prot_P-wetherbeei_contig5938.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5938.1.1
Unique Nameprot_P-wetherbeei_contig5938.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length107
Homology
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A0A835YVT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.350e-19
Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 0
Query:    9 GVKPENYVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPLRTGGEIHAQ 100
            GV+PE YV   +L ++ A     W   LD++ DE   RAY+YAS TVAD+DGD   EVV+ TA G +Y L+A++G+VR GFP++ G EI AQ
Sbjct:  254 GVRPEKYVGGGLLAFDFALQDWLWTVHLDLTTDETRHRAYIYASPTVADLDGDGHLEVVVSTAMGLVYALDAESGEVRKGFPVQFG-EIQAQ 344          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A0A8J5KSP1_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KSP1_ZINOF)

HSP 1 Score: 75.1 bits (183), Expect = 1.170e-13
Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    9 GVKPENYVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPLRTGGEIHAQA 101
            G+  E YVAS ++ +N  +  ++W + LD+SVD  +SRAYVY+S TV D+DGD   ++++GT+ G  Y+L+   G VR+ F L    EI A A
Sbjct:  254 GINIEKYVASGIVVFNLDTKQVKWIQDLDLSVDSGNSRAYVYSSPTVVDLDGDGKLDILVGTSYGLFYILDHH-GQVRNKFSLEMA-EIQAPA 344          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A0A6I9RAM0_ELAGV (protein DEFECTIVE IN EXINE FORMATION 1 isoform X1 n=5 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RAM0_ELAGV)

HSP 1 Score: 71.2 bits (173), Expect = 3.470e-12
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    9 GVKPENYVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPL 91
            G+  E YVA+ ++ +N  +  ++W   LD+S++ ASS AY+Y+S TV D+DGD   ++++GT+ G  Y+L+   G VR  FPL
Sbjct:  412 GIDIEKYVATGIVVFNLDTKHVKWTADLDLSMETASSPAYIYSSPTVVDLDGDGNMDILVGTSYGLFYILD-HRGKVREKFPL 493          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A0A834WLS8_9FABA (Protein DEFECTIVE IN EXINE FORMATION 1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WLS8_9FABA)

HSP 1 Score: 70.5 bits (171), Expect = 6.490e-12
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   15 YVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPL 91
            YVA A++ +N  +  ++W   LD+S D A+ RAY+YAS TV D+DGD   ++++GT+ G  YVL+   G VR  FPL
Sbjct:  453 YVAGAIVVFNLDTKQVKWTTELDLSTDTANFRAYLYASPTVVDLDGDGNLDILVGTSYGLFYVLDHH-GKVREKFPL 528          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: UPI0010A56DB5 (protein DEFECTIVE IN EXINE FORMATION 1 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A56DB5)

HSP 1 Score: 70.1 bits (170), Expect = 8.850e-12
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   15 YVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPL 91
            YVA A++ +N  +  ++W   LD+S D A+ RAY+YAS T+ D+DGD   ++++GT+ G  YVL+   G VR  FPL
Sbjct:  446 YVAGAIVVFNLDTKQVKWTTELDLSTDTANFRAYIYASPTLVDLDGDGNLDILVGTSYGLFYVLDHH-GKVREKFPL 521          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A0A8J9WNC4_9CHLO (Probable protein DEFECTIVE IN EXINE FORMATION 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNC4_9CHLO)

HSP 1 Score: 69.7 bits (169), Expect = 1.210e-11
Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 0
Query:   14 NYVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPLRTG 94
            NYVA  ++ +N+ +  ++W + LD+S D  + +AYV AS T+ADI+GD   EV+IGT  G +YVL+ + G    G+PL+ G
Sbjct:  415 NYVAGGIVVFNSRTRTVKWQQHLDLSTDRTAFKAYVQASPTLADINGDGKLEVIIGTNMGFVYVLDCE-GRTVEGWPLQMG 494          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A0A6I9U3G9_SESIN (LOW QUALITY PROTEIN: protein DEFECTIVE IN EXINE FORMATION 1 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9U3G9_SESIN)

