prot_P-wetherbeei_contig7108.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7108.3.1
Unique Nameprot_P-wetherbeei_contig7108.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length193
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7108.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 12..115
e-value: 2.0E-10
score: 40.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..163
e-value: 3.2E-28
score: 101.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 70..101
e-value: 7.1E-4
score: 17.6
coord: 34..68
e-value: 1.5E-5
score: 22.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..31
score: 8.516988
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 67..101
score: 10.084454
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 32..66
score: 10.829822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..159
NoneNo IPR availablePANTHERPTHR47934PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIALcoord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7108contigP-wetherbeei_contig7108:2106..2684 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7108.3.1mRNA_P-wetherbeei_contig7108.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7108 2104..2684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7108.3.1 ID=prot_P-wetherbeei_contig7108.3.1|Name=mRNA_P-wetherbeei_contig7108.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp
YTLVVAGLATARDAAGAVALLDQMEAGGLRPNLHTYSAAMGACQQAGDAA
AALALLARMRRRGVTPDAFCYTPCVGACVAAGQRAQALSLLDDMRRHGVR
PLVRTYQAMLEACQDDDGDHSDDSASADESQETGVGISSGGGSGRKGGGG
GGWIDGAGGTEAQDAAAAAVATAAELVDSDDAGTAAAAAPGTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat