prot_P-wetherbeei_contig52481.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig52481.1.1
Unique Name	prot_P-wetherbeei_contig52481.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	134

Homology

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: D1J798_ECTSI (Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 RepID=D1J798_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 1.360e-91
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT
Sbjct:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: J9QUX6_9STRA (Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 RepID=J9QUX6_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.180e-85
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            M KVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRP++S+AF+SVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGV L   T SFGVT
Sbjct:    1 MSKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPTVSDAFASVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVLLGAVTASFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: CYB6_THAPS (Cytochrome b6 n=103 Tax=cellular organisms TaxID=131567 RepID=CYB6_THAPS)

HSP 1 Score: 257 bits (657), Expect = 1.680e-85
Identity = 122/134 (91.04%), Postives = 130/134 (97.01%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            MGKVYDWFEERLE+Q+IADDI+SKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPS+ +AF+SVEYIMT VNFGWLIRSIHRWSASMMV+ML+LHVFRVYLTGGFKKPRELTWVTGV LAV TVSFGVT
Sbjct:    1 MGKVYDWFEERLEVQAIADDISSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVVDAFASVEYIMTSVNFGWLIRSIHRWSASMMVMMLVLHVFRVYLTGGFKKPRELTWVTGVILAVVTVSFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: CYB6_GUITH (Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=CYB6_GUITH)

HSP 1 Score: 256 bits (654), Expect = 4.810e-85
Identity = 120/134 (89.55%), Postives = 130/134 (97.01%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI FTCF++QVATGFAMTFYYRP+++EAF+SVEYIMTEVN+GWL RS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGVTLAV TVSFGVT
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFIIQVATGFAMTFYYRPTVAEAFASVEYIMTEVNYGWLFRSMHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVTLAVVTVSFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: CYB6_GRATL (Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID=CYB6_GRATL)

HSP 1 Score: 254 bits (648), Expect = 3.940e-84
Identity = 122/134 (91.04%), Postives = 130/134 (97.01%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGIVFT FL+QVA+GFAMTFYYRP+++EAFSSVEYIMT+VNFGWLIRSIHRWSASMMVLMLILH+FRVYLTGGFKKPRELTWVTGV LAV TVSFGVT
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGIVFTSFLIQVASGFAMTFYYRPTVAEAFSSVEYIMTDVNFGWLIRSIHRWSASMMVLMLILHMFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: A0A0D3M5L9_9STRA (Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A0D3M5L9_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.600e-83
Identity = 118/134 (88.06%), Postives = 129/134 (96.27%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYCFGGI  TCFL+QVATGFAMTFYYRP++++AF+SVEY+MTE NFGWLIRSIHRWSASMMVLM+ILHVFRVYLTGGFK+PRELTWVTGV L+V TVSFGVT
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCFGGITLTCFLIQVATGFAMTFYYRPTVTDAFASVEYLMTEANFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKRPRELTWVTGVLLSVITVSFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: W0RYI6_PORPP (Cytochrome b6 n=17 Tax=Eukaryota TaxID=2759 RepID=W0RYI6_PORPP)

HSP 1 Score: 252 bits (644), Expect = 1.600e-83
Identity = 120/134 (89.55%), Postives = 129/134 (96.27%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            MGKVYDWF+ERLEIQ+IADDITSKYVPPHVNIFYCFGGIV TCF++QVA+GFAMTFYYRPS++EAFSSV YIMT+VNFGWLIRSIHRWSASMMVLM+ILH FRVYLTGGFK PRELTWVTGVTLAV TVSFGVT
Sbjct:    1 MGKVYDWFQERLEIQAIADDITSKYVPPHVNIFYCFGGIVLTCFIMQVASGFAMTFYYRPSVAEAFSSVSYIMTDVNFGWLIRSIHRWSASMMVLMMILHSFRVYLTGGFKTPRELTWVTGVTLAVLTVSFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: A0A220IKU8_TRITU (Cytochrome b6 (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A220IKU8_TRITU)