HSP 1 Score: 69.7 bits (169), Expect = 1.210e-11
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    9 GVKPENYVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPL 91
            G+    YVA  ++ +N  +  ++W  +LD+S D    RAY+Y+S TVAD+DGD  +++++GT+ G  YVL+   G  R  FPL
Sbjct:  424 GIDIGKYVAGGIVVFNLDTKQVKWTAQLDLSTDTGDFRAYIYSSPTVADLDGDGNFDILVGTSFGLFYVLD-HKGKTREKFPL 505          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A0A251RY52_HELAN (Putative defective in exine formation protein (DEX1) n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RY52_HELAN)

HSP 1 Score: 69.3 bits (168), Expect = 1.650e-11
Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   15 YVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPL 91
            YV   ++ +N  +  ++W   LD+S D A  RAY+YAS TV D+DGD   ++++GT+ G  YVL+   G VR  FPL
Sbjct:  431 YVGGGIVVFNLETKQVKWTAELDLSTDTAKYRAYIYASPTVVDLDGDGYLDILVGTSYGLFYVLD-HKGKVREKFPL 506          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: I0Z0G7_COCSC (Integrin alpha N-terminal domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0G7_COCSC)

HSP 1 Score: 67.0 bits (162), Expect = 1.060e-10
Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:   15 YVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPLRTG 94
            YVA  ++ +N+ +  ++W + LD+S D  + +AY+ AS T+ADI+GD   E++IGT  G +YVL+ + G    G+PL+ G
Sbjct:  363 YVAGGIVVFNSRTRTIKWQQHLDLSTDRTAFKAYIQASPTLADINGDGKLEIIIGTNMGFVYVLDCE-GRTVEGWPLQMG 441          
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Match: A4S275_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S275_OSTLU)

HSP 1 Score: 55.5 bits (132), Expect = 1.200e-6
Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   10 VKPENYVASAVLCYNAASGGLEWARRLDISVDEASSRAYVYASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPLRTGGEIHAQAS 102
            V P+ Y A+A++  N      + +  LD S   A  +A  YA  T+ D+DGD   ++VIGT AG L+V++  +G+   G+P R G ++ AQ +
Sbjct:  308 VDPKQYAATALVVLNGEDLSTKRSIALDQSAATALFKARAYAPPTLVDVDGDGRLDIVIGTYAGVLHVVDGVSGNPLPGWPRRLG-QMEAQVT 399          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5938.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YVT5_9STRA4.350e-1950.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J5KSP1_ZINOF1.170e-1343.01Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A6I9RAM0_ELAGV3.470e-1240.96protein DEFECTIVE IN EXINE FORMATION 1 isoform X1 ... [more]
A0A834WLS8_9FABA6.490e-1245.45Protein DEFECTIVE IN EXINE FORMATION 1 n=1 Tax=Sen... [more]
UPI0010A56DB58.850e-1244.16protein DEFECTIVE IN EXINE FORMATION 1 n=1 Tax=Pro... [more]
A0A8J9WNC4_9CHLO1.210e-1143.21Probable protein DEFECTIVE IN EXINE FORMATION 1 n=... [more]
A0A6I9U3G9_SESIN1.210e-1139.76LOW QUALITY PROTEIN: protein DEFECTIVE IN EXINE FO... [more]
A0A251RY52_HELAN1.650e-1142.86Putative defective in exine formation protein (DEX... [more]
I0Z0G7_COCSC1.060e-1040.00Integrin alpha N-terminal domain-containing protei... [more]
A4S275_OSTLU1.200e-635.48Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 8..104
e-value: 2.4E-8
score: 35.5
NoneNo IPR availablePANTHERPTHR21419:SF23PROTEIN DEFECTIVE IN EXINE FORMATION 1coord: 9..101
IPR045232Protein FAM234PANTHERPTHR21419FAMILY NOT NAMEDcoord: 9..101
IPR028994Integrin alpha, N-terminalSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 19..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5938contigP-wetherbeei_contig5938:361..1326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5938.1.1mRNA_P-wetherbeei_contig5938.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5938 65..1326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5938.1.1 ID=prot_P-wetherbeei_contig5938.1.1|Name=mRNA_P-wetherbeei_contig5938.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp
YKIHPPVPGVKPENYVASAVLCYNAASGGLEWARRLDISVDEASSRAYVY
ASATVADIDGDSIYEVVIGTAAGALYVLNADTGDVRSGFPLRTGGEIHAQ
ASFGHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR045232FAM234
IPR028994Integrin_alpha_N