prot_P-wetherbeei_contig6621.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6621.1.1
Unique Nameprot_P-wetherbeei_contig6621.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length403
Homology
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: D8LQR0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR0_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.190e-13
Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 0
Query:  205 AAVPTCRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDLL 255
            +A+  C +CL+A+R G+R+CRLPCAH +HA CI  WLD++H+CP CRLDLL
Sbjct:  174 SALTDCSVCLEAYRNGDRVCRLPCAHAFHASCINTWLDQQHVCPQCRLDLL 224          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: A0A6H5K2C2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C2_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.750e-13
Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 0
Query:  205 AAVPTCRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDLL 255
            +A+  C +CL+A+R G+R+CRLPCAH +HA CI  WLD++H+CP CRLDLL
Sbjct:  309 SALTDCSVCLEAYRNGDRVCRLPCAHAFHASCINTWLDQQHVCPQCRLDLL 359          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: UPI00148A12AD (uncharacterized RING finger protein ECU07_0330 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A12AD)

HSP 1 Score: 72.8 bits (177), Expect = 2.070e-10
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  208 PTCRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDL 254
            P CR+CL +F++G++LC LPC HDYHA C++ WL R   CP+CR D+
Sbjct:  330 PGCRVCLSSFKSGDKLCTLPCKHDYHAACVKEWLKRNASCPICRHDM 376          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: A0A8B8CZT7_CRAVI (uncharacterized RING finger protein ECU07_0330-like n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CZT7_CRAVI)

HSP 1 Score: 72.8 bits (177), Expect = 2.160e-10
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  208 PTCRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDL 254
            P CR+CL +F++G++LC LPC HDYHA C++ WL R   CP+CR D+
Sbjct:  338 PGCRVCLSSFKSGDKLCTLPCKHDYHAACVKEWLKRNASCPICRHDM 384          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: UPI001CF99746 (uncharacterized RING finger protein C2A9.04c-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF99746)

HSP 1 Score: 70.5 bits (171), Expect = 2.940e-10
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0
Query:  210 CRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDL 254
            C ICL+ F  G+ LCRLPC+H YH DCI  WL++ H CPLCR  L
Sbjct:  183 CSICLEEFNVGDELCRLPCSHFYHEDCIVPWLEKSHTCPLCRFPL 227          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: A0A821ZK95_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821ZK95_9NEOB)

HSP 1 Score: 71.6 bits (174), Expect = 7.670e-10
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0
Query:  202 TTPAAVPTCRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDLLA 256
            +T ++VP C ICLD F  G+ L  LPC+H+YH +C+ +WL   H CPLC  D+LA
Sbjct:   96 STSSSVPVCAICLDEFSDGQDLRILPCSHEYHLNCVDIWLKDNHTCPLCMFDILA 150          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: A0A6V7Q3M8_ANACO (RING-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q3M8_ANACO)

HSP 1 Score: 65.5 bits (158), Expect = 2.010e-9
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 0
Query:  210 CRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCR 251
            C IC+D F  G RLC++PC+H +H +C+  WL+R  LCPLCR
Sbjct:   82 CSICMDEFEEGARLCKIPCSHAFHEECLTRWLERSRLCPLCR 123          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: A0A7S3YH52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH52_HETAK)

HSP 1 Score: 62.8 bits (151), Expect = 1.660e-8
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 0
Query:  210 CRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDLLAYA 258
            C ICL+ F  GE++C+LPC H++H  C+ +WL     CP CR+D+ A A
Sbjct:   72 CPICLNEFSAGEKVCQLPCLHEFHKQCVGMWLKVNATCPYCRVDMAAAA 120          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: A0A6P5G894_ANACO (uncharacterized protein LOC109721570 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5G894_ANACO)

HSP 1 Score: 65.9 bits (159), Expect = 1.870e-8
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:  210 CRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDL 254
            C IC+D F  G RLC++PC+H +H +C+  WL+R  LCPLCR  +
Sbjct:  230 CSICMDEFEEGARLCKIPCSHAFHEECLTRWLERSRLCPLCRYSI 274          
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Match: A0A4S8JUT3_MUSBA (RING-type domain-containing protein n=2 Tax=Musa TaxID=4640 RepID=A0A4S8JUT3_MUSBA)

HSP 1 Score: 64.7 bits (156), Expect = 2.140e-8
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:  210 CRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLCRLDLLAYAG 259
            C +CL+    GE++CR+PC+H +HA C+R WL    LCPLCR  L A  G
Sbjct:  164 CSVCLENMGRGEKVCRMPCSHVFHATCLRQWLQLSRLCPLCRFSLTADDG 213          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6621.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQR0_ECTSI1.190e-1360.78RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2C2_9PHAE3.750e-1360.78RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI00148A12AD2.070e-1055.32uncharacterized RING finger protein ECU07_0330 n=1... [more]
A0A8B8CZT7_CRAVI2.160e-1055.32uncharacterized RING finger protein ECU07_0330-lik... [more]
UPI001CF997462.940e-1060.00uncharacterized RING finger protein C2A9.04c-like ... [more]
A0A821ZK95_9NEOB7.670e-1050.91(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
A0A6V7Q3M8_ANACO2.010e-954.76RING-type domain-containing protein n=1 Tax=Ananas... [more]
A0A7S3YH52_HETAK1.660e-846.94Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6P5G894_ANACO1.870e-851.11uncharacterized protein LOC109721570 n=2 Tax=Anana... [more]
A0A4S8JUT3_MUSBA2.140e-850.00RING-type domain-containing protein n=2 Tax=Musa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 210..250
e-value: 4.5E-6
score: 36.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 209..251
e-value: 2.2E-10
score: 40.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 210..251
score: 12.031935
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 179..255
e-value: 1.1E-16
score: 62.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..384
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 192..253
NoneNo IPR availablePANTHERPTHR15710:SF120F6A14.12 PROTEIN-RELATEDcoord: 192..253
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 209..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6621contigP-wetherbeei_contig6621:128..1336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6621.1.1mRNA_P-wetherbeei_contig6621.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6621 12..2055 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6621.1.1 ID=prot_P-wetherbeei_contig6621.1.1|Name=mRNA_P-wetherbeei_contig6621.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=403bp
MGANARGDAPSGRSAGAGSDGTSLGGAAFGGHGGGEQDRLEMLFAEITAL
DFELLLHSGEKAVPRAVQDSYEYYCYDGGGGAGESSGGSCNDSGGGRNDG
SCGGGGGGGESNSAEGGCRDGAAVRGAAVPHGRPAAVSALEAVATCTPAA
ACDPLTAAAATAAAPSAEAAGTGAATADSATWAAAVTGAAAASAVAIATP
ATTPAAVPTCRICLDAFRTGERLCRLPCAHDYHADCIRVWLDRRHLCPLC
RLDLLAYAGMDADDSLAATAAAAAVVAPPLPLPSPPPPLLPRRPVAAVPP
WRPRARSLDAGVSSRNRFGGGIDGGGGGGGVGGDDGGDNVGGGNGVAAAA
GNAGFENDGSSGGDGSVGNLGEPPRGPPAGAARVGVSVRPTPFAGWFQVP
RY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD