prot_P-wetherbeei_contig5975.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5975.3.1
Unique Nameprot_P-wetherbeei_contig5975.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length281
Homology
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: A0A836CLD5_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD5_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.860e-71
Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 0
Query:    1 MADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQSKWEEARRAKQTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVELEQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRIDD 171
            + DFK+RKQI + R +GQ+ PE D  TG+MINPHNP+FI+KRPWYLGDSGPSL HHSKQ++ + LSMK+AD ++Q+KW  A++A   A  FR GAC NCGAMGHKT ECVERPRS K+AAWKTG+  A DD  V LE YG + FDAKRDRW GYHPDQHKEVVERF ++D+
Sbjct:    3 VTDFKKRKQIEQARMSGQLAPETDTETGKMINPHNPDFISKRPWYLGDSGPSLKHHSKQKSDHVLSMKEADMIVQTKW--AKKA-DAAVKFRPGACKNCGAMGHKTTECVERPRSTKRAAWKTGVATATDDTVVSLEAYGKLNFDAKRDRWHGYHPDQHKEVVERFNKLDE 170          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: D7FU41_ECTSI (Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU41_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.170e-70
Identity = 112/170 (65.88%), Postives = 134/170 (78.82%), Query Frame = 0
Query:    1 MADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQSKWEEARRAKQTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVELEQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRID 170
            MA  KQ +Q+ + R+AGQIEPE D  TG+MINPHNPEFITKRPWYLG+SGPSL HHSKQ+    L+MK AD L+Q +W   ++A   ATG+RKGAC NCGAMGHK +ECVERPRS KKAA KTG+DIA DD++ +L  +G V FDAKRDRW GYHPD+HK  +ERF +ID
Sbjct:    1 MASRKQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDAVLTMKKADELVQQRWATKKKA---ATGYRKGACKNCGAMGHKASECVERPRSGKKAAMKTGMDIAADDVQTDLTSHGKVSFDAKRDRWLGYHPDEHKHTIERFNKID 167          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: A0A7S1UCF0_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCF0_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.440e-51
Identity = 89/172 (51.74%), Postives = 129/172 (75.00%), Query Frame = 0
Query:    1 MADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQSKWEEARRAK-QTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVELEQYGNVKFDAKRDRWQGYHPDQHKEVV-ERFQRID 170
            MA+ +Q ++IAE RQAG + PE D   G+M+NPHNPE+ITKRPWYLG+ G  + HH+KQ+  + LS+ +AD L+ +   E++R K Q A G+RKGAC NCG+M HK  +C+ERPRS K +A  +GLDIA DD+ V+LEQ+G + FDAKRD +QG+  D H++++ E+F++++
Sbjct:    8 MAERRQNRKIAEARQAGTLAPETDED-GRMVNPHNPEYITKRPWYLGEGG-GIKHHAKQKQTHLLSLVEADELVNAARVESKRKKRQRAAGYRKGACQNCGSMTHKAKDCLERPRSKKTSARHSGLDIAADDVTVDLEQHGKLAFDAKRDGYQGFDVDHHQKLLREKFEKLE 177          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: A0A7S2V1R9_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1R9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.150e-50
Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 0
Query:   21 PEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQSKWEEARRAKQTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVELEQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRID 170
            PE D  +G+MINPHNPE+ITKRPWYLG SGPSL HHS Q+    LSM +ADAL+  K  + R+  + AT +RKGAC NCGAMGHK  ECVERPRS+K AA  +GLDIAPD   V+L ++G + +DAKRD W GY  +Q K V+ERF  ++
Sbjct:    1 PEIDEESGKMINPHNPEYITKRPWYLGSSGPSLKHHSLQKINRLLSMHEADALI--KEGKTRKGFKAAT-YRKGACTNCGAMGHKARECVERPRSDKLAAKNSGLDIAPDQEVVDLTKFGKLSYDAKRDHWHGYSAEQQKMVIERFNLME 147          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: A0A7S3HC70_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC70_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.110e-47
