prot_P-wetherbeei_contig56583.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56583.1.1
Unique Nameprot_P-wetherbeei_contig56583.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length64
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig56583.1.1 vs. uniprot
Match: A0A5P6P6C0_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium betae TaxID=244734 RepID=A0A5P6P6C0_9BRAD)

HSP 1 Score: 60.8 bits (146), Expect = 1.310e-10
Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:   12 RCHTPRMRGIQYAAASRPITGVSGILDRPLQCAIAHKADDDTEFIDA 58
            RCH+PR RGIQYAAASR      G+LDRP  CAIAH A DDTE + A
Sbjct:   19 RCHSPRRRGIQYAAASRFNHRRHGVLDRPPLCAIAHWAGDDTECVAA 65
[Close]
BLAST of mRNA_P-wetherbeei_contig56583.1.1 vs. uniprot
Match: A0A7S7TJ40_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. CCBAU 51753 TaxID=1325100 RepID=A0A7S7TJ40_9BRAD)

HSP 1 Score: 55.5 bits (132), Expect = 8.890e-9
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:   12 RCHTPRMRGIQYAAASRPITGVSGILDRPLQCAIAHKADDDTEFI 56
            RCH+PR RGIQYAAASR IT  SGILDRP++      + DD+E++
Sbjct:    7 RCHSPRKRGIQYAAASRSITIASGILDRPIE------SGDDSEYV 45
[Close]
BLAST of mRNA_P-wetherbeei_contig56583.1.1 vs. uniprot
Match: A0A7S7Q3Q6_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. CCBAU 51765 TaxID=1325102 RepID=A0A7S7Q3Q6_9BRAD)

HSP 1 Score: 47.4 bits (111), Expect = 1.270e-5
Identity = 22/29 (75.86%), Postives = 23/29 (79.31%), Query Frame = 0 
Query:   12 RCHTPRMRGIQYAAASRPITGVSGILDRP 40
            RCH PR RGIQYAAASR    +SGILDRP
Sbjct:   16 RCHAPRKRGIQYAAASRGYVTLSGILDRP 44
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56583.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5P6P6C0_9BRAD1.310e-1065.96Uncharacterized protein n=1 Tax=Bradyrhizobium bet... [more]
A0A7S7TJ40_9BRAD8.890e-960.00Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
A0A7S7Q3Q6_9BRAD1.270e-575.86Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56583contigP-wetherbeei_contig56583:23..214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56583.1.1mRNA_P-wetherbeei_contig56583.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56583 23..214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56583.1.1 ID=prot_P-wetherbeei_contig56583.1.1|Name=mRNA_P-wetherbeei_contig56583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp
RRDEAGHHRHGRCHTPRMRGIQYAAASRPITGVSGILDRPLQCAIAHKAD
DDTEFIDAPRSPP*
back to top