prot_P-wetherbeei_contig6919.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6919.1.1
Unique Nameprot_P-wetherbeei_contig6919.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length234
Homology
BLAST of mRNA_P-wetherbeei_contig6919.1.1 vs. uniprot
Match: A0A6H5JXB1_9PHAE (Ku domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXB1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 7.000e-21
Identity = 73/233 (31.33%), Postives = 113/233 (48.50%), Query Frame = 0
Query:   17 MVPHLAEAKRVITTEMQFLLTQSKTHEVGVVLYGVPDEETDIPLFTREAEDLNE--DGSYNGVREFIQIDRTSIAMMRELEGVR---ANPGVRSDPFSALIVAMDQIYKRTKRKKYDRHVYLLTDARSMAVVAAXXXXXXXXXXXXXXXXXXXXXXXDN---------EVQSDNVRMYASLVRHVGGSVESAQQALRSV-DARPRSKKPLATVVPLRVGTSLRVQCRMFKKTD 234
            M  H+  A+R +   M   + QSK HEVGVVL+G+P+ ET        A  LNE  +  Y GV+E+  +D+ S+A++R++E +    +      D   A++V M  I  RT +KKY RHVYLLTDA +     +                        +          V+  N +M AS+     G+V  AQ  +  + ++  ++  P+ + V L +GT+L + CR FKKTD
Sbjct:    1 MGDHMELARRAVRVLMVQKMLQSKQHEVGVVLFGLPEAET--------ANQLNEAENSDYLGVKEYCLLDKGSVAVLRKVEAMDIPDSGEPAMGDLLDAMVVGMHMIRSRTLKKKYMRHVYLLTDAATPVAEVSQLGDIVGMYTDPTMECRLHFMGFGHGAPAEEGGGTVKEQNEKMLASVAAATRGTVVPAQTVVDLMGESTIKTTNPVLSKVDLSLGTNLTLHCRFFKKTD 225          
BLAST of mRNA_P-wetherbeei_contig6919.1.1 vs. uniprot
Match: A0A7S2GJ59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJ59_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.980e-11
Identity = 45/119 (37.82%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   20 HLAEAKRVITTEMQFLLTQSKTHEVGVVLYGVPDEETDIPLFTREAEDLNEDGSYNGVREFIQIDRTSIAMMRELEGVRANPGVRS-DPFSALIVAMDQIYKRTKRKKYDRHVYLLTDA 137
             L EA   +   ++  + QSKT+EVG++L+G   E+TD PL    AED+  DG+Y  V     ++R ++++  +LE     PG+ S D    L+VA+D +++RT +KKY R +YL+T A
Sbjct:   12 RLEEALEGVRMMIESKILQSKTNEVGIILFGT--EDTDNPL----AEDMG-DGNYENVTVLAPLERPAVSLTAQLEE-DVKPGIVSADLIDGLVVAVDMMHRRTDKKKYIRSIYLITAA 122          
BLAST of mRNA_P-wetherbeei_contig6919.1.1 vs. uniprot
Match: F1A270_DICPU (VWFA domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A270_DICPU)

HSP 1 Score: 62.4 bits (150), Expect = 1.300e-7
Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 0
Query:    1 MDGKKGVIFVLDVGDSMVPHLA-----------EAKRVITTEMQFLLTQSKTHEVGVVLYGVPDEETDIPLFTREAEDLNEDGSYNGVREFIQIDRTSIAMMRELEGVRANPGV-RSDPFSALIVAMDQIYKRTKRKKYDRHVYLLTDAR 138
            +  K+ V+ VLDVG  M   L+           +A R +T   Q  L  SK  E+G+VL G           T+  ++  +D  Y  +     I+  SI  ++ LE +   PG  + D   +LIVAMD + KRT+ KKY + ++L+T+A+
Sbjct:    4 ISSKEAVVIVLDVGIGMTSVLSNNNNNETSPIEDALRSVTLLYQQKLIYSKKDELGLVLIG-----------TKGTKNNLQDDGYQHITVASDIEEPSIETLKYLENL--GPGESKGDVIDSLIVAMDMLIKRTENKKYQKRIFLVTNAK 140          
BLAST of mRNA_P-wetherbeei_contig6919.1.1 vs. uniprot
Match: UPI000644DEE0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DEE0)

HSP 1 Score: 58.9 bits (141), Expect = 1.900e-6
Identity = 46/147 (31.29%), Postives = 71/147 (48.30%), Query Frame = 0
Query:    4 KKGVIFVLDVGDSMVPHLAEAKRVITTE------------MQFLLTQSKTHEVGVVLYGVPDEETDIPLFTREAEDLNEDGSYNGVREFIQIDRTSIAMMRELEGVRANPGV-RSDPFSALIVAMDQIYKRTKRKKYDRHVYLLTDA 137
            K+ ++ +LD+G  M  H  EAK   TT              Q  L   K  E+GVVL G    + +          L +DG Y  +    +I+   I  ++ LE +  +PG  R D   ALIVAMD +  +T++KKY + ++L+T+A
Sbjct:    9 KEALVIILDIGLGMHHHTNEAKHASTTTPIEEALKSVTLLFQQKLIYGKKDELGVVLVGTKGTKNN----------LQKDG-YQHITMQSEIEEPKIETLKYLENL--SPGESRGDLIDALIVAMDMLINKTEKKKYQKRIFLVTNA 142          
BLAST of mRNA_P-wetherbeei_contig6919.1.1 vs. uniprot
Match: XRCC5_DICDI (X-ray repair cross-complementing protein 5 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=XRCC5_DICDI)

HSP 1 Score: 57.0 bits (136), Expect = 8.500e-6
Identity = 34/135 (25.19%), Postives = 68/135 (50.37%), Query Frame = 0
Query:    4 KKGVIFVLDVGDSMVPHLAEAKRVITTEMQFLLTQSKTHEVGVVLYGVPDEETDIPLFTREAEDLNEDGSYNGVREFIQIDRTSIAMMRELEGVRANPGVRSDPFSALIVAMDQIYKRTKRKKYDRHVYLLTDAR 138
            K+ V+ +LD+G  M    ++     T+ ++  L          ++YG  D+   + + T+  ++  +D  Y  +     I+  SI  ++ LE +      + D   +LIVAMD + ++T+ KKY + ++L+T+AR
Sbjct:    8 KEAVVVILDIGLGMTSKDSDGTTTTTSSIEDALRSVTLLYQQKLIYGKKDQLGLVLIGTKGTKNNLQDDGYQHITVVSDIEEPSIETLKYLENLAPGES-KGDVIDSLIVAMDMLIRKTENKKYQKRIFLVTNAR 141          
BLAST of mRNA_P-wetherbeei_contig6919.1.1 vs. uniprot
Match: L2GB67_COLFN (ATP-dependent DNA helicase II subunit 2 n=6 Tax=Colletotrichum gloeosporioides species complex TaxID=2707338 RepID=L2GB67_COLFN)

HSP 1 Score: 53.9 bits (128), Expect = 8.920e-5
Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0
Query:    1 MDGKKGVIFVLDVGDSMVP-HLAEAKRVITTEMQFL--------LTQSKTHEVGVVLYGVPDEETDIPLFTREAEDLNEDGSYNGVREFIQIDRTSIAMMREL-EGVRANPGVRSDPFSALIVAMDQIYKRTKRKKYDRHVYLLTD 136
            M  K+  ++++DVG+SM   H    +  +   M+++            KT  VGVV     D        TR A  + +D  Y  +    ++   ++  MREL E ++ +     D  SA+++A+D I   TK+ KY R VYL+TD
Sbjct:    1 MADKEASVYIIDVGNSMADCHNGRTESDLDWSMRYVWDKISTTVAASRKTWTVGVVGLKTDD--------TRNA--MQDDEGYESISVLQELGPMTLTSMRELKEEIKPSGTETGDAVSAVVIAVDMIQTFTKKLKYKRRVYLITD 136          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6919.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JXB1_9PHAE7.000e-2131.33Ku domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2GJ59_9STRA1.980e-1137.82Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F1A270_DICPU1.300e-731.33VWFA domain-containing protein n=1 Tax=Dictyosteli... [more]
UPI000644DEE01.900e-631.29hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
XRCC5_DICDI8.500e-625.19X-ray repair cross-complementing protein 5 n=1 Tax... [more]
L2GB67_COLFN8.920e-528.77ATP-dependent DNA helicase II subunit 2 n=6 Tax=Co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 2..203
e-value: 5.4E-27
score: 96.5
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 3..139
IPR005161Ku70/Ku80, N-terminal alpha/betaPFAMPF03731Ku_Ncoord: 7..146
e-value: 7.6E-8
score: 32.4
NoneNo IPR availablePANTHERPTHR12604:SF4X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 5coord: 3..233
NoneNo IPR availablePANTHERPTHR12604KU AUTOANTIGEN DNA HELICASEcoord: 3..233
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 6..182
score: 8.738361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6919contigP-wetherbeei_contig6919:535..1883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6919.1.1mRNA_P-wetherbeei_contig6919.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6919 535..1915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6919.1.1 ID=prot_P-wetherbeei_contig6919.1.1|Name=mRNA_P-wetherbeei_contig6919.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp
MDGKKGVIFVLDVGDSMVPHLAEAKRVITTEMQFLLTQSKTHEVGVVLYG
VPDEETDIPLFTREAEDLNEDGSYNGVREFIQIDRTSIAMMRELEGVRAN
PGVRSDPFSALIVAMDQIYKRTKRKKYDRHVYLLTDARSMAVVAAAAADV
DAANAAEAVVAAAAAGGDDNEVQSDNVRMYASLVRHVGGSVESAQQALRS
VDARPRSKKPLATVVPLRVGTSLRVQCRMFKKTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR005161Ku_N
IPR002035VWF_A