prot_P-wetherbeei_contig53465.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53465.1.1
Unique Nameprot_P-wetherbeei_contig53465.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length83
Homology
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: UPI001C3E0A3D (cytochrome c oxidase assembly protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3E0A3D)

HSP 1 Score: 114 bits (284), Expect = 1.010e-28
Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = 0
Query:    1 GHHGPSATASTDLWSLWAAPPVEVSALLILAAAYALRVRRVGGVPGLRQVSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            GH GPSA + TD+  LWA PPVE+SA+LI+ A YALRV RVGGV G R+ SF+ G+A+IL +V SPLGG+AQQGLL AHMLQH
Sbjct:   34 GHTGPSADSMTDISELWAVPPVEISAVLIVGALYALRVHRVGGVTGRRRASFYAGLAIILASVVSPLGGMAQQGLLAAHMLQH 116          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: UPI001C3DBEB4 (cytochrome c oxidase assembly protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3DBEB4)

HSP 1 Score: 108 bits (270), Expect = 1.090e-26
Identity = 52/72 (72.22%), Postives = 62/72 (86.11%), Query Frame = 0
Query:   12 DLWSLWAAPPVEVSALLILAAAYALRVRRVGGVPGLRQVSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            DL  LWA PPVEV+A+L+L A YA RV RVGG+ GLR+ SF+ G+A+IL+AVCSPLGGVAQQGL+TAHMLQH
Sbjct:   42 DLGELWAIPPVEVAAVLLLGALYAARVHRVGGISGLRRFSFYSGLALILVAVCSPLGGVAQQGLMTAHMLQH 113          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: UPI001C3C30B9 (cytochrome c oxidase assembly protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3C30B9)

HSP 1 Score: 95.5 bits (236), Expect = 1.030e-21
Identity = 49/82 (59.76%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    2 HHGPSATASTDLWSLWAAPPVEVSALLILAAAYALRVRRVGGVPGLRQVSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            H  P    STD   LWA PP+E SA+ + A  YAL VRR+GGV G R++SF  G+ +IL AV SPL G+AQQGLLTAHMLQH
Sbjct:   35 HLAPITGPSTDPGELWAVPPIETSAIAVAAVLYALAVRRLGGVSGRRRLSFAAGLLIILAAVVSPLTGMAQQGLLTAHMLQH 116          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: A0A7V9ZWC6_9ACTN (Cytochrome c oxidase assembly protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9ZWC6_9ACTN)

HSP 1 Score: 57.8 bits (138), Expect = 3.620e-8
Identity = 28/78 (35.90%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   10 STDLWSLWAAPPVEVSALLILAAAYALRVRRVG----GVPGLRQVSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            +  LW+ W   P++++ + ++A AY +R R +G     VPG R   F  GIA++++AV SP+  V ++ L   HM QH
Sbjct:    3 AVSLWTSWTLDPIQLTPIAVIAIAYGVRARTLGRRGQAVPGWRIGLFALGIALLVVAVASPIAAVGEEELFAFHMAQH 80          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: UPI00193DDD67 (cytochrome c oxidase assembly protein n=1 Tax=Microvirga sp. VF16 TaxID=2807101 RepID=UPI00193DDD67)

HSP 1 Score: 53.1 bits (126), Expect = 3.000e-6
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    3 HGPSATASTDLWSLWAAPPVEVSALLILAAAYAL---RVRRVGG--VPGLRQ---VSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            HG +     DLW  WAA P+    L++ +  +AL   R+RR  G  +PG      +SF  GIA+++IA+ SPL G+++  LL+AHM+QH
Sbjct:   36 HGTAPHGPGDLWHSWAADPLVTIPLIVSSVMFALGVWRLRRSLGRLLPGFGMPQILSFAAGIAMLVIALLSPLEGLSKP-LLSAHMVQH 123          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: A0A7V9DGD6_9ACTN (Cytochrome c oxidase assembly protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9DGD6_9ACTN)

HSP 1 Score: 52.4 bits (124), Expect = 5.260e-6
Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 0
Query:   12 DLWSLWAAPPVEVSALLILAAAYALRVR----RVGGVPGLRQVSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
             L + W   P++++ + +LA AYALR R    R   VP  R   F  GIA++L+A+ SP+  + +Q L + HMLQH
Sbjct:    5 SLLTSWTLDPLQLAPIALLALAYALRARTLHRRGTPVPRRRFALFGLGIALLLLALASPIAAIGEQELFSFHMLQH 80          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: A0A363U7C8_9CHLR (Uncharacterized protein n=2 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363U7C8_9CHLR)

