prot_P-wetherbeei_contig7134.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7134.1.1
Unique Nameprot_P-wetherbeei_contig7134.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length150
Homology
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: D7G3C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C6_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 5.510e-35
Identity = 77/166 (46.39%), Postives = 106/166 (63.86%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDE--------------GHVAAALRVRFL--SFCFEEKRRAYTDAPAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            Y +AV+ VDPK A GKL +LW+DFAKFY   G+   AR IL+KATLV Y+NV++L  V+  WA++E++                  AAA++ R L  S   +EKRRA  + P QERV RS R+W+ YL LE   GT  T +AA+++A+E KVA+ Q VL++A +LE
Sbjct:  321 YTEAVKTVDPKKATGKLHKLWMDFAKFYEGHGDVANARVILEKATLVAYRNVDDLASVWCAWAEMELNHEEFDKALEAVQRAVAEPAAAVQRRRLQASQSRDEKRRAMAEVPVQERVFRSTRVWNLYLDLEESLGTVQTAKAAYERALELKVASAQMVLNFASFLE 486          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: A0A836CA78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA78_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.470e-30
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFE---------EKRR------------AYTDAPAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            YA AV+A+ PK AVGKL  LW++FAKFY E G+   AR + +KA L  Y+NV++L  V+  +A  E+       AL+V   +   +         E+RR            A  ++P Q+RV++S ++W  YL LE   GTP T RAA+D+AME +VATP  VL+YA +LE
Sbjct:  331 YADAVKAISPKLAVGKLCNLWIEFAKFYEEHGDMSNARTVFEKALLPTYRNVDDLASVWCAYADFELRHDCFTEALKVMQRATTGKRGWPPEAAVERRRLTGGHTAASAQKAMAESPVQDRVYKSTKVWSTYLDLEESLGTPETTRAAYDRAMELRVATPGMVLNYATFLE 501          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: A0A443SV32_9ACAR (Pre-mRNA splicing factor Syf1-like protein n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SV32_9ACAR)

HSP 1 Score: 121 bits (303), Expect = 4.980e-29
Identity = 59/152 (38.82%), Postives = 99/152 (65.13%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFEEKRRAYTDA--PAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            +  AVQ VD K A+GK+S LW++FAKFY E  + E AR I +KAT  P+  VE+L +++ EWA++E+ +G+   +LR+   +     K+ +Y D   P Q R+++++++W  Y  LE   GT  T +A +D+ +E ++ATPQ ++++A +LE
Sbjct:  376 FTDAVQTVDAKLAIGKVSTLWVNFAKFYEENDQVEDARIIFEKATDAPFTKVEDLANIWCEWAEMELRKGNHKESLRIMQKATAVPSKKASYFDQNEPVQNRIYKNLKIWSLYADLEESFGTFKTTKAVYDRIIELRIATPQIIINFALFLE 527          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: K8YQA2_NANGC (Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQA2_NANGC)

HSP 1 Score: 120 bits (302), Expect = 6.900e-29
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFEE-----KRRAYTDA----------------------PAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            + +AV+ VDPK A GKL  LW  FAK+Y E  + + AR +L+KATLV +K VEEL  VY  WA++EI   +   AL+V  +     E     +RR  T+A                      P QERVH+S R+W  +L LE   GT AT +AA+++ +E KVATPQ +L++A +LE
Sbjct:  397 FTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQV--MQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLE 571          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: A0A507C5A7_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C5A7_9FUNG)

HSP 1 Score: 118 bits (296), Expect = 4.420e-28
Identity = 69/171 (40.35%), Postives = 101/171 (59.06%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQ----GEGE--------MARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFEEKRRA-------YTD--APAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            Y  A  A+ PK A GKLS+LW+DFA +YA      G+G+         AR I  K+T VPYK VEEL DV++ W+  E++ GH  AAL V   +     K  A       Y+D   P Q+R+ +S++LW+ ++ LE   GT  + RA +D+ +E K+ATPQ++++YA +LE
Sbjct:  452 YTNAFDAISPKKASGKLSQLWIDFALWYARHTTVDGDGDEALVEDADAARAIFTKSTKVPYKRVEELADVWVAWSDWELETGHPEAALEVLGRATSPPAKTSASHQASIRYSDDNLPPQQRLFKSLKLWEHFVDLEEALGTQESTRAVYDRMIELKIATPQTIINYAVFLE 622          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: A0A197KJQ7_9FUNG (Pre-mRNA-splicing factor syf1 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KJQ7_9FUNG)

HSP 1 Score: 115 bits (287), Expect = 7.040e-27
Identity = 64/153 (41.83%), Postives = 96/153 (62.75%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRF-LSFCFEEKRRAYTDA--PAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            Y QAV  + PK A GK + LW++FAKFY +  +   AR I +KAT V YK V +L DV+ E+A++E+   +  AAL+V    +   ++K  A+ D   P Q RV++S+RLW  Y+ LE   GT  + +A +DK +E K+A PQ +++YA +LE
Sbjct:  378 YTQAVTTIHPKKADGKFNGLWINFAKFYEDGNDLISARTIFEKATKVNYKTVNDLADVWCEYAEMEVRHENYDAALQVMARATIPSKQKNIAFHDETLPVQVRVYKSLRLWSFYVDLEESVGTVESTKAVYDKILEIKIANPQIIVNYANFLE 530          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: A0A4P9XWD3_9FUNG (Pre-mRNA-splicing factor SYF1 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XWD3_9FUNG)

HSP 1 Score: 114 bits (284), Expect = 1.780e-26
Identity = 60/153 (39.22%), Postives = 93/153 (60.78%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFEEKRRA-YTD--APAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            Y +A+  V PK A GKL +LW DFA+FY E  + + AR + +KAT V Y+ V +L D++ EWA++E+  G+ A A+ V   +          Y D   P Q R+ +S+RLW  Y+ LE   GT  + RA +D+ ++ ++ATPQ +++YA +LE
Sbjct:  394 YTKALATVQPKKAYGKLHQLWCDFAQFYEEADDLDNARRVFEKATRVDYRAVNDLADIWCEWAEMELRHGNYADAVEVMARATVPPANPNVHYKDETVPVQRRIFKSLRLWSFYVDLEESIGTIESARAVYDRILQLRIATPQIIVNYAAFLE 546          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: UPI00193942E2 (pre-mRNA-splicing factor SYF1-like n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193942E2)

HSP 1 Score: 113 bits (283), Expect = 2.440e-26
Identity = 57/152 (37.50%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFEEKRRAYTD--APAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            Y +A+Q ++   +VGK+S LW+ FAKFY +  + + AR I  KA LV YK VE+L  V+ EWA++E+   +   A+ +   +     KR  Y D   P Q RV++S++LW  Y  LE   GT  T +A +D+ ++ +++TPQ +++Y  +LE
Sbjct:  370 YTEAIQTIEIPKSVGKISNLWVSFAKFYEKHDQIDDARTIFGKAVLVSYKGVEDLATVWCEWAEMELRHENFDGAINLMKRATAMPPKRAGYFDHTEPVQNRVYKSLKLWSMYADLEESFGTFHTCKAVYDRILDLRISTPQIIINYGMFLE 521          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: A0A7S2W251_9STRA (Glycine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W251_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.370e-26
Identity = 70/179 (39.11%), Postives = 97/179 (54.19%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEID---------------EGHVAA--------------ALRVRFLSFCFEEKRRAYTDAPAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            Y +AV+ V P  A GK   LWL FAKFY + G+   AR IL KA  V YK V++L +V+  W ++E+                EG+ AA               +R R L     + R + T+ P QER+H+SVR+W  YL LE   GT  T RAA+D+ +E ++ATPQ +L+YA +LE
Sbjct:  380 YTEAVKTVVPSQATGKPHTLWLAFAKFYEDHGDVASARTILQKAVEVAYKTVDDLAEVWCGWGEMELRVAEACSAEDDADGAAEGYQAALEVMQRATAEPPASVIRQRALE---AQGRGSKTEIPVQERLHKSVRVWTFYLDLEESLGTVDTTRAAYDRVLELRIATPQVILNYAAFLE 555          
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Match: A0A8J5CTX2_CHIOP (Pre-mRNA-splicing factor SYF1 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J5CTX2_CHIOP)

HSP 1 Score: 112 bits (281), Expect = 4.380e-26
Identity = 59/152 (38.82%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    1 YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYKNVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFEEKRRAYTDA--PAQERVHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE 150
            Y +AV+ +DPK A GKL  LW+DFAKFY + G+   AR I  +AT V Y  V +L  V+ EWA++EI   +   AL++   +      + AY D   P Q RV++S++LW  Y  LE   GT  + +A +D+ ++ ++ATPQ +++Y  +L+
Sbjct:  393 YMEAVKTIDPKMATGKLYSLWVDFAKFYEDNGQIVDARIIFQRATEVSYVKVHDLASVWCEWAEIEIRHNNEEEALKLMKRATAPPPHKVAYNDESEPVQRRVYKSLKLWSMYADLEESLGTFRSCKAVYDRIIDLRIATPQIIINYGMFLQ 544          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7134.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C6_ECTSI5.510e-3546.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CA78_9STRA2.470e-3041.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A443SV32_9ACAR4.980e-2938.82Pre-mRNA splicing factor Syf1-like protein n=1 Tax... [more]
K8YQA2_NANGC6.900e-2941.24Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidac... [more]
A0A507C5A7_9FUNG4.420e-2840.35Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A197KJQ7_9FUNG7.040e-2741.83Pre-mRNA-splicing factor syf1 n=1 Tax=Linnemannia ... [more]
A0A4P9XWD3_9FUNG1.780e-2639.22Pre-mRNA-splicing factor SYF1 n=1 Tax=Thamnocephal... [more]
UPI00193942E22.440e-2637.50pre-mRNA-splicing factor SYF1-like n=2 Tax=Styela ... [more]
A0A7S2W251_9STRA3.370e-2639.11Glycine--tRNA ligase n=1 Tax=Rhizochromulina marin... [more]
A0A8J5CTX2_CHIOP4.380e-2638.82Pre-mRNA-splicing factor SYF1 n=1 Tax=Chionoecetes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..148
e-value: 2.3E-9
score: 38.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 14..130
IPR045075Pre-mRNA-splicing factor Syf1-likePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..150
NoneNo IPR availablePANTHERPTHR11246:SF5PRE-MRNA-SPLICING FACTOR SYF1coord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7134contigP-wetherbeei_contig7134:595..1938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7134.1.1mRNA_P-wetherbeei_contig7134.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7134 595..1938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7134.1.1 ID=prot_P-wetherbeei_contig7134.1.1|Name=mRNA_P-wetherbeei_contig7134.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
YAQAVQAVDPKAAVGKLSRLWLDFAKFYAEQGEGEMARGILDKATLVPYK
NVEELVDVYLEWAQLEIDEGHVAAALRVRFLSFCFEEKRRAYTDAPAQER
VHRSVRLWDRYLALEAEAGTPATVRAAHDKAMETKVATPQSVLDYAEYLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR045075Syf1-like