prot_P-wetherbeei_contig57774.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57774.1.1
Unique Nameprot_P-wetherbeei_contig57774.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length54
Homology
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: UPI001C028DDA (ABC transporter permease n=3 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001C028DDA)

HSP 1 Score: 95.1 bits (235), Expect = 1.860e-22
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGAQFGIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGKLINLLE RLLHWR
Sbjct:  225 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKLINLLETRLLHWR 277          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: UPI0015761241 (ABC transporter permease n=1 Tax=Bradyrhizobium sp. S69 TaxID=1641856 RepID=UPI0015761241)

HSP 1 Score: 94.7 bits (234), Expect = 2.650e-22
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGA+FGIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGKLIN+LE+RLLHWR
Sbjct:  226 MIGAEFGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKLINMLEVRLLHWR 278          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: A0A4Q8R015_9BRAD (ABC transporter permease n=26 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A4Q8R015_9BRAD)

HSP 1 Score: 94.0 bits (232), Expect = 5.580e-22
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGAQ+GIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGKLINLLE RLLHWR
Sbjct:  230 MIGAQYGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKLINLLEARLLHWR 282          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: A0A4U6RHH9_BRAEL (ABC transporter permease n=58 Tax=Proteobacteria TaxID=1224 RepID=A0A4U6RHH9_BRAEL)

HSP 1 Score: 94.0 bits (232), Expect = 5.580e-22
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGAQ+GIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGKLINLLE RLLHWR
Sbjct:  230 MIGAQYGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKLINLLEARLLHWR 282          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: A0A533JEZ5_9BRAD (ABC transporter permease n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533JEZ5_9BRAD)

HSP 1 Score: 93.6 bits (231), Expect = 7.580e-22
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGAQFGIGAFVLQAGNLMQTDQLLAGVV+LS+ GLA+GKLINLLE RLLHWR
Sbjct:  228 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVILSVFGLAIGKLINLLEARLLHWR 280          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: A0A1M6SWF3_9BRAD (NitT/TauT family transport system permease protein n=2 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1M6SWF3_9BRAD)

HSP 1 Score: 92.8 bits (229), Expect = 1.610e-21
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGA++GIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGKLINLLE RLLHWR
Sbjct:  233 MIGAEYGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKLINLLETRLLHWR 285          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: UPI001BAC113E (ABC transporter permease n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BAC113E)

HSP 1 Score: 92.4 bits (228), Expect = 1.930e-21
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGAQ+GIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGKLIN+LE RLLHWR
Sbjct:  223 MIGAQWGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKLINMLEARLLHWR 275          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: A0A1B1U8P6_9BRAD (ABC transporter permease n=19 Tax=Bradyrhizobium TaxID=374 RepID=A0A1B1U8P6_9BRAD)

HSP 1 Score: 92.0 bits (227), Expect = 2.660e-21
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGAQFGIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGK IN+LE RLLHWR
Sbjct:  222 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKAINVLEARLLHWR 274          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: UPI001BCF764F (ABC transporter permease n=1 Tax=Bradyrhizobium sp. dw_411 TaxID=2720082 RepID=UPI001BCF764F)

HSP 1 Score: 91.7 bits (226), Expect = 3.920e-21
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGAQFGIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVG+LIN LE RLLHWR
Sbjct:  225 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGRLINWLETRLLHWR 277          
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Match: A0A1H1ZNB4_9BRAD (NitT/TauT family transport system permease protein n=1 Tax=Bradyrhizobium canariense TaxID=255045 RepID=A0A1H1ZNB4_9BRAD)

HSP 1 Score: 91.7 bits (226), Expect = 3.980e-21
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLLHWR 53
            MIGA+FGIGAFVLQAGNLMQTDQLLAGVV+LSL GLAVGKLIN LE RLLHWR
Sbjct:  226 MIGAEFGIGAFVLQAGNLMQTDQLLAGVVILSLFGLAVGKLINWLETRLLHWR 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57774.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C028DDA1.860e-2294.34ABC transporter permease n=3 Tax=unclassified Brad... [more]
UPI00157612412.650e-2290.57ABC transporter permease n=1 Tax=Bradyrhizobium sp... [more]
A0A4Q8R015_9BRAD5.580e-2292.45ABC transporter permease n=26 Tax=Bradyrhizobiacea... [more]
A0A4U6RHH9_BRAEL5.580e-2292.45ABC transporter permease n=58 Tax=Proteobacteria T... [more]
A0A533JEZ5_9BRAD7.580e-2290.57ABC transporter permease n=1 Tax=Bradyrhizobium ic... [more]
A0A1M6SWF3_9BRAD1.610e-2190.57NitT/TauT family transport system permease protein... [more]
UPI001BAC113E1.930e-2190.57ABC transporter permease n=1 Tax=Bradyrhizobium la... [more]
A0A1B1U8P6_9BRAD2.660e-2190.57ABC transporter permease n=19 Tax=Bradyrhizobium T... [more]
UPI001BCF764F3.920e-2190.57ABC transporter permease n=1 Tax=Bradyrhizobium sp... [more]
A0A1H1ZNB4_9BRAD3.980e-2190.57NitT/TauT family transport system permease protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57774contigP-wetherbeei_contig57774:130..291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57774.1.1mRNA_P-wetherbeei_contig57774.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57774 1..385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57774.1.1 ID=prot_P-wetherbeei_contig57774.1.1|Name=mRNA_P-wetherbeei_contig57774.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=54bp
MIGAQFGIGAFVLQAGNLMQTDQLLAGVVVLSLSGLAVGKLINLLEIRLL
HWR*
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