HSP 1 Score: 50.1 bits (118), Expect = 3.330e-5
Identity = 27/67 (40.30%), Postives = 37/67 (55.22%), Query Frame = 0
Query:   17 WAAPPVEVSALLILAAAYALRVRRVGGVPGLRQVSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            W   P  +    +  A Y L V+R G    LRQV+FH G  + LIA+ SPL  +  + L +AHM+QH
Sbjct:    9 WTWYPSVIIGFSVWTALYILAVKRTGNTSVLRQVAFHTGTLIGLIALVSPLDELGDEYLFSAHMVQH 75          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: A0A7W1BPS1_9ACTN (Cytochrome c oxidase assembly protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1BPS1_9ACTN)

HSP 1 Score: 48.9 bits (115), Expect = 3.340e-5
Identity = 26/76 (34.21%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   12 DLWSLWAAPPVEVSALLILAAAYALRVRRVGG----VPGLRQVSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
             L + W   P++++ + ++A AY +R R +       PG R   F  GIA++++A+ SPL  VA++ L + HM QH
Sbjct:    5 SLLTSWTLDPLQLTPIALIAIAYGVRARTLARRGQPAPGWRIGLFALGIALLVVAIASPLAAVAEEELFSFHMAQH 80          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: A0A840IAD2_9ACTN (Cytochrome c oxidase assembly factor CtaG n=1 Tax=Conexibacter arvalis TaxID=912552 RepID=A0A840IAD2_9ACTN)

HSP 1 Score: 50.1 bits (118), Expect = 3.500e-5
Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 0
Query:   14 WSLWAAPPVEVSALLILAAAYALRVRRVGGV----PGLRQ-VSFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            W+ W   P   +ALL+ A AYA   RR   V    PG    + +  G+AV+ IA+ SPL  + +Q L++AHM+QH
Sbjct:    7 WTSWTFDPAMTAALLLAAWAYAHAYRRAARVAPRPPGPSHWIPYAAGLAVLAIALLSPLDPIGEQYLMSAHMVQH 81          
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Match: A0A538KRC9_9ACTN (Cytochrome c oxidase assembly protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538KRC9_9ACTN)

HSP 1 Score: 49.7 bits (117), Expect = 4.770e-5
Identity = 33/76 (43.42%), Postives = 42/76 (55.26%), Query Frame = 0
Query:   14 WSLWAAPPVEVSALLILAAAYALRVRRVGGVPGLRQVS------FHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH 83
            W  W+  P    ALL+ AA YA  +RRV  V G R V       +  G+AV+L+A+ SPL  +    LL AHMLQH
Sbjct:    7 WGSWSFDPFLWVALLVAAAWYASMLRRVRRVTG-RPVGPGHWLFYFSGLAVLLVALGSPLDPIGDDRLLLAHMLQH 81          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53465.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
UPI001C3E0A3D1.010e-2867.47cytochrome c oxidase assembly protein n=1 Tax=Milt... [more]
UPI001C3DBEB41.090e-2672.22cytochrome c oxidase assembly protein n=1 Tax=Milt... [more]
UPI001C3C30B91.030e-2159.76cytochrome c oxidase assembly protein n=1 Tax=Milt... [more]
A0A7V9ZWC6_9ACTN3.620e-835.90Cytochrome c oxidase assembly protein (Fragment) n... [more]
UPI00193DDD673.000e-640.45cytochrome c oxidase assembly protein n=1 Tax=Micr... [more]
A0A7V9DGD6_9ACTN5.260e-639.47Cytochrome c oxidase assembly protein n=1 Tax=Acti... [more]
A0A363U7C8_9CHLR3.330e-540.30Uncharacterized protein n=2 Tax=Anaerolineales bac... [more]
A0A7W1BPS1_9ACTN3.340e-534.21Cytochrome c oxidase assembly protein (Fragment) n... [more]
A0A840IAD2_9ACTN3.500e-540.00Cytochrome c oxidase assembly factor CtaG n=1 Tax=... [more]
A0A538KRC9_9ACTN4.770e-543.42Cytochrome c oxidase assembly protein n=1 Tax=Acti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019108Cytochrome c oxidase caa3-type, assembly factor CtaG-relatedPFAMPF09678Caa3_CtaGcoord: 34..83
e-value: 3.6E-9
score: 36.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53465contigP-wetherbeei_contig53465:290..538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53465.1.1mRNA_P-wetherbeei_contig53465.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53465 290..538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53465.1.1 ID=prot_P-wetherbeei_contig53465.1.1|Name=mRNA_P-wetherbeei_contig53465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp
GHHGPSATASTDLWSLWAAPPVEVSALLILAAAYALRVRRVGGVPGLRQV
SFHGGIAVILIAVCSPLGGVAQQGLLTAHMLQH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019108Caa3_assmbl_CtaG-rel