prot_P-wetherbeei_contig6616.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6616.1.1
Unique Nameprot_P-wetherbeei_contig6616.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length413
Homology
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BLAST of mRNA_P-wetherbeei_contig6616.1.1 vs. uniprot
Match: A0A7S0AE60_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AE60_9DINO)

HSP 1 Score: 57.0 bits (136), Expect = 3.510e-5
Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = 0 
Query:  227 VAVHVRLGDI----LVKLAAWD---RLHLDIGCWQIPSLEAVRAVVRPTCIQMTLITDGNATHPDVAGIFRRFPDLDIRL----MGDDVPARPAYEEMLAADVLVAGKSGFSSSAA 331
            V +HVRLGDI      +  A++   +L++D     I +L+A+  V+ P C++++L+TDG  T PD+  + +   +  I        + + A  A+E M  ADVLV G SGF   AA
Sbjct:  261 VVMHVRLGDIENNCSARFTAYNCNKKLNVD---QYILTLQALVEVLPPHCMELSLVTDGQLTSPDIVYVLKNLTNSGIPKPQVWTANQLDAEGAFEFMTHADVLVYGPSGFGQLAA 373
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6616.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0AE60_9DINO3.510e-534.48Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6616contigP-wetherbeei_contig6616:901..2139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6616.1.1mRNA_P-wetherbeei_contig6616.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6616 253..2544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6616.1.1 ID=prot_P-wetherbeei_contig6616.1.1|Name=mRNA_P-wetherbeei_contig6616.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=413bp
MDMPARWKPSPAGRRQQRRPPGRGPDDGGRRVLGVRGTAEVEIDAAAAVA
PAAAVAPAAAAPAAAMAAAAATAEAGGAMHGRALAATFDWSQCKSGVVLV
PPDVLVWKKSGLDTTVAGQLLKDRFYAARILAGKAMPPATSASSVPPQKQ
LPAPPTPWTAVPETLSSSDLPVPQLLPAALPVPTSPEITVLGGVPAVGAM
TVVSEPSAGPLPPLPLSPPPEPPVVSVAVHVRLGDILVKLAAWDRLHLDI
GCWQIPSLEAVRAVVRPTCIQMTLITDGNATHPDVAGIFRRFPDLDIRLM
GDDVPARPAYEEMLAADVLVAGKSGFSSSAAAFRRAGIAVVPAGAEFPLQ
TSETVFAIPHGVCNGGGGGIAGKDMATAPLSAGWGDDTRNSAIRAIATAL
ENHPAMPACRIP*
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