prot_P-wetherbeei_contig52022.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig52022.1.1
Unique Name	prot_P-wetherbeei_contig52022.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	182

Homology

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A3C2B0N0_9ACTN (Diaminopimelate decarboxylase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B0N0_9ACTN)

HSP 1 Score: 315 bits (807), Expect = 1.740e-104
Identity = 153/182 (84.07%), Postives = 169/182 (92.86%), Query Frame = 0

Query:    1 FHELDRLDALHDAGLPAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            FHE+DR++ALH  GLP P VLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARA++R+RRS +V LVG+HCHIGSNVF+A+NFAKA EVMASFAVP DLPE V+GGGLGV YVEGEEAP+ITQWGNVLLDACQ++GVRS V VEPGRSIVA+AAITVY VGT+KHIPGVRTYVSVDGGM
Sbjct:  135 FHEIDRIEALHREGLPTPRVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAIDRLRRSPAVELVGVHCHIGSNVFSAANFAKAVEVMASFAVPLDLPEFVMGGGLGVPYVEGEEAPTITQWGNVLLDACQAMGVRSRVCVEPGRSIVASAAITVYEVGTVKHIPGVRTYVSVDGGM 316

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A7X9KLH2_9ACTN (Diaminopimelate decarboxylase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KLH2_9ACTN)

HSP 1 Score: 313 bits (802), Expect = 9.640e-104
Identity = 157/182 (86.26%), Postives = 167/182 (91.76%), Query Frame = 0

Query:    1 FHELDRLDALHDAGLPAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDRLD+LH  GLPAP VLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDA +AV+RMRRS SV+L G+HCHIGSNVF A NFAKAAEVMA+FA+P DLPELVLGGGLGV YV+GEEAPSI QWGNVLLDACQ+LGVRS V VEPGRSIVA AAITVYTVGT+KHIPGVRTYVSVDGGM
Sbjct:  135 FDELDRLDSLHAEGLPAPKVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAHKAVDRMRRSLSVQLEGVHCHIGSNVFEAGNFAKAAEVMAAFAMPLDLPELVLGGGLGVPYVQGEEAPSIAQWGNVLLDACQALGVRSNVCVEPGRSIVAGAAITVYTVGTVKHIPGVRTYVSVDGGM 316

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A6I3F0B4_9ACTN (Diaminopimelate decarboxylase n=2 Tax=root TaxID=1 RepID=A0A6I3F0B4_9ACTN)

HSP 1 Score: 306 bits (783), Expect = 9.510e-101
Identity = 154/182 (84.62%), Postives = 164/182 (90.11%), Query Frame = 0

Query:    1 FHELDRLDALHDAGLPAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDRLDALH  GLP P+V+ RITPGVHAHTHEFIATGQDDSKFGFNLGNGDA RAV+RMRRS SV L G+HCHIGSNVF A++F +AAEVMA FA P DLPELVLGGGLGVAYV GEEAP+ITQWGNVLLDACQ+LGVRSAVSVEPGRSIVA AAIT+YTVGTIK IPGVR YVSVDGGM
Sbjct:  135 FDELDRLDALHAEGLPVPNVIPRITPGVHAHTHEFIATGQDDSKFGFNLGNGDAQRAVDRMRRSPSVHLEGVHCHIGSNVFDAASFGRAAEVMAKFAAPLDLPELVLGGGLGVAYVAGEEAPTITQWGNVLLDACQALGVRSAVSVEPGRSIVAQAAITLYTVGTIKDIPGVRRYVSVDGGM 316

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A848UHC2_9ACTN (Diaminopimelate decarboxylase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UHC2_9ACTN)

HSP 1 Score: 302 bits (773), Expect = 2.430e-99
Identity = 155/183 (84.70%), Postives = 165/183 (90.16%), Query Frame = 0

Query:    1 FHELDRLDALHDAGL-PAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDRLDALH  G+ P PDVL RITPGVHAHTHEFIATGQDDSKFGFNL NGDA RAV+R R +SSVRLVGLHCHIGSNVF AS+FAKAAEVMA+FAVP DLPELVLGGGLGVAYVE EEA SI+QWGNVLLDAC+SLGVRS VSVEPGR+I AAAAITVYT+GT+K IPGVRTY SVDGGM
Sbjct:  135 FDELDRLDALHAEGVGPVPDVLLRITPGVHAHTHEFIATGQDDSKFGFNLANGDATRAVDRARTASSVRLVGLHCHIGSNVFEASSFAKAAEVMANFAVPLDLPELVLGGGLGVAYVETEEAASISQWGNVLLDACESLGVRSRVSVEPGRAIAAAAAITVYTLGTVKEIPGVRTYFSVDGGM 317

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A6I3X0P2_9ACTN (Diaminopimelate decarboxylase n=2 Tax=root TaxID=1 RepID=A0A6I3X0P2_9ACTN)

HSP 1 Score: 301 bits (770), Expect = 6.910e-99
Identity = 148/182 (81.32%), Postives = 164/182 (90.11%), Query Frame = 0

Query:    1 FHELDRLDALHDAGLPAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F E+DR+DALH AG P P VL RITPGVHAHTHEFIATGQDDSKFGFNLGNGDA  AVER R SS+++LVGLHCHIGSNVFAA+NFAKAAEVMA FA  +DLPELVLGGGLGVAY  GEEAP+I QWG+VLLDAC +LGVR+ VSVEPGRSIVA+AA+T+YTVGT+KHIPGVRTY+SVDGGM
Sbjct:  136 FDEMDRIDALHAAGAPCPQVLLRITPGVHAHTHEFIATGQDDSKFGFNLGNGDALLAVERARGSSAMQLVGLHCHIGSNVFAAANFAKAAEVMAKFAASFDLPELVLGGGLGVAYTSGEEAPTIGQWGSVLLDACAALGVRARVSVEPGRSIVASAALTLYTVGTVKHIPGVRTYISVDGGM 317

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A6C7E865_ILUCY (Diaminopimelate decarboxylase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E865_ILUCY)

HSP 1 Score: 293 bits (749), Expect = 1.070e-95
Identity = 151/183 (82.51%), Postives = 162/183 (88.52%), Query Frame = 0

Query:    1 FHELDRLDALHDAGL-PAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDRLD L   G  P P V+ RITPGV AHTHEFIATGQDDSKFGFNLGNGDA +AV+R RRS+SV LVG+HCHIGSNVF AS+FAKAAEVMA+FAVP DLPELVLGGGLGVAYV GEEAP+ITQWGNVLLDAC +LGVRS VSVEPGRSI AAAA+T+YTVGTIK IPGVRTYVSVDGGM
Sbjct:  135 FDELDRLDMLAAEGCGPTPQVVLRITPGVSAHTHEFIATGQDDSKFGFNLGNGDAVKAVDRARRSTSVDLVGVHCHIGSNVFEASSFAKAAEVMANFAVPLDLPELVLGGGLGVAYVAGEEAPTITQWGNVLLDACDALGVRSRVSVEPGRSIAAAAAMTIYTVGTIKTIPGVRTYVSVDGGM 317

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A7Y1ZWV4_9ACTN (Diaminopimelate decarboxylase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZWV4_9ACTN)

HSP 1 Score: 291 bits (745), Expect = 4.040e-95
Identity = 146/182 (80.22%), Postives = 161/182 (88.46%), Query Frame = 0

Query:    1 FHELDRLDALHDAGLPAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDRLD LH      P+VL R+TPGV AHTHEFIATGQDDSKFGFNLGNGDA RAV+R RRS++V LVGLHCHIGSNVF AS+FAKAA VMA FAVP DLPELVLGGGLGV YVEGEEAP+ITQWGNVLLDAC +LGVRS VSVEPGR+IVA+AA+T+YTVGT+KHIP VRTY++VDGGM
Sbjct:  135 FDELDRLDELHAEFGSTPNVLLRVTPGVSAHTHEFIATGQDDSKFGFNLGNGDALRAVDRARRSAAVELVGLHCHIGSNVFDASSFAKAAAVMADFAVPLDLPELVLGGGLGVPYVEGEEAPTITQWGNVLLDACAALGVRSNVSVEPGRAIVASAAMTIYTVGTVKHIPDVRTYIAVDGGM 316

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A524N9R2_9ACTN (Diaminopimelate decarboxylase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524N9R2_9ACTN)

HSP 1 Score: 290 bits (742), Expect = 1.180e-94
Identity = 149/183 (81.42%), Postives = 161/183 (87.98%), Query Frame = 0

Query:    1 FHELDRLDALHDAGL-PAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDRLD L   G+ P P V+ RITPGVHAHTHEFIATGQDDSKFGFNL NGDA  AV+R RRS SV LVGLHCHIGSNVF A++FAKAAEVMA FAVP DLPEL+LGGGLGVAY+E EEAPSITQWG+VL DAC+SLGVRS VSVEPGR+IVAAAA+TVYTVGTIK IPGVRTYV+VDGGM
Sbjct:  135 FDELDRLDVLAATGVGPTPRVVLRITPGVHAHTHEFIATGQDDSKFGFNLANGDALLAVDRARRSDSVELVGLHCHIGSNVFDAASFAKAAEVMADFAVPLDLPELILGGGLGVAYLESEEAPSITQWGSVLRDACESLGVRSRVSVEPGRAIVAAAAMTVYTVGTIKEIPGVRTYVAVDGGM 317

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A6N2DQS2_9ACTN (Diaminopimelate decarboxylase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DQS2_9ACTN)

HSP 1 Score: 288 bits (738), Expect = 5.520e-94
Identity = 147/188 (78.19%), Postives = 163/188 (86.70%), Query Frame = 0

Query:    1 FHELDRLDALHDAGL------PAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDRLD LH  G+       AP+VL RITPGVHAHTHEFIATGQDDSKFGFNL NGDAARAV+R R SS+V LVGLHCHIGSNVF A++FA+AA+VMA FAVP DLP LVLGGGLGVAYV+GE AP+IT+WG VLLDAC+SLGVRS VSVEPGR+IVAAA +TVYTVGTIK IPGVRTY++VDGGM
Sbjct:  135 FDELDRLDVLHAEGMRSTGSGAAPEVLLRITPGVHAHTHEFIATGQDDSKFGFNLANGDAARAVQRARSSSAVELVGLHCHIGSNVFDAASFARAADVMAGFAVPLDLPHLVLGGGLGVAYVQGEVAPTITEWGEVLLDACRSLGVRSTVSVEPGRAIVAAAGMTVYTVGTIKQIPGVRTYLAVDGGM 322

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BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Match: A0A4R7HXK9_9ACTN (Diaminopimelate decarboxylase n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7HXK9_9ACTN)

HSP 1 Score: 288 bits (736), Expect = 9.820e-94
Identity = 149/184 (80.98%), Postives = 159/184 (86.41%), Query Frame = 0

Query:    1 FHELDRLDAL--HDAGLPAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLGNGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPYDLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGRSIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM 182
            F ELDR+DAL   + G P P VL RITPGV AHTHEFI+TGQDDSKFGFNL NGDA RAVER RRSSSV LVGLHCHIGSNVF AS+F KAAEVMA+FA P+DLPELVLGGGLGV YVEGEEAP++TQWGNVL DAC +LGVRS V VEPGRSIVA AAITVYT+GTIK IPGVRTY SVDGGM
Sbjct:  135 FDELDRIDALMAEEVG-PTPKVLLRITPGVEAHTHEFISTGQDDSKFGFNLANGDALRAVERARRSSSVELVGLHCHIGSNVFVASSFGKAAEVMANFAAPFDLPELVLGGGLGVPYVEGEEAPTLTQWGNVLRDACDALGVRSRVGVEPGRSIVAVAAITVYTLGTIKPIPGVRTYYSVDGGM 317

