prot_P-wetherbeei_contig585.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig585.3.1
Unique Nameprot_P-wetherbeei_contig585.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length266
Homology
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: A0A6H5JU59_9PHAE (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU59_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.140e-23
Identity = 81/232 (34.91%), Postives = 111/232 (47.84%), Query Frame = 0
Query:    2 TEENAVVSTMPHPPDYFKLFWSTKRKGAVPAAELAAEDGVGTDAKCAT---SXXXXXXXXXXXXXXXXXXXXGDGETYTVFGTTYTNEFRIEDLLPKEKLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEERRMVARLESEMERAIAAIETA 230
            TEE  VV  +P PP Y+KLF         P A L  +D VG  A  A    S                    G GETY +FG  Y++E   ++LLP EK++               P SG                  +++R  ++ LL SIMANY Q +++LV  P    +K+ D+E LFVNFHSLLNRYR HQAR  +  R+R Q  E   +++ LE+ M +  +A E+A
Sbjct:    3 TEEAKVVDAVPPPPAYYKLF--------SPGASLTGQD-VGASAAIAAPGDSAGGAGGTAPNEFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVV--------------PASG----------------QAIDFRAGLKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAEENDAVMSTLEAAMHQCTSAQESA 195          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: A0A6U1QAX8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QAX8_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.570e-23
Identity = 62/154 (40.26%), Postives = 86/154 (55.84%), Query Frame = 0
Query:   75 TYTVFGTTYTNEFRIEDLLPKEKLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEERRMVARLESEMERAIAAIE 228
            +Y  FG  Y+ E  I  L+P EK L    D  D                               +R EMQ+LL SIMANY QLLD+L+ CP+ Q +KV++LE LFVNFHS+LN++R HQARE +  R+++Q  +E++ +A LES+ME     +E
Sbjct:   37 SYASFGIPYSAEAFIPTLVPDEKKLGPKQDDLDRN-----------------------------FRSEMQKLLQSIMANYVQLLDILIECPSQQSRKVEELEQLFVNFHSILNQFRQHQAREMVLVRLKRQKKDEQKALAMLESQMEAVRQVVE 161          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: F0WF41_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF41_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.670e-17
Identity = 59/169 (34.91%), Postives = 94/169 (55.62%), Query Frame = 0
Query:   76 YTVFGTTYTNEFRIEDLLPKE-KLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEE-------RRMVARLESEMERAIAAIETAGRDLLL 236
            Y +FGT Y+ +  + DLLP + K L+L                       S T A   A   ++Y+ ++++L  S++AN  QLLDVL+R P +  +KVDDLELLFVN H+L+N++R HQARE +   +R Q+ E+       RR++     ++ERA +A++   +  L+
Sbjct:   44 YHMFGTPYSTKDVVPDLLPDDSKKLYL-----------------------SDTSAQDPAPQAIDYKAQLKKLNRSLLANCIQLLDVLIRNPKVFNEKVDDLELLFVNMHNLINKFRPHQAREMIIQLLRGQIEEKQAAINDIRRVLIESREQVERAHSALDVDNQPALM 189          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: D8LAU4_ECTSI (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU4_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 5.860e-16
Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 0
Query:   78 VFGTTYTNEFRIEDLLPKEKLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEERRMVARLESEMERAIAAIETA 230
            +FG  Y++E   ++LLP EK++               P SG                  +++R E++ LL SIMANY Q +++LV  P    +K+ D+E LFVNFHSLLNRYR HQAR  +  R+R Q  E   +++ LE+ M +  +A E A
Sbjct:    1 MFGMPYSSEPVEQELLPPEKIVV--------------PASG----------------QAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGA 123          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: H3GJZ4_PHYRM (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJZ4_PHYRM)

HSP 1 Score: 84.0 bits (206), Expect = 6.430e-15
