prot_P-wetherbeei_contig541.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig541.4.1
Unique Nameprot_P-wetherbeei_contig541.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length382
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig541.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 159..296
e-value: 6.5E-33
score: 116.4
coord: 1..84
e-value: 2.8E-17
score: 65.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 297..354
e-value: 2.3E-6
score: 29.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 185..243
e-value: 5.6E-10
score: 39.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 164..197
e-value: 1.1E-6
score: 26.4
coord: 200..232
e-value: 1.3E-4
score: 19.9
coord: 302..335
e-value: 5.9E-5
score: 21.0
coord: 12..44
e-value: 1.2E-6
score: 26.3
coord: 234..267
e-value: 3.8E-6
score: 24.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 302..331
e-value: 0.1
score: 12.9
coord: 12..41
e-value: 1.1E-5
score: 25.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 10.599635
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 162..196
score: 10.226951
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 10.446177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 11.476539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 10.522905
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..382
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 165..347
coord: 5..293
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig541contigP-wetherbeei_contig541:7525..9417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig541.4.1mRNA_P-wetherbeei_contig541.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig541 7525..9661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig541.4.1 ID=prot_P-wetherbeei_contig541.4.1|Name=mRNA_P-wetherbeei_contig541.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=382bp
MWFLGLRPNHTSYSCAISACARADRGDEALSLLREMPQLGLRPDRRCYAA
AMSALARLGRWEPCLQLLMEARAAAAGGSGVAGVTSGGGGASGIAGGSGG
KGGSVTIGRGSAATSPGGGGGGGVAGAVGGGGRGVAGAVGDGGSGGGSHS
GPVGAAAASEGMRVIHNAAIHACANAGNWRLSLELLDEMGRNGIRPDLTS
YNAALHGLARGGETARALTLLEAMRSGSVPPDRISYNCCITACSRSGDGD
GALRLVASMAADGIAPDPQTRHATMNALVAAGAWRRAVHLFEKAPPRERD
VFSYNIAAKALAQGGEVDRIVSLMDDMIAAGLEPDGATYGAALRACGVAV
TTAATATKATRAPEAPALEKSARSHGGKCQSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat