prot_P-wetherbeei_contig6402.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6402.1.1
Unique Nameprot_P-wetherbeei_contig6402.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length479
Homology
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BLAST of mRNA_P-wetherbeei_contig6402.1.1 vs. uniprot
Match: D7G8U9_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U9_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 4.550e-13
Identity = 40/76 (52.63%), Postives = 60/76 (78.95%), Query Frame = 0 
Query:    1 LTRAARILAEEQRSAKAVRSFLLNFLEERDGSIKRRINLKRHELETGRAATDATVQEICRVQPAIIGLVLRDCAAV 76
            L+++A++L E+++   ++RSFLLNFLE RD SIK+R++L  H+ ETGR  TDA VQE+C+++P +IGL LR+C  V
Sbjct:  142 LSKSAKLLEEDRKKVASIRSFLLNFLEGRDCSIKKRLDLYVHQTETGRPVTDAVVQEVCKLRPEMIGLSLRNCIEV 217
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BLAST of mRNA_P-wetherbeei_contig6402.1.1 vs. uniprot
Match: A0A836CGM1_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGM1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.880e-11
Identity = 40/73 (54.79%), Postives = 57/73 (78.08%), Query Frame = 0 
Query:    4 AARILAEEQRSAKAVRSFLLNFLEERDGSIKRRINLKRHELETGRAATDATVQEICRVQPAIIGLVLRDCAAV 76
            A++  + +QR+ + VRSF+LNFLE+RDGSIK+R++L  H++E+GRA TDA VQE+ R  P + GL LR CAA+
Sbjct:   83 ASKAESADQRN-RTVRSFMLNFLEDRDGSIKKRLDLGLHQVESGRAVTDAVVQEVARACPQLRGLALRGCAAL 154
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BLAST of mRNA_P-wetherbeei_contig6402.1.1 vs. uniprot
Match: A0A7S1XL41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XL41_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.350e-7
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:   10 EEQRSAKAVRSFLLNFLEERDGSIKRRINLKRHELETGRAATDATVQEICRVQPAIIGLVLRDCAAV 76
            +  R+ K +RSFLLNFL E DGS++  I+L  H  ETG+  T+A VQEIC+++P +  L LRDC  V
Sbjct:  145 DSPRARKTLRSFLLNFLTEEDGSVRDDIDLDLHSRETGQPITNAIVQEICKMKPDMKKLNLRDCQLV 211
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6402.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8U9_ECTSI4.550e-1352.63Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A836CGM1_9STRA3.880e-1154.79WW domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S1XL41_9STRA2.350e-750.75Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 393..413
NoneNo IPR availableGENE3D1.20.5.190coord: 435..479
e-value: 5.3E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 48..118
coord: 246..321
coord: 333..371
coord: 166..236
coord: 114..180
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 56..317
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 349..374
e-value: 560.0
score: 0.9
coord: 140..165
e-value: 0.37
score: 19.9
coord: 114..139
e-value: 11.0
score: 14.2
coord: 166..194
e-value: 0.035
score: 23.2
coord: 88..113
e-value: 0.078
score: 22.1
coord: 195..220
e-value: 4.1E-4
score: 29.7
coord: 273..298
e-value: 3.5E-4
score: 29.9
coord: 62..87
e-value: 110.0
score: 6.3
coord: 247..272
e-value: 6.5E-4
score: 29.0
coord: 221..246
e-value: 37.0
score: 10.1
coord: 299..324
e-value: 0.16
score: 21.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 33..183
e-value: 3.2E-28
score: 100.3
coord: 184..382
e-value: 1.3E-42
score: 147.8
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 302..321
e-value: 0.036
score: 14.2
coord: 167..184
e-value: 1.2
score: 9.4
coord: 273..296
e-value: 0.013
score: 15.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 464..479
score: 7.492001
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 435..464
score: 9.6697

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6402contigP-wetherbeei_contig6402:2019..3455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6402.1.1mRNA_P-wetherbeei_contig6402.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6402 2019..3457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6402.1.1 ID=prot_P-wetherbeei_contig6402.1.1|Name=mRNA_P-wetherbeei_contig6402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=479bp
LTRAARILAEEQRSAKAVRSFLLNFLEERDGSIKRRINLKRHELETGRAA
TDATVQEICRVQPAIIGLVLRDCAAVTDVGLWCIARHAPGIRELDLGGCG
GISHVGLRSLALRCSSLEHLDFSRCPALCDRSLRVLSGACWRLRILILRG
CAGVSDTGVAELARQSPELRHLDVSGCPRIGDYGDRALMQLGSTCPDLRR
LDAIGCRHVSDAGVSAVAAGCRRLEALLLTGCGDVTGAGACALGAHCPLL
RELGLAGCRRVGDADVRRLVDGCPRLRVLDLSGCDRLTAAGLAHLAAGLR
ELQELNVSGCAGVDDEGLAALVGVRAWRVGAARCVRVTESGIARLAEDCP
TLSSLDVTGCPLIRRRFLAQLCLQMRFAELADGYFGFQAKPDAAELRRHA
AEEERQAAAADRIQGAVRQRLARTRLWLARREWILKNRLVRMQAVARGFL
ARRRYVALRRRERARRAAIRLQALWRGTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR000048IQ_motif_EF-hand-BS