Identity = 53/182 (29.12%), Postives = 93/182 (51.10%), Query Frame = 0
Query:   75 TYTVFGTTYTNEFRIEDLLPKEKLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEERRMVARLESEMERAIAAIETAGRDLLLGCPAGGDDSGVRPAAAGADV 256
            TY +FG+ Y+ +  + DLLP +KL    G+  D ++                          ++Y+ EM+++  S++AN+ +L+DVL++ P +  +K+DD+ELLF+N H+L+N +R HQARE +   ++ QV E R     +   ++ +  A+E    +L           G  PA +  DV
Sbjct:  183 TYHMFGSPYSTQDVVPDLLPGKKLYAPAGEEGDEDAP-------------------------VDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINSFRPHQARETVIQMLKTQVQERRDAARDIRRTIDESRQAVERVHGELHESTDDAAAADGAAPAGSDEDV 339          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: G4ZE03_PHYSP (Mediator of RNA polymerase II transcription subunit 7 (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZE03_PHYSP)

HSP 1 Score: 82.0 bits (201), Expect = 1.300e-14
Identity = 56/184 (30.43%), Postives = 94/184 (51.09%), Query Frame = 0
Query:   75 TYTVFGTTYTNEFRIEDLLPK--EKLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEERRMVARLESEMERAIAAIETAGRDLLLGCPAGGDDSGVRPAAAGADV 256
            TY +FG+ Y+ +  + DLLP+  +KL    GD  D                       AV    ++Y+ +M+++  S++AN+ +L+DVL++ PT+  +K+DD+ELLF+N H+L+N +R HQARE +   ++ QV E R     +   ++ +  A+E    +L           G  PA    DV
Sbjct:   96 TYHMFGSPYSTQDVVPDLLPQPGKKLYAPEGDEGDA----------------------AV----VDYKAQMKKINRSLLANFVELVDVLIKKPTMFNEKLDDIELLFLNMHNLINAFRPHQARETVIQMLKTQVQERRDAARDIRRTIDESRLAVERVHGELHESTDDAAAADGASPAGTDEDV 253          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: A0A6G0XE19_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE19_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-14
Identity = 65/239 (27.20%), Postives = 99/239 (41.42%), Query Frame = 0
Query:    1 MTEENAVVSTMPHPPDYFKLFWSTKRKGAVPAAELAAEDGVGTDAKCATSXXXXXXXXXXXXXXXXXXXXGDGETYTVFGTTYTNEFRIEDLLPKEKLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEERRMVARLESEMERAIAAIETAGRDLLLGCP 239
            M++E  +VS  P PP +F L+      G  P A L                                       TY  FGT Y+ E  + DLLP +K L+                                     + + EM+++  S+M ++ +L+DVLV  PT    K+DD+ELLF+N H+L+N YR HQARE L   ++QQ+ + +   A +   +E + AA+  A   L +  P
Sbjct:    1 MSDEPELVSAFPAPPAFFNLYADGVDAGPAPPAPLKP-------------------------------------TYHSFGTPYSTEDTVPDLLPDDKKLYEPTH---------------------------------DVKEEMKKVNRSLMFSFLELIDVLVMNPTKFNAKLDDIELLFLNMHNLINAYRPHQARETLIELLKQQIQDRKDAAAEIRRTIEESKAAVLAAHSALDVETP 169          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: A0A6A3XWY7_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XWY7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.110e-14
Identity = 56/184 (30.43%), Postives = 94/184 (51.09%), Query Frame = 0
Query:   75 TYTVFGTTYTNEFRIEDLLPK--EKLLFLHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEERRMVARLESEMERAIAAIETAGRDLLLGCPAGGDDSGVRPAAAGADV 256
            TY +FG+ Y+ +  + DLLP+  +K+    GD  D                     A+AV     +Y+ +M+++  S++AN+ +L+DVL++ P +  +K+DD+ELLF+N H+L+N +R HQARE +   ++ QV E R     +   ++ +  A+E    DL           G  PA    DV
Sbjct:   41 TYHMFGSPYSTQDVVPDLLPQPGKKVYAPEGDEGD---------------------AAAV-----DYKAQMKKINRSLLANFVELVDVLIKKPAMFNEKLDDIELLFLNMHNLINGFRPHQARETVIQMLKTQVQERRDAARDIRRTIDESRLAVERVHGDLHESTDDAAAADGASPAGTDEDV 198          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: A0A8K1CA38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA38_PYTOL)

HSP 1 Score: 80.9 bits (198), Expect = 2.110e-14
Identity = 49/138 (35.51%), Postives = 82/138 (59.42%), Query Frame = 0
Query:   75 TYTVFGTTYTNEFRIEDLLPKE-KLLFLHG-DAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEER 210
            TY +FGT Y+ +  + DLLP+  K L+L G D+   ES                       S+ ++Y+ +M+++  S++AN+ +L+DVL++ P+L  +K+ DLELLF+N H+L+N +R HQARE +   ++ Q+ E R
Sbjct:   52 TYHMFGTPYSTKDVVPDLLPQPGKKLYLDGKDSVPGES-----------------------SEVIDYKAQMKKINHSLLANFTELVDVLIKKPSLFNEKLADLELLFLNMHNLINAFRPHQARETIIHMLKTQINERR 166          
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Match: A0A024GGG9_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGG9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.040e-14
Identity = 56/162 (34.57%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   76 YTVFGTTYTNEFRIEDLLPKE-KLLFLHG-DAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSIMANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAGRMRQQVAEE-------RRMVARLESEMERAIAAIE 228
            Y +FGT Y+ +  + DLLP + K L+L      D +  S                        ++Y+ ++++L  S++AN  QLLDVL+R P L  +KVDDLELLFVN H+L+N++R HQARE +   ++ Q+ E+       RR++     ++ERA +A++
Sbjct:   67 YHMFGTPYSTKDIVPDLLPDDSKKLYLPTLSTQDPKEQS------------------------IDYKAQLKKLNRSLLANCIQLLDVLIRNPKLFNEKVDDLELLFVNMHNLINKFRPHQAREHIILMLQSQIEEKQAAISDFRRVLEESREQVERAHSALD 204          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig585.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU59_9PHAE1.140e-2334.91Mediator of RNA polymerase II transcription subuni... [more]
A0A6U1QAX8_9STRA3.570e-2340.26Mediator of RNA polymerase II transcription subuni... [more]
F0WF41_9STRA5.670e-1734.91Mediator of RNA polymerase II transcription subuni... [more]
D8LAU4_ECTSI5.860e-1636.60Mediator of RNA polymerase II transcription subuni... [more]
H3GJZ4_PHYRM6.430e-1529.12Mediator of RNA polymerase II transcription subuni... [more]
G4ZE03_PHYSP1.300e-1430.43Mediator of RNA polymerase II transcription subuni... [more]
A0A6G0XE19_9STRA1.500e-1427.20Mediator of RNA polymerase II transcription subuni... [more]
A0A6A3XWY7_9STRA2.110e-1430.43Mediator of RNA polymerase II transcription subuni... [more]
A0A8K1CA38_PYTOL2.110e-1435.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GGG9_9STRA5.040e-1434.57Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..75
IPR009244Mediator complex, subunit Med7PFAMPF05983Med7coord: 9..223
e-value: 2.8E-32
score: 112.4
IPR009244Mediator complex, subunit Med7PANTHERPTHR21428MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7coord: 2..231
IPR044888Mediator complex, subunit Med7 superfmailyGENE3D6.10.140.200coord: 128..228
e-value: 2.2E-25
score: 90.4
IPR037212Mediator complex, subunit Med7/Med21-likeSUPERFAMILY140718Mediator hinge subcomplex-likecoord: 137..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig585contigP-wetherbeei_contig585:5137..7172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig585.3.1mRNA_P-wetherbeei_contig585.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig585 4920..7666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig585.3.1 ID=prot_P-wetherbeei_contig585.3.1|Name=mRNA_P-wetherbeei_contig585.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MTEENAVVSTMPHPPDYFKLFWSTKRKGAVPAAELAAEDGVGTDAKCATS
SSSSGGGGGGGFPLAPPPPPGDGETYTVFGTTYTNEFRIEDLLPKEKLLF
LHGDAADTESASGRPGSGASCSRSSGTGASAVASDGMEYRREMQRLLGSI
MANYRQLLDVLVRCPTLQGKKVDDLELLFVNFHSLLNRYRVHQAREQLAG
RMRQQVAEERRMVARLESEMERAIAAIETAGRDLLLGCPAGGDDSGVRPA
AAGADVAAAGAAADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009244Mediatior_Med7
IPR044888Mediatior_Med7_sf
IPR037212Med7/Med21-like