD + +  RLL+PN +AGGLIGRGG TIKAIRE SGARIEISS
Sbjct:  105 VLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDS-DDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGG-------------------------DPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISS 232
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BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A836CIH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH4_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.030e-21
Identity = 72/162 (44.44%), Postives = 87/162 (53.70%), Query Frame = 0 
Query:    1 MLVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVL---------EDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTL-GLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISS 152
            +L+PN K+GAVIGKGG+IVK IRE SGA+VTISD+     DD            +R +   G F AV AA G IL+H      G+ L GL     G                           P   R+L+PN++AG LIGRGG TIKAIR+ SGARIEISS
Sbjct:  110 VLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDA----GDDAGWAGGGGPGGGERLVHLVGSFGAVVAALGAILAHAETPSNGEPLPGLAQLVAGGLLSGEAAAAVDAAITVP---------PSAFRMLIPNAKAGALIGRGGTTIKAIRDASGARIEISS 258
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BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A835Z8V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.220e-19
Identity = 70/161 (43.48%), Postives = 86/161 (53.42%), Query Frame = 0 
Query:    1 MLVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVL---------EDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISS 152
            +L+PN K+GAVIGKGG+IVK IRE SGA+VTISD+     DD            +R +   G F AV  AFG IL+H      GD L   G                         L P G     R+L+ +++AG LIGR GATIKAIR+ SGARI+ISS
Sbjct:  298 VLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDA----GDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPL--PGLAALVASGMLSGEATSAAALEAALPLPPSGF----RMLISSAKAGALIGRAGATIKAIRDASGARIDISS 448
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BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A6H5L8U0_9PHAE (KH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8U0_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 7.620e-11
Identity = 48/106 (45.28%), Postives = 56/106 (52.83%), Query Frame = 0 
Query:   49 ITCTGPFAAVGAAFGMILSHCGVIG--FGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISS 152
            +T  G F +V  AF  ILSH G +G      +GL GG                          PD + +  RLL+PN +AGGLIGRGG TIKAIRE SGARIEISS
Sbjct:    2 VTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGG-------------------------DPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISS 82
[Close]
BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A7S3JWP9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWP9_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.560e-10
Identity = 48/154 (31.17%), Postives = 74/154 (48.05%), Query Frame = 0 
Query:    1 MLVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDD--VLEDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISS 152
            +L+PN KVG VIGKGG+++  IRE+S A + I++     ++   + ++R +T  G FAAV  AF M+  H  V                                    + P  L     +LVP ++ GGLIGR GA+I  +R  SGA +++ +
Sbjct:  160 LLIPNTKVGIVIGKGGAMINHIRESSKASLDIAEPGQQNNNQSALPQERVLTFNGDFAAVYTAFQMVQQHLSVA-------------------------SQQQDPNNSTVVPPSLIETT-ILVPRNKTGGLIGRSGASINRVRNDSGATVKVGA 287
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BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A553NSS8_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NSS8_TIGCA)

HSP 1 Score: 63.9 bits (154), Expect = 5.120e-9
Identity = 62/152 (40.79%), Postives = 82/152 (53.95%), Query Frame = 0 
Query:    1 MLVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVLEDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISS 152
            M++   +VG++IGKGG I+  IRE SGAK+ ISD         + +R +T TG   A+  AF +I        F +        GG       XXXXXXXXXX     G        RL+VP S+ G LIG+GG+ IK IRE SGA I+++S
Sbjct:   21 MIMSGKEVGSIIGKGGEIINNIREDSGAKIHISDGS-------VPERIVTVTGTTDAILKAFSLICKK-----FEED-------GGTRESPISXXXXXXXXXXTPKQTGV-----TLRLVVPASQCGSLIGKGGSKIKDIRETSGASIQVAS 148
[Close]
BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A397SEV4_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SEV4_9GLOM)

HSP 1 Score: 63.2 bits (152), Expect = 7.370e-9
Identity = 50/152 (32.89%), Postives = 67/152 (44.08%), Query Frame = 0 
Query:    2 LVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVLEDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISSQ 153
            LV   + G +IGKGG  V +IR+ SGAKVTIS+     ++     R +T TGP   V  AF ++          + L                               P+      RLLVP+SR G +IG+GG  IK I+E SGAR   S +
Sbjct:   30 LVTTKEAGVIIGKGGKNVSEIRDRSGAKVTISEMVQGAYE-----RILTVTGPLDTVAKAFALVARKI----LDENLDTPST--------------------------PNSKSTTIRLLVPHSRMGPVIGKGGCKIKEIQEKSGARCLASEE 146
[Close]
BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A1D1ZKD6_9ARAE (RNA-binding protein rnc1 n=9 Tax=Eukaryota TaxID=2759 RepID=A0A1D1ZKD6_9ARAE)

HSP 1 Score: 63.2 bits (152), Expect = 8.940e-9
Identity = 50/152 (32.89%), Postives = 67/152 (44.08%), Query Frame = 0 
Query:    2 LVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVLEDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISSQ 153
            LV   + G +IGKGG  V +IR+ SGAKVTIS+     ++     R +T TGP   V  AF ++          + L                               P+      RLLVP+SR G +IG+GG  IK I+E SGAR   S +
Sbjct:  105 LVTTKEAGVIIGKGGKNVSEIRDRSGAKVTISEMVQGAYE-----RILTVTGPLDTVAKAFALVARKI----LDENLDTPST--------------------------PNSKSTTIRLLVPHSRMGPVIGKGGCKIKEIQEKSGARCLASEE 221
[Close]
BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A2Z6S4Z1_9GLOM (Uncharacterized protein n=3 Tax=Rhizophagus TaxID=1129544 RepID=A0A2Z6S4Z1_9GLOM)

HSP 1 Score: 63.2 bits (152), Expect = 1.080e-8
Identity = 50/152 (32.89%), Postives = 67/152 (44.08%), Query Frame = 0 
Query:    2 LVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVLEDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISSQ 153
            LV   + G +IGKGG  V +IR+ SGAKVTIS+     ++     R +T TGP   V  AF ++          + L                               P+      RLLVP+SR G +IG+GG  IK I+E SGAR   S +
Sbjct:  105 LVTTKEAGVIIGKGGKNVSEIRDRSGAKVTISEMVQGAYE-----RILTVTGPLDTVAKAFALVARKI----LDENLDTPST--------------------------PNSKSTTIRLLVPHSRMGPVIGKGGCKIKEIQEKSGARCLASEE 221
[Close]
BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Match: A0A397ULE6_9GLOM (Uncharacterized protein n=3 Tax=Diversisporales TaxID=214509 RepID=A0A397ULE6_9GLOM)

HSP 1 Score: 62.0 bits (149), Expect = 2.280e-8
Identity = 49/152 (32.24%), Postives = 67/152 (44.08%), Query Frame = 0 
Query:    2 LVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVLEDRTITCTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGXXXXXXXXXXXXXXXXXXXXGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEISSQ 153
            LV   + G +IGKGG  V +IR+ SGAKVTIS+     ++     R +T TGP   V  AF ++          + L                               P+      RLLVP++R G +IG+GG  IK I+E SGAR   S +
Sbjct:  109 LVTTKEAGVIIGKGGKNVSEIRDRSGAKVTISEMVQGAYE-----RILTVTGPLDTVAKAFALVARKV----LDENLDTPST--------------------------PNSKSTTIRLLVPHTRMGPVIGKGGTKIKEIQEKSGARCLASEE 225
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7440.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKQ4_ECTSI1.120e-3553.25Poly(Rc) binding protien (Partial) (Fragment) n=1 ... [more]
A0A836CIH4_9STRA3.030e-2144.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8V5_9STRA9.220e-1943.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L8U0_9PHAE7.620e-1145.28KH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S3JWP9_9STRA4.560e-1031.17Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A553NSS8_TIGCA5.120e-940.79Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
A0A397SEV4_9GLOM7.370e-932.89Uncharacterized protein n=1 Tax=Glomus cerebriform... [more]
A0A1D1ZKD6_9ARAE8.940e-932.89RNA-binding protein rnc1 n=9 Tax=Eukaryota TaxID=2... [more]
A0A2Z6S4Z1_9GLOM1.080e-832.89Uncharacterized protein n=3 Tax=Rhizophagus TaxID=... [more]
A0A397ULE6_9GLOM2.280e-832.24Uncharacterized protein n=3 Tax=Diversisporales Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 1..70
e-value: 1.7E-7
score: 40.9
coord: 113..153
e-value: 7.8
score: 7.9
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 114..153
e-value: 4.8E-12
score: 47.5
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 1..69
e-value: 3.7E-17
score: 63.8
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 108..152
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 2..69
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 1..66
e-value: 3.2E-14
score: 52.5
coord: 117..151
e-value: 2.8E-10
score: 39.9
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 1..152
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 114..153
score: 14.340499
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1..65
score: 15.304806
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 116..152
e-value: 7.1777E-13
score: 57.8715
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 1..66
e-value: 2.14748E-16
score: 67.1163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7440contigP-wetherbeei_contig7440:1913..2371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7440.1.1mRNA_P-wetherbeei_contig7440.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7440 1913..2374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7440.1.1 ID=prot_P-wetherbeei_contig7440.1.1|Name=mRNA_P-wetherbeei_contig7440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
MLVPNIKVGAVIGKGGSIVKQIREASGAKVTISDSCTALHDDVLEDRTIT
CTGPFAAVGAAFGMILSHCGVIGFGDTLGLNGGCGGGGLGGGGSMAGGGG
GGGGSDGLGPDGLPHVCRLLVPNSRAGGLIGRGGATIKAIREHSGARIEI
SSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1