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig52022.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3C2B0N0_9ACTN	1.740e-104	84.07	Diaminopimelate decarboxylase n=1 Tax=Acidimicrobi...	[more]
A0A7X9KLH2_9ACTN	9.640e-104	86.26	Diaminopimelate decarboxylase n=2 Tax=Actinobacter...	[more]
A0A6I3F0B4_9ACTN	9.510e-101	84.62	Diaminopimelate decarboxylase n=2 Tax=root TaxID=1...	[more]
A0A848UHC2_9ACTN	2.430e-99	84.70	Diaminopimelate decarboxylase n=1 Tax=Ilumatobacte...	[more]
A0A6I3X0P2_9ACTN	6.910e-99	81.32	Diaminopimelate decarboxylase n=2 Tax=root TaxID=1...	[more]
A0A6C7E865_ILUCY	1.070e-95	82.51	Diaminopimelate decarboxylase n=1 Tax=Ilumatobacte...	[more]
A0A7Y1ZWV4_9ACTN	4.040e-95	80.22	Diaminopimelate decarboxylase n=1 Tax=Ilumatobacte...	[more]
A0A524N9R2_9ACTN	1.180e-94	81.42	Diaminopimelate decarboxylase n=1 Tax=Acidimicrobi...	[more]
A0A6N2DQS2_9ACTN	5.520e-94	78.19	Diaminopimelate decarboxylase n=1 Tax=Ilumatobacte...	[more]
A0A4R7HXK9_9ACTN	9.820e-94	80.98	Diaminopimelate decarboxylase n=2 Tax=Acidimicrobi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000183	Ornithine/DAP/Arg decarboxylase	PRINTS	PR01179	ODADCRBXLASE	coord: 66..79 score: 42.63 coord: 144..163 score: 36.17
IPR022644	Orn/DAP/Arg decarboxylase 2, N-terminal	PFAM	PF02784	Orn_Arg_deC_N	coord: 2..154 e-value: 2.7E-28 score: 99.0
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	GENE3D	2.40.37.10	Lyase, Ornithine Decarboxylase; Chain A, domain 1	coord: 152..182 e-value: 3.3E-45 score: 156.3
IPR029066	PLP-binding barrel	GENE3D	3.20.20.10	Alanine racemase	coord: 2..151 e-value: 3.3E-45 score: 156.3
IPR029066	PLP-binding barrel	SUPERFAMILY	51419	PLP-binding barrel	coord: 2..156
None	No IPR available	PANTHER	PTHR43727	DIAMINOPIMELATE DECARBOXYLASE	coord: 1..182
None	No IPR available	PANTHER	PTHR43727:SF2	DIAMINOPIMELATE DECARBOXYLASE 1, CHLOROPLASTIC-RELATED	coord: 1..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig52022	contig	P-wetherbeei_contig52022:2..547 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig52022.1.1	mRNA_P-wetherbeei_contig52022.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig52022 2..547 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig52022.1.1 ID=prot_P-wetherbeei_contig52022.1.1|Name=mRNA_P-wetherbeei_contig52022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp
FHELDRLDALHDAGLPAPDVLARITPGVHAHTHEFIATGQDDSKFGFNLG
NGDAARAVERMRRSSSVRLVGLHCHIGSNVFAASNFAKAAEVMASFAVPY
DLPELVLGGGLGVAYVEGEEAPSITQWGNVLLDACQSLGVRSAVSVEPGR
SIVAAAAITVYTVGTIKHIPGVRTYVSVDGGM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000183	Orn/DAP/Arg_de-COase
IPR022644	De-COase2_N
IPR009006	Ala_racemase/Decarboxylase_C
IPR029066	PLP-binding_barrel