prot_P-wetherbeei_contig57145.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57145.1.1
Unique Nameprot_P-wetherbeei_contig57145.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length157
Homology
BLAST of mRNA_P-wetherbeei_contig57145.1.1 vs. uniprot
Match: A0A3N9WND8_9ACTN (Uncharacterized protein n=9 Tax=Micromonospora TaxID=1873 RepID=A0A3N9WND8_9ACTN)

HSP 1 Score: 61.2 bits (147), Expect = 5.720e-8
Identity = 47/146 (32.19%), Postives = 63/146 (43.15%), Query Frame = 0
Query:   12 LPPVARDFIAASKDSVDREVAARRRRTRLTITGLTVALVAVASGAGFALVQRDRAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDTRDTAAAQLALRQATFNEPLRRTVRTPGDTALGSIAVSDAGEVVASSDGGDVLAW 157
            L  + RDF+  S+    R  AARRRRTR+ +TGL   +V V+  A  ALVQ +RAA +                              AL  R T  A++ LRQA  ++ L+  V      ALG     D   V A+   G+V  W
Sbjct:  463 LSDLERDFLETSRALEARHRAARRRRTRVAVTGLAATVVVVSVLAAVALVQANRAAAERDLAVARQLTVEAGNQLQIDPRQAQRLARRALTVRPTLDAEMVLRQAVVDDRLQAIVPMGSKKALGVAFSPDGRRVAATGADGEVRVW 608          
BLAST of mRNA_P-wetherbeei_contig57145.1.1 vs. uniprot
Match: A0A2V1NPH1_9ACTN (HTH cro/C1-type domain-containing protein n=3 Tax=Streptomyces TaxID=1883 RepID=A0A2V1NPH1_9ACTN)

HSP 1 Score: 57.8 bits (138), Expect = 9.100e-7
Identity = 48/141 (34.04%), Postives = 62/141 (43.97%), Query Frame = 0
Query:   18 DFIAASKDSVDREVAARRRRTRLTITGLTVALVAVASGAGFALVQRDRAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDTRDTAAAQLALRQATFNEPLRRTVRTPGDTALGSIAVSDAGEVVASSDG-GDVLAW 157
            +F+ AS+     E AA RRR RLT++GLT A+VA+A  AG A VQ  RA                                 A  TR T   + ALRQA F   +R  +   G   LG ++ S  G  +A+S G G V  W
Sbjct:  491 EFLTASRAHAQAERAAVRRRVRLTVSGLTAAVVALAVLAGVAFVQARRAEAGQALALSRQLVASARGQAQLDPELGLLLATRAYRTRATDETEAALRQAVFESRVRTVLTAHGGQVLG-VSFSPDGRYLATSGGDGTVRVW 630          
BLAST of mRNA_P-wetherbeei_contig57145.1.1 vs. uniprot
Match: UPI00194559D7 (hypothetical protein n=1 Tax=Actinoplanes couchii TaxID=403638 RepID=UPI00194559D7)

HSP 1 Score: 54.3 bits (129), Expect = 1.440e-5
Identity = 46/148 (31.08%), Postives = 67/148 (45.27%), Query Frame = 0
Query:   11 QLPPVARDFIAASKDSVDREVAARRRRTRLTITGLTVALVAVASGAGFALVQRDRAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDTRDTAAAQLALRQATFNEPLRRTVRTPGDTALGSIAVSDAGEVVASS-DGGDVLAW 157
            +L  + R+F+ A ++  D E AARRRR+R T+ GLT A+V  ++ A  A  Q  RA  Q                              A D R TA AQ  LRQA  +  +R T+      A+G +A    G+++ +S D G +  W
Sbjct:  459 RLNTLEREFLTAGRERRDAERAARRRRSRRTVAGLTAAVVLTSTLAVVAGAQALRAGEQRDLARSHQLVASARAQLDVDQEVALLLAAEAYDVRPTAEAQTMLRQAVADSRVRATLPAGHGQAIG-VAYDRNGKLICTSGDDGTIRIW 605          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57145.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A3N9WND8_9ACTN5.720e-832.19Uncharacterized protein n=9 Tax=Micromonospora Tax... [more]
A0A2V1NPH1_9ACTN9.100e-734.04HTH cro/C1-type domain-containing protein n=3 Tax=... [more]
UPI00194559D71.440e-531.08hypothetical protein n=1 Tax=Actinoplanes couchii ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57145contigP-wetherbeei_contig57145:38..508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57145.1.1mRNA_P-wetherbeei_contig57145.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57145 38..508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57145.1.1 ID=prot_P-wetherbeei_contig57145.1.1|Name=mRNA_P-wetherbeei_contig57145.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp
LAASEAGLGDQLPPVARDFIAASKDSVDREVAARRRRTRLTITGLTVALV
AVASGAGFALVQRDRAAGQRDIARSQGLAAQAEEVVGQAPETAVQLAEQA
LDTRDTAAAQLALRQATFNEPLRRTVRTPGDTALGSIAVSDAGEVVASSD
GGDVLAW
back to top