HSP 1 Score: 251 bits (640), Expect = 3.220e-83
Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            M KVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI  TCFLVQVATGFAMTFYYRP+++EAFSSV+YIMTE NFGWLIRS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGV LAV T SFGVT
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: CYB6_CHLRE (Cytochrome b6 n=220 Tax=cellular organisms TaxID=131567 RepID=CYB6_CHLRE)

HSP 1 Score: 251 bits (642), Expect = 3.230e-83
Identity = 118/134 (88.06%), Postives = 129/134 (96.27%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            M KVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI FTCFLVQVATGFAMTFYYRP+++EAF+SV+YIMT+VNFGWLIRSIHRWSASMMVLM++LHVFRVYLTGGFK+PRELTWVTGV +AV TVSFGVT
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFLVQVATGFAMTFYYRPTVAEAFASVQYIMTDVNFGWLIRSIHRWSASMMVLMMVLHVFRVYLTGGFKRPRELTWVTGVIMAVCTVSFGVT 134

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BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Match: A0A7H0LY87_9LILI (Cytochrome b6 n=1 Tax=Martellidendron hornei TaxID=240464 RepID=A0A7H0LY87_9LILI)

HSP 1 Score: 251 bits (640), Expect = 6.510e-83
Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 0

Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT 134
            M KVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI  TCFLVQVATGFAMTFYYRP+++EAFSSV+YIMTE NFGWLIRS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGV LAV T SFGVT
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVT 134

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig52481.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1J798_ECTSI	1.360e-91	100.00	Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 R...	[more]
J9QUX6_9STRA	1.180e-85	92.54	Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 ...	[more]
CYB6_THAPS	1.680e-85	91.04	Cytochrome b6 n=103 Tax=cellular organisms TaxID=1...	[more]
CYB6_GUITH	4.810e-85	89.55	Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=...	[more]
CYB6_GRATL	3.940e-84	91.04	Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID...	[more]
A0A0D3M5L9_9STRA	1.600e-83	88.06	Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 Re...	[more]
W0RYI6_PORPP	1.600e-83	89.55	Cytochrome b6 n=17 Tax=Eukaryota TaxID=2759 RepID=...	[more]
A0A220IKU8_TRITU	3.220e-83	88.81	Cytochrome b6 (Fragment) n=2 Tax=cellular organism...	[more]
CYB6_CHLRE	3.230e-83	88.06	Cytochrome b6 n=220 Tax=cellular organisms TaxID=1...	[more]
A0A7H0LY87_9LILI	6.510e-83	88.81	Cytochrome b6 n=1 Tax=Martellidendron hornei TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 22..134 e-value: 7.9E-47 score: 159.5
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 4..134 score: 24.339441
IPR005797	Cytochrome b/b6, N-terminal	CDD	cd00284	Cytochrome_b_N	coord: 14..134 e-value: 2.22087E-51 score: 159.841
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10	Cytochrome Bc1 Complex; Chain C	coord: 1..134 e-value: 1.0E-56 score: 194.1
None	No IPR available	PIRSR	PIRSR038885-2	PIRSR038885-2	coord: 7..129 e-value: 6.9E-28 score: 95.1
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 15..134
IPR023530	Cytochrome b6, PetB	PANTHER	PTHR19271:SF20	SUBFAMILY NOT NAMED	coord: 15..134
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 5..132

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig52481	contig	P-wetherbeei_contig52481:1..402 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig52481.1.1	mRNA_P-wetherbeei_contig52481.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig52481 1..402 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig52481.1.1 ID=prot_P-wetherbeei_contig52481.1.1|Name=mRNA_P-wetherbeei_contig52481.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVAT
GFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILH
VFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005797	Cyt_b/b6_N
IPR027387	Cytb/b6-like_sf
IPR023530	Cyt_B6_PetB
IPR016174	Di-haem_cyt_TM