Identity = 80/154 (51.95%), Postives = 118/154 (76.62%), Query Frame = 0
Query:   20 EPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQSKWEEARRAKQTA--TGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVELEQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRIDD 171
            EP+ D   G+MINPHNP+FITK PWYLG+SGP+L HH+ Q+A + LS+ ++DAL++ K    + + Q A  T +RKGAC NCGAM H   +CVERPRS KK+AWK+GLDIA D++ ++LE +G V +DAKRD+W+GY P +++ ++++ +R+++
Sbjct:    5 EPKLDQD-GKMINPHNPDFITKVPWYLGNSGPTLKHHAVQKADHFLSLTESDALIEQKLAARKASVQAAPKTSYRKGACKNCGAMSHNEKDCVERPRSTKKSAWKSGLDIAADEVTMKLEDHGKVSYDAKRDQWKGYDPVEYQTIIDKHERLEE 157          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: A0A7R9U7Z6_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z6_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.850e-47
Identity = 84/172 (48.84%), Postives = 127/172 (73.84%), Query Frame = 0
Query:    1 MADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQSKWEEARRAK-QTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVELEQYGNVKFDAKRDRWQGYHPDQHKEVVE-RFQRID 170
            MA+  ++++IAE RQAG + PE D   G+M+NPHNPE+ITKRPWYLG+ G  + HH KQ+  + LS+ +A+ L+Q    +A++ K Q A GFRKGAC NCG++ H   +C+ERPR+ K AAWKTGLDIA DD++V+LE +G + +DAKRD ++G+  + H++++  ++ R++
Sbjct:    8 MAERNKKRKIAEARQAGTLAPEVD-DEGRMVNPHNPEYITKRPWYLGEGG-GIKHHQKQKVTHFLSLNEAEELVQDARRQAKQNKRQRALGFRKGACRNCGSLSHTEKDCLERPRAAKSAAWKTGLDIANDDVQVDLETHGKLAYDAKRDSYRGFDVEHHQKLLRMKYDRLE 177          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: A0A484DY55_BRELC (Pre-mRNA-splicing factor SLU7 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY55_BRELC)

HSP 1 Score: 175 bits (443), Expect = 5.110e-47
Identity = 92/176 (52.27%), Postives = 122/176 (69.32%), Query Frame = 0
Query:    3 DFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQSKWEEARRAKQTATG------FRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVEL--EQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRID 170
            DFK++++I E R+ G + PEQD   G +INPHNPEFI+KRPWYLGDSGPSL H + Q  A  LS+ +AD L    + + R+A+   TG      +RKGAC NCGAM HKT ECVERPR  K  AWKT +D+  D++ V++  E++G + FDAKRD+W GY P  H + VER+++ID
Sbjct:   13 DFKKKREIEEARKNGILPPEQDAE-GNLINPHNPEFISKRPWYLGDSGPSLNHQTLQHQARLLSINEADEL----YIKGRKAQSLITGIARKRKWRKGACKNCGAMSHKTNECVERPR--KIGAWKTNMDLKKDEVVVDVRSEKFGKLTFDAKRDQWLGYDPKDHLKTVERYEKID 181          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: W2PIB2_PHYPN (Pre-mRNA-splicing factor SLU7 n=12 Tax=Phytophthora TaxID=4783 RepID=W2PIB2_PHYPN)

HSP 1 Score: 174 bits (441), Expect = 1.000e-46
Identity = 90/173 (52.02%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    2 ADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADALLQS--KWEEARRAKQTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVEL--EQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRID 170
            +DFK++++I E R+ G + PEQD   G +INPHNPE+I+KRPWYLGDSGPSL H + Q  A+ LS+ +AD L     K + A  +      +RKGAC NCGAM HKT ECVERPR  K  AWKT  D+  DDM V++  E++G + FDAKRD+W GY P  H + VER++++D
Sbjct:   12 SDFKKKREIEEARKNGTLPPEQDAD-GNLINPHNPEYISKRPWYLGDSGPSLKHQTLQHQAHLLSIHEADELYLKGRKQQAAASSAGRQRKWRKGACKNCGAMSHKTNECVERPR--KVGAWKTNKDLKSDDMVVDVRSEKFGKLAFDAKRDQWLGYDPKDHSKTVERYEKVD 181          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: K3X5L6_GLOUD (Pre-mRNA-splicing factor SLU7 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5L6_GLOUD)

HSP 1 Score: 174 bits (441), Expect = 1.090e-46
Identity = 91/175 (52.00%), Postives = 125/175 (71.43%), Query Frame = 0
Query:    2 ADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADAL-LQSKWEEARR--AKQTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVEL--EQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRIDD 171
            +DFK+++++ E R+ G + PEQD   G +INPHNPEFITKRPWYLGDSGPSL H S Q  ++ LS+ +AD L L+ K  +A+   A++  T +RKGAC NCGAM HKT ECVERPR  K  AWK+  DI  D++ V++  +Q+G + FDAKRD+W GY P +H + + R+ +ID+
Sbjct:   12 SDFKKKRELEEARKNGTLPPEQDAE-GNLINPHNPEFITKRPWYLGDSGPSLKHQSVQNQSHLLSIHEADELYLRGKKVKAQSSAAERKPTKWRKGACKNCGAMSHKTHECVERPR--KVGAWKSNKDIKGDEVLVDVRSQQFGKLAFDAKRDQWLGYDPKEHTKTIARYDKIDE 183          
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Match: H3G9I3_PHYRM (Pre-mRNA-splicing factor SLU7 n=6 Tax=Phytophthora TaxID=4783 RepID=H3G9I3_PHYRM)

HSP 1 Score: 173 bits (439), Expect = 1.810e-46
Identity = 88/173 (50.87%), Postives = 125/173 (72.25%), Query Frame = 0
Query:    2 ADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSGPSLTHHSKQQAANELSMKDADAL-LQSKWEEARRAKQTATGFRKGACANCGAMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVEL--EQYGNVKFDAKRDRWQGYHPDQHKEVVERFQRIDD 171
            +DFK++++I E R+ G + PEQD   G +INPHNPEFI+KRPWYLGDSGPSL H + Q  A+ LS+++AD L ++ + +    A+Q    +RKGAC NCGAM HKT ECVERPR  K  AWKT  D+  D++ V++  E++G + FDAKRD+W GY P +H + +ER++++D+
Sbjct:   12 SDFKKKQEIEEARKNGTLPPEQDAD-GNLINPHNPEFISKRPWYLGDSGPSLKHQTLQHQAHLLSIQEADELYIKGRKQLTTTARQRK--WRKGACKNCGAMSHKTNECVERPR--KVGAWKTNKDLQSDEVVVDVRSEKFGKLAFDAKRDQWLGYDPKEHAKTIERYEKVDE 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5975.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLD5_9STRA1.860e-7166.67Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema mi... [more]
D7FU41_ECTSI1.170e-7065.88Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus T... [more]
A0A7S1UCF0_9STRA2.440e-5151.74Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=P... [more]
A0A7S2V1R9_9STRA2.150e-5059.33Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=F... [more]
A0A7S3HC70_9STRA3.110e-4751.95Pre-mRNA-splicing factor SLU7 n=1 Tax=Spumella elo... [more]
A0A7R9U7Z6_9STRA4.850e-4748.84Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=P... [more]
A0A484DY55_BRELC5.110e-4752.27Pre-mRNA-splicing factor SLU7 n=1 Tax=Bremia lactu... [more]
W2PIB2_PHYPN1.000e-4652.02Pre-mRNA-splicing factor SLU7 n=12 Tax=Phytophthor... [more]
K3X5L6_GLOUD1.090e-4652.00Pre-mRNA-splicing factor SLU7 n=1 Tax=Globisporang... [more]
H3G9I3_PHYRM1.810e-4650.87Pre-mRNA-splicing factor SLU7 n=6 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 168..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..281
NoneNo IPR availablePANTHERPTHR12942:SF2PRE-MRNA-SPLICING FACTOR SLU7coord: 3..260
IPR021715Pre-mRNA-splicing factor SLU7 domainPFAMPF11708Slu7coord: 143..277
e-value: 8.2E-11
score: 42.2
IPR039974Pre-mRNA-splicing factor SLU7PANTHERPTHR12942STEP II SPLICING FACTOR SLU7coord: 3..260
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 96..109
score: 8.581337
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 82..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5975contigP-wetherbeei_contig5975:2756..3598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5975.3.1mRNA_P-wetherbeei_contig5975.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5975 2753..3598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5975.3.1 ID=prot_P-wetherbeei_contig5975.3.1|Name=mRNA_P-wetherbeei_contig5975.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
MADFKQRKQIAEKRQAGQIEPEQDVSTGQMINPHNPEFITKRPWYLGDSG
PSLTHHSKQQAANELSMKDADALLQSKWEEARRAKQTATGFRKGACANCG
AMGHKTAECVERPRSNKKAAWKTGLDIAPDDMRVELEQYGNVKFDAKRDR
WQGYHPDQHKEVVERFQRIDDERRRRKLEEQQRHEEEKQKKLHEKEERAA
ARAARRAAAAALTASGASGDGEGGASGEGGAAAAGGGGGGGAAVASGNNN
GKGPEIDSPSEASDSDSDYDSDDDDDDDDHN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021715Slu7_dom
IPR039974Splicing_factor_SLU7
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf