prot_P-wetherbeei_contig5954.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5954.2.1
Unique Nameprot_P-wetherbeei_contig5954.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length231
Homology
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BLAST of mRNA_P-wetherbeei_contig5954.2.1 vs. uniprot
Match: A0A6H5L1V5_9PHAE (BTP domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V5_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.140e-16
Identity = 78/249 (31.33%), Postives = 107/249 (42.97%), Query Frame = 0 
Query:   12 DGESDG--FARRITAQAVARACLALDIIEAPPLAIAAVTDATASFIDRVGAFAKAAAEAGGRVEPNLTDFLAAFQMLSPPIRWQDIRYFA---------------EGDEATHP---------------------WQQPFHHAVPNFPVRKRRRVEEARAVSGLGAPSSPGPGSTTPGSDDACELPRPPHVPAFMPPLPPLQTFRSTPVPSLGPPPSHQLMRQERIKRSAQAKEALQRILVGNEAQGSSA 222
            +GE D   FAR +T QAVA  C+A+        A+  +TD    +++ +           GR EPN+ D L  FQ +  P+ W ++R FA                G  +  P                     W QPFHHAVP FP+ ++R         G  A ++ GP S            RPPH+PAFMPPLPP  T R     S G   S   +R ER+KR  Q + AL+ +     A G++A
Sbjct:   24 EGEVDSAQFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDFAFSEDGYSNRYDNAASSGSGSAAPAANXXXXXRAAGGGRQELPKRWDQPFHHAVPPFPMPRKRAAPWDHGEEGEEA-ATEGPRS------------RPPHIPAFMPPLPP-STKRGA---SAGSDRSLAEIRLERLKRQRQGETALRSLGAPGAAAGATA 255
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5954.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1V5_9PHAE2.140e-1631.33BTP domain-containing protein (Fragment) n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006565Bromodomain associated domainPFAMPF07524Bromo_TPcoord: 17..86
e-value: 2.0E-7
score: 30.9
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 12..102
e-value: 6.1E-9
score: 37.4
IPR019473Transcription factor TFIID, subunit 8, C-terminalPFAMPF10406TAF8_Ccoord: 162..210
e-value: 4.3E-8
score: 33.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..187
NoneNo IPR availablePANTHERPTHR46338:SF1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8coord: 9..211
IPR037818Transcription initiation factor TFIID subunit 8PANTHERPTHR46338TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8coord: 9..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5954contigP-wetherbeei_contig5954:790..1482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5954.2.1mRNA_P-wetherbeei_contig5954.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5954 622..1716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5954.2.1 ID=prot_P-wetherbeei_contig5954.2.1|Name=mRNA_P-wetherbeei_contig5954.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp
MEGGSSSARLSDGESDGFARRITAQAVARACLALDIIEAPPLAIAAVTDA
TASFIDRVGAFAKAAAEAGGRVEPNLTDFLAAFQMLSPPIRWQDIRYFAE
GDEATHPWQQPFHHAVPNFPVRKRRRVEEARAVSGLGAPSSPGPGSTTPG
SDDACELPRPPHVPAFMPPLPPLQTFRSTPVPSLGPPPSHQLMRQERIKR
SAQAKEALQRILVGNEAQGSSAGRSSLGEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006565BTP
IPR009072Histone-fold
IPR019473TFIID_su8_C
IPR037818TAF8