prot_P-wetherbeei_contig5951.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5951.1.1
Unique Nameprot_P-wetherbeei_contig5951.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length766
Homology
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BLAST of mRNA_P-wetherbeei_contig5951.1.1 vs. uniprot
Match: A0A835YZQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ0_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.090e-13
Identity = 65/203 (32.02%), Postives = 100/203 (49.26%), Query Frame = 0 
Query:    9 LLHNPWISDQLRSILREEQGADGTP-------LVSSPKIVQCIAADDSLSLVVITDTQISIPGILTPAARTEFARRYRGRSFANLAGATLKLESWHFSTVALCA--CNPEPAKG---LRGPLCLQVGGVEVVGPQNASTRGNPVDVNNWPPVRDALQPA-----------RR-----QHLLAILARRQGMQALPDAEGVPSRA 183
            +L  PW+ + L  +L++    + T        + +  +++QC+       L+ ++D+Q ++   LTPAA  + A  +   S + LA + ++LE WH+STVA C    +  PA+    L  PLCL VG V  +G +  ST G+P D+N    V  AL              RR     + L+A L R Q M+ L DA GVP RA
Sbjct:    1 MLGRPWLRNHLLQVLQDGDAGNSTSAPKRTRGVTNGRRMMQCVWVKQEPRLLYLSDSQHAVAAKLTPAAVRKLAAAHN-TSLSALAHSIVRLERWHWSTVAACGEPLSDRPARAGYALTLPLCLHVGDVTPIGARGTSTSGDPRDINTDERVTAALARVGAGXXXXXXXXRRGGESHRALVAQLERAQAMECLLDAAGVPCRA 202
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5951.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YZQ0_9STRA6.090e-1332.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 370..390
NoneNo IPR availableGENE3D2.40.50.960coord: 8..162
e-value: 2.1E-5
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..501
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 684..765
IPR019437Shelterin complex subunit TPP1/Est3PFAMPF10341TPP1coord: 13..96
e-value: 3.1E-6
score: 27.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5951contigP-wetherbeei_contig5951:845..3373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5951.1.1mRNA_P-wetherbeei_contig5951.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5951 832..3405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5951.1.1 ID=prot_P-wetherbeei_contig5951.1.1|Name=mRNA_P-wetherbeei_contig5951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=766bp
MPNDGMSGLLHNPWISDQLRSILREEQGADGTPLVSSPKIVQCIAADDSL
SLVVITDTQISIPGILTPAARTEFARRYRGRSFANLAGATLKLESWHFST
VALCACNPEPAKGLRGPLCLQVGGVEVVGPQNASTRGNPVDVNNWPPVRD
ALQPARRQHLLAILARRQGMQALPDAEGVPSRAEPWTDGRNPMVPEPDEA
DGGNGGTPRGGARATNSPKSGSGSRVAAAATAVAAAFGGVLRGAVGIGRW
AVTPHNDDDDDNADDDDEDGEFETQEPTQNMFASQLAYELTDLPTQDEGG
GAENGGGGCGGDGGSSSSGGGGGNASSSAEGHAGSAHEGVEGEGDGNGGG
FDRRAVARWHGGGGAVAAGAEEDEKEVENERNESSRWLTQQWQADGDSAP
QSAPELEPLGSDEEGRGDDDDQETLPEYMPEPAEAAGDAAAESRGMGAGM
DPAAAASGGCGGGGCAASGFCAAGEAAADGGNGGGESPSQRLGSLDWQEN
RQPGATGYLGAASQHGAGGVAAAHEAAAGPGVAAAAASPAAAVAAAGAPA
ATPAAAFFRLSQHPTPPLQLQLSATQQPRLRAVAAGRLAPQPLSSRLTNV
DPRFTTGYFAEWLDNDPYAERTRQIVANGRHGSLREFFAGTPAPPPGSGC
RMPAWLVGPPQPPAGSAPRAAAVAAAGTGGPLQSPVFENWLNAASQPQND
PPPAAAAGWAATPGSANCERVGKRSAPVGSPDGSFQGSAKRPDISEDSGN
AEEGHPPAAPQSGVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019437TPP1/Est3