prot_P-wetherbeei_contig5796.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5796.1.1
Unique Nameprot_P-wetherbeei_contig5796.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length234
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig5796.1.1 vs. uniprot
Match: D8LJ23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ23_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 2.020e-10
Identity = 46/93 (49.46%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:   11 AADGSGAPLRVHLRQWGCAFTEGLWAAVLAAFAAAPAELLAGPAGAAAGVDRLWDEYARLLVVQREYGNAGAEPVAALAVDLAALLARIDDCG 103
            A  G GA + VH+R WG  FTE +WA VL A  AAPA L+ G AG AAGV +L + Y  L+ VQ    N G E VA LAV+L  LL  + + G
Sbjct: 1788 AVGGKGAAVLVHIRLWGQYFTEAVWAGVLGALRAAPALLVGGAAGQAAGVPKLLEAYVNLVAVQLMVDN-GPE-VAQLAVNLRELLEGLGEMG 1878
[Close]
BLAST of mRNA_P-wetherbeei_contig5796.1.1 vs. uniprot
Match: A0A6H5L4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X7_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 9.630e-9
Identity = 46/96 (47.92%), Postives = 56/96 (58.33%), Query Frame = 0 
Query:   11 AADGSGAPL---RVHLRQWGCAFTEGLWAAVLAAFAAAPAELLAGPAGAAAGVDRLWDEYARLLVVQREYGNAGAEPVAALAVDLAALLARIDDCG 103
            A  G GA +    VH+R WG  FTE +WA VL A  AAPA L+ G AG AAGV +L + Y  L+ VQ    N G E VA LAV+L  LL  + + G
Sbjct: 1159 AVGGKGAAVLVSEVHVRLWGQYFTEAVWAGVLGALRAAPALLVGGAAGQAAGVPKLLEAYVNLVAVQLMVDN-GPE-VAQLAVNLRELLEGLGEMG 1252
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5796.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ23_ECTSI2.020e-1049.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4X7_9PHAE9.630e-947.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5796contigP-wetherbeei_contig5796:2172..2873 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5796.1.1mRNA_P-wetherbeei_contig5796.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5796 2172..2952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5796.1.1 ID=prot_P-wetherbeei_contig5796.1.1|Name=mRNA_P-wetherbeei_contig5796.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp
TTETPPIVATAADGSGAPLRVHLRQWGCAFTEGLWAAVLAAFAAAPAELL
AGPAGAAAGVDRLWDEYARLLVVQREYGNAGAEPVAALAVDLAALLARID
DCGNGSGGGASGENGGGGEGSLKGGTLKGDANIHGGESREDRGDAAGAQE
GDGSRRKKRKTPIWQGRLDRRVPGLWERWSIRRVLETFLSVSDGSGDEKA
ASAVDAPAADEADGGEAAAGAEQALSVGSPFDW*
back to top