prot_P-wetherbeei_contig532.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig532.3.1
Unique Nameprot_P-wetherbeei_contig532.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length933
Homology
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: A0A4D9CS67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS67_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.300e-11
Identity = 44/148 (29.73%), Postives = 72/148 (48.65%), Query Frame = 0
Query:  244 VAWSRGDRGRFLAALRFHAPHVDSATAFAYFFPNRSESELLEFYYRWRYRQEDFDEWERARGCLDPASIIPDYYGEVCKICGGDGELVCCDTCPLPYHIGCLGLAAPPSEEPWCCPSCVARFQLPEDRAAAAAAVTEVVDRLEALRAK 391
            +AWS+ +   F+  +  +  +     A     P RS  +++  +Y W+ R  D+  W+  R        IPDY+ +VC +C   G+L+CCDTC L +H+ CLG       E + C  C A++    +R  A   V   V +++ LR K
Sbjct:  166 MAWSQEEEAVFVEGMNEYDKNFVQIKALL---PKRSVQDVVAHFYEWKQRA-DYRAWKADRPLQYLEHAIPDYHADVCDMCERPGDLLCCDTCNLAFHMKCLGFRDEDVPEDFSCSQCQAQYLTTSERERAKRWVESKVRKVQTLREK 309          
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: W7TMX5_9STRA (Nucleosome-remodeling factor subunit, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMX5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 7.840e-11
Identity = 44/148 (29.73%), Postives = 72/148 (48.65%), Query Frame = 0
Query:  244 VAWSRGDRGRFLAALRFHAPHVDSATAFAYFFPNRSESELLEFYYRWRYRQEDFDEWERARGCLDPASIIPDYYGEVCKICGGDGELVCCDTCPLPYHIGCLGLAAPPSEEPWCCPSCVARFQLPEDRAAAAAAVTEVVDRLEALRAK 391
            +AWS+ +   F+  +  +  +     A     P RS  +++  +Y W+ R  D+  W+  R        IPDY+ +VC +C   G+L+CCDTC L +H+ CLG       E + C  C A++    +R  A   V   V +++ LR K
Sbjct:  363 MAWSQEEEALFVEGMNEYDKNFVQIKALL---PKRSVQDVVAHFYEWKQRA-DYRAWKADRPLQYLEHAIPDYHADVCDMCERPGDLLCCDTCNLAFHMKCLGFRDEDVPEDFSCSQCQAQYLTTSERERAKRWVESKVRKVQTLREK 506          
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: M1VH65_CYAM1 (PHD-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VH65_CYAM1)

HSP 1 Score: 68.9 bits (167), Expect = 2.800e-8
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
Query:  301 ERARGCLDPAS---IIPDYYG----EVCKICGGDGELVCCDTCPLPYHIGCLGLAAPPSEEPWCCPSCVARFQLPE 369
            ER R C  P S   I    +G    +VC ICG  G++VCCD CP+ YH+ C+GL + PS E W CP+CV R ++ E
Sbjct:  153 ERYRRCRTPLSNHAIAAIAHGWAPDDVCSICGLGGDIVCCDECPMGYHLQCIGLPSIPSGE-WFCPACVLRIKVEE 227          
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: A0A7I4F0T5_PHYPA (PHD-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4F0T5_PHYPA)

HSP 1 Score: 66.2 bits (160), Expect = 2.020e-7
Identity = 30/60 (50.00%), Postives = 35/60 (58.33%), Query Frame = 0
Query:  307 LDPASIIPDYYGEVCKICGGDGELVCCDTCPLPYHIGC---LGLAAPPSEEPWCCPSCVA 363
            +D   I  D   E+C  CG DG+L CCD CP+  H+ C   LGL  P S E WCCP CVA
Sbjct:  489 VDYLDIGDDGQEEICHKCGLDGDLTCCDRCPISMHLKCIEVLGLRVPKSNEDWCCPICVA 548          
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: A0A7I4A9I9_PHYPA (PHD-type domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4A9I9_PHYPA)

HSP 1 Score: 66.2 bits (160), Expect = 2.650e-7
Identity = 30/60 (50.00%), Postives = 35/60 (58.33%), Query Frame = 0
Query:  307 LDPASIIPDYYGEVCKICGGDGELVCCDTCPLPYHIGC---LGLAAPPSEEPWCCPSCVA 363
            +D   I  D   E+C  CG DG+L CCD CP+  H+ C   LGL  P S E WCCP CVA
Sbjct:  489 VDYLDIGDDGQEEICHKCGLDGDLTCCDRCPISMHLKCIEVLGLRVPKSNEDWCCPICVA 548          
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: A0A7S1C3G3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3G3_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.850e-6
Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 0
Query:  276 PNRSESELLEFYYRWRYRQEDFDEWERARGCLDPASIIPDYYGEVCKICGGDGELVCCDTCPLPYHIGCLGLAAPP----SEEPWCCPSC 361
            P+R+  E +E++Y    +     +W+R  G     S+  +++ +VC +CG  G+L+CCD+C L +H+ CL    PP     EE W CP C
Sbjct:   89 PHRTARECVEYFYGVWKKLPRHSQWKRGLG----RSL--EFHDDVCAVCGSGGDLLCCDSCSLAFHVSCL---RPPLFDLPEEDWACPRC 169          
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: UPI001C4FE7BC (increased DNA methylation 1-like isoform X1 n=4 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FE7BC)

HSP 1 Score: 62.4 bits (150), Expect = 3.300e-6
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  315 DYYGEVCKICGGDGELVCCDTCPLPYHIGCLGLAAPPSEEPWCCPSCV 362
            D   ++C ICGGDG+L+CCD CPL YH  C+G+   P + P+ CP CV
Sbjct:  198 DKNDDICNICGGDGQLICCDVCPLTYHEECVGIKTLP-QAPFHCPICV 244          
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Match: A0A8J9S1U5_9CHLO (Probable ATP-dependent DNA helicase MPH1 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S1U5_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 5.650e-5
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0
Query:  308 DPASIIPDYYGEVCKICGGDGELVCCDTCPLPYHIGCLGLA-APPSEEPWCCPSC 361
            D +  +   + +VC +C GDGEL+CCD CP  +H+ CLGL+ APP +  W C  C
Sbjct: 1737 DASQHVQTQHEDVCGMCRGDGELLCCDGCPAAFHLACLGLSSAPPGD--WFCAVC 1789          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig532.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A4D9CS67_9STRA4.300e-1129.73Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TMX5_9STRA7.840e-1129.73Nucleosome-remodeling factor subunit, putative n=1... [more]
M1VH65_CYAM12.800e-846.05PHD-type domain-containing protein n=1 Tax=Cyanidi... [more]
A0A7I4F0T5_PHYPA2.020e-750.00PHD-type domain-containing protein n=1 Tax=Physcom... [more]
A0A7I4A9I9_PHYPA2.650e-750.00PHD-type domain-containing protein n=4 Tax=Physcom... [more]
A0A7S1C3G3_9STRA1.850e-634.44Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
UPI001C4FE7BC3.300e-652.08increased DNA methylation 1-like isoform X1 n=4 Ta... [more]
A0A8J9S1U5_9CHLO5.650e-545.45Probable ATP-dependent DNA helicase MPH1 at N-term... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 378..414
NoneNo IPR availableGENE3D1.10.246.220coord: 852..930
e-value: 1.2E-8
score: 36.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 684..698
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..554
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 911..933
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..737
NoneNo IPR availablePANTHERPTHR46267:SF15SINGLE MYB HISTONE 4coord: 852..900
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 852..902
e-value: 2.65032E-10
score: 54.4955
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 320..362
e-value: 6.6E-11
score: 52.2
IPR001005SANT/Myb domainSMARTSM00717santcoord: 587..645
e-value: 2.6
score: 14.5
coord: 452..513
e-value: 15.0
score: 7.4
coord: 848..903
e-value: 0.037
score: 23.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 844..901
score: 6.074693
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 590..642
e-value: 2.76038E-4
score: 37.555
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 314..409
e-value: 4.2E-13
score: 51.3
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 320..362
e-value: 1.3E-7
score: 31.3
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 318..364
score: 9.846001
IPR044597Single myb histone 1-6PANTHERPTHR46267SINGLE MYB HISTONE 4coord: 852..900
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 321..361
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 851..903
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 318..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig532contigP-wetherbeei_contig532:5026..9758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig532.3.1mRNA_P-wetherbeei_contig532.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig532 5026..9760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig532.3.1 ID=prot_P-wetherbeei_contig532.3.1|Name=mRNA_P-wetherbeei_contig532.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=933bp
NWLEAGAACKKMEGPCGRAYYTQLPVQQGVAAGNAHKEDMRVTTFAAHAL
PDMKPTPQGAINDSAMPFGGAGDAEVAMHSFPPGAAPSSEDDYARLRAAM
PNGAAATDAAAGAASPVNPATSGSGVDIGNARPSKNGSAINGAGGSSSGF
GVSGGGAYGYGCGYTYGQKPAAAGGSMAAGTIEQPMQQASSSGYSADGGG
NGLPLLSDVELCGIIHSACYDLVVADAQVQKCGLRPVMRIIPVVAWSRGD
RGRFLAALRFHAPHVDSATAFAYFFPNRSESELLEFYYRWRYRQEDFDEW
ERARGCLDPASIIPDYYGEVCKICGGDGELVCCDTCPLPYHIGCLGLAAP
PSEEPWCCPSCVARFQLPEDRAAAAAAVTEVVDRLEALRAKVAAEQEERA
TARVKRTVAEAEAAADAAAAAVEAKLHARRGRPSGRGKSGGYGGDTGGGR
ARTVRWAAAETQELIDAVRRHTGEARSGRVEWVDILTDPALSQLMKKRGN
RAVVEKWRNLRRQRRLPEDVFDAVCGLEDTGGGRSGGGTGGGSSGGACDR
GGVDGDEWLGGGSAGGGGQRGYKGRWDDLAGAGDYAGWHAWKTADDDALV
AAIRKFGDKNWRLLMEGAPSQRVADLFARWGPKAVKARWRHLRRESGRVR
WEVNSDDGEGEGEGGGFAARAAAVSAGPSSDEADGEFDPSEAGQDDSDYE
ADSGGGATTRTPSLEKRKAMHPPFQEQQPSWAAAPMAAPAAQGAAGAGIT
AEAWAAGAAAPSASWMGAAAPAGMPALSAAWAGAAMPARIPASPAAWMGA
AAPAALPALSAMPATDMRAEWGADGGGFGGAEALQSVSATGAAERAAASA
TWLANQESALVRAVRQFGVGSWAEMLVDPSFEGAFAGRTALDLQDRWRIM
KHRLSRRLRQEGPMLQRRAAPAMMAPKQELKAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR001005SANT/Myb
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR044597SMH1-6
IPR019786Zinc_finger_PHD-type_CS
IPR009057Homeobox-like_sf
IPR011011Znf_FYVE_PHD