prot_P-wetherbeei_contig54384.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig54384.1.1
Unique Nameprot_P-wetherbeei_contig54384.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length127
Homology
BLAST of mRNA_P-wetherbeei_contig54384.1.1 vs. uniprot
Match: A0A440H7P8_9HYPH (Type IV secretion system protein VirD4 n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A440H7P8_9HYPH)

HSP 1 Score: 54.3 bits (129), Expect = 5.520e-6
Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 0
Query:   21 KLVLSLWWTFTKAVPGAWGWI----RGQEKESPTHGNAGFASMKQLAADGHATPGGFLYGIQDK-KRVFGKLEACTHFFGKRGEGKSQTMGANLSYMTTLPTKPDILI 123
            K VL+   T  + + G+W ++    + ++K+ PTHGNA FAS K L   G+  P GFL  +  K +RVF + E         G GKSQ     +S +  L  +PD L+
Sbjct:    8 KAVLN---TPVRCIWGSWNFLAAVKKWRDKDKPTHGNASFASDKDLKKSGYFRPRGFLMCVTGKGQRVFTRDERSVLVMAPPGAGKSQHF---ISDLRVLMERPDALL 109          
BLAST of mRNA_P-wetherbeei_contig54384.1.1 vs. uniprot
Match: UPI001CD0580F (type IV secretory system conjugative DNA transfer family protein n=1 Tax=Mesorhizobium sp. BR-1-1-10 TaxID=2876660 RepID=UPI001CD0580F)

HSP 1 Score: 53.5 bits (127), Expect = 1.030e-5
Identity = 40/132 (30.30%), Postives = 65/132 (49.24%), Query Frame = 0
Query:    1 MRSVLKGIWLPFEWAFFAAGKLVLSLWWTFTKAVPGAWGWI----RGQEKESPTHGNAGFASMKQLAADGHATPGGFLYGIQDK-KRVFGKLEACTHFFGKRGEGKSQTMGANLSYMTTLPTK--PDILIND 125
            ++S+ K +W    WA+    + + + +     ++ G+W       + ++K+ PTHGNA FA+ K+L   G+  P GFL  +  K KRVF + E         G GKSQ   A+L  +   P    P ++I D
Sbjct:    7 IKSLFKVLW----WAWITILRCIEAAFNFTVWSIWGSWNAAAALRKWRDKDKPTHGNASFATDKELKKRGYFQPKGFLMCVTGKGKRVFTRDERSVLIMAPPGAGKSQHFIADLRVLLERPYAQLPFLMIGD 134          
BLAST of mRNA_P-wetherbeei_contig54384.1.1 vs. uniprot
Match: A0A4R9QA38_9HYPH (Type IV secretion system protein VirD4 n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A4R9QA38_9HYPH)

HSP 1 Score: 53.1 bits (126), Expect = 1.410e-5
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   44 QEKESPTHGNAGFASMKQLAADGHATPGGFLYGIQDK-KRVFGKLEACTHFFGKRGEGKSQTMGANLSYMTTLPTK--PDILIND 125
            ++ + PTHGNA FAS ++L   G+  P GFL G+  K KRVF + E         G GKSQ + A+L  + T   +  P ++I D
Sbjct:   54 RDADKPTHGNASFASDRELKKRGYLRPVGFLMGVTKKGKRVFTRDERSVLIMAPPGAGKSQHIIADLRMVLTRDKERLPFLVIGD 138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54384.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A440H7P8_9HYPH5.520e-635.19Type IV secretion system protein VirD4 n=1 Tax=Mes... [more]
UPI001CD0580F1.030e-530.30type IV secretory system conjugative DNA transfer ... [more]
A0A4R9QA38_9HYPH1.410e-538.82Type IV secretion system protein VirD4 n=2 Tax=Mes... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54384contigP-wetherbeei_contig54384:146..526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54384.1.1mRNA_P-wetherbeei_contig54384.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig54384 134..526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig54384.1.1 ID=prot_P-wetherbeei_contig54384.1.1|Name=mRNA_P-wetherbeei_contig54384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp
MRSVLKGIWLPFEWAFFAAGKLVLSLWWTFTKAVPGAWGWIRGQEKESPT
HGNAGFASMKQLAADGHATPGGFLYGIQDKKRVFGKLEACTHFFGKRGEG
KSQTMGANLSYMTTLPTKPDILINDPA
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