prot_P-wetherbeei_contig5820.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5820.1.2
Unique Nameprot_P-wetherbeei_contig5820.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length232
Homology
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BLAST of mRNA_P-wetherbeei_contig5820.1.2 vs. uniprot
Match: UPI001F5DE0C5 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DE0C5)

HSP 1 Score: 67.0 bits (162), Expect = 3.370e-9
Identity = 62/248 (25.00%), Postives = 101/248 (40.73%), Query Frame = 0 
Query:    3 SDIRQFFVNFKRLPCIRRILSPAAKTQATKSLLRDDANNIIQWLQQMG--DDGCRDARLLDDDGRLAAVLWSTKKQELA-KLYGQVVIPDKPFKTNRGKW-------------SVCQG--FLRKEDIAAFVWAFNNYLKWCCDGGWYPPDVILANGAKPATAAIKENMPSTKHFLYPWHLFKNLKEHTDKHLHGNQDLLRACRTTFRSA-ECAATSEEFEACWGKFTA-FHLPDGMKTYLSGLHERRE 230
            S I  FF + + +P  +R L     +  ++    DD       + +M   D   RD+ L+DD+GR+ A++W+  K  +  + +G  +  D  ++TN+                S+  G   L  E++  F W F  ++      G  PP  IL +  +    AI   +P T H    WH+ +  KEH    L          R  F    E   T EEFE  W      + L D    +++ ++E RE
Sbjct:  128 SVIGSFFGSMENIPFNKRSLRTLCAS-ISRDHSDDDMRKTYDVMSEMKMKDPNFRDSCLVDDEGRIRALMWTNGKSRMQYQQFGDAITFDTTYRTNQYDMPFGLFVGVNNHFQSILLGAVLLMNENMETFEWVFKEFVSLM---GGKPPVTILTDQCRAMEIAISAVLPDTTHRWCKWHVLRKAKEH----LGSFYSKAAGFRDEFHKILEYMVTVEEFEHAWSILVEKYGLED--HPFITQIYEVRE 365
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5820.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001F5DE0C53.370e-925.00protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Loliu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5820contigP-wetherbeei_contig5820:1819..3229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5820.1.2mRNA_P-wetherbeei_contig5820.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5820 156..3686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5820.1.2 ID=prot_P-wetherbeei_contig5820.1.2|Name=mRNA_P-wetherbeei_contig5820.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=232bp
MVSDIRQFFVNFKRLPCIRRILSPAAKTQATKSLLRDDANNIIQWLQQMG
DDGCRDARLLDDDGRLAAVLWSTKKQELAKLYGQVVIPDKPFKTNRGKWS
VCQGFLRKEDIAAFVWAFNNYLKWCCDGGWYPPDVILANGAKPATAAIKE
NMPSTKHFLYPWHLFKNLKEHTDKHLHGNQDLLRACRTTFRSAECAATSE
EFEACWGKFTAFHLPDGMKTYLSGLHERREM*
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