prot_P-wetherbeei_contig5193.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5193.1.1
Unique Nameprot_P-wetherbeei_contig5193.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length390
Homology
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A1B6BZ14_9HEMI (RING-type E3 ubiquitin transferase n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6BZ14_9HEMI)

HSP 1 Score: 61.2 bits (147), Expect = 9.660e-7
Identity = 19/46 (41.30%), Postives = 33/46 (71.74%), Query Frame = 0
Query:  340 CVVCMDARRNAVIMPCSHLCVCSPCCDLLSNGLCPVCRQKYTSFIK 385
            CV+C+D++R+ +++PC H C+CSPC +   N  CP+CRQ +   ++
Sbjct:  292 CVICLDSKRDVILLPCRHFCMCSPCSEKFDNNNCPICRQIFNEKLQ 337          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A6B2LQ64_9EUKA (RING-type E3 ubiquitin transferase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LQ64_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 1.860e-6
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0
Query:  331 ERPVDDADICVVCMDARRNAVIMPCSHLCVCSPCCDLLSNG---LCPVCRQKYTSFIK 385
            E+  ++   CV+C+D +R  V++PC HLC+CS C    S     +CPVCR  +T+  K
Sbjct:   28 EQDQENKSYCVICLDEKREHVLVPCGHLCICSSCSGPFSKTQPHICPVCRAPFTATYK 85          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A7S2B8J1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B8J1_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 3.860e-6
Identity = 25/59 (42.37%), Postives = 32/59 (54.24%), Query Frame = 0
Query:  330 GERP---VDDADICVVCMDARRNAVIMPCSHLCVCSPCCDLLSNGLCPVCRQKYTSFIK 385
            GE P     D D CVVCMDA +  + +PC HLCVC  C    +   CP+CR   +  I+
Sbjct:   45 GEAPSATTPDGDTCVVCMDASKTHIYVPCGHLCVCESC-STTTGSRCPICRDSSSMVIR 102          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A7S4L522_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L522_GUITH)

HSP 1 Score: 59.3 bits (142), Expect = 4.470e-6
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0
Query:  329 SGERPVDDAD-ICVVCMDARRNAVIMPCSHLCVCSPCCDLLSNGLCPVCRQKYTSFIK 385
            S  +  DD + +C+VC  A R+AV +PC+H  +C  C   LS G CPVCRQ ++S ++
Sbjct:  299 SSNQDCDDWEQVCIVCCQAARDAVFLPCAHQVLCYRCSSALSRGSCPVCRQNFSSILR 356          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A7S2JNJ9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JNJ9_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 7.510e-6
Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 0
Query:  336 DAD-ICVVCMDARRNAVIMPCSHLCVCSPCCDLLSNGLCPVCRQKYTSFIKNIH 388
            DAD +CV+C+DA+R+ V +PC H C C  C    +NG CP+CRQ     IK IH
Sbjct:  114 DADSLCVICIDAKRSHVFIPCGHFCCCEGCIPK-ANGACPMCRQS----IKEIH 162          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: UPI001BB1EB47 (uncharacterized protein LOC121428732 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1EB47)

HSP 1 Score: 57.8 bits (138), Expect = 1.930e-5
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  340 CVVCMDARRNAVIMPCSHLCVCSPCCD-LLSNG-----LCPVCRQKYTSFIK 385
            CVVC+DA +N + MPC HLCVC PC D ++SN      +CP+CR +  S ++
Sbjct:  450 CVVCLDAVKNTLFMPCRHLCVCVPCADRIVSNDDIYMRICPLCRSRIGSIVE 501          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A7S2VTW6_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VTW6_9DINO)

HSP 1 Score: 54.7 bits (130), Expect = 2.340e-5
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0
Query:  340 CVVCMDARRNAVIMPCSHLCVCSPCCDLLSNGLCPVCRQKYTSFIK 385
            CVVC++A R  +++PC H+C C  C D L    CP+CR K T+F K
Sbjct:  115 CVVCLEAPREILLLPCRHVCCCRACADRLDT--CPICRAKKTAFAK 158          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A177B150_9BILA (RING-type E3 ubiquitin transferase n=1 Tax=Intoshia linei TaxID=1819745 RepID=A0A177B150_9BILA)

HSP 1 Score: 55.8 bits (133), Expect = 5.230e-5
Identity = 20/53 (37.74%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  335 DDADICVVCMDARRNAVIMPCSHLCVCSPCCDLL--SNGLCPVCRQKYTSFIK 385
            D +  CV+CM  +R+ +I+PC HLC+C  C + +   +  CP+CR+ +T+ I+
Sbjct:  262 DTSQECVICMTEKRDTIILPCRHLCLCEECAEAIRYQSITCPICREPFTTLIR 314          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A820CEY7_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A820CEY7_9BILA)

HSP 1 Score: 52.4 bits (124), Expect = 5.870e-5
Identity = 21/55 (38.18%), Postives = 34/55 (61.82%), Query Frame = 0
Query:  335 DDADICVVCMDARRNAVIMPCSHLCVCSPCCDLLSNGL----CPVCRQKYTSFIK 385
            +D ++CV+C + ++N V++PC HLCVC  C   L N      CP+CR +  S ++
Sbjct:   58 NDPNLCVICCNDKKNIVLLPCRHLCVCLTCSKKLWNNTSKQACPMCRNQIDSLLE 112          
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Match: A0A2R5G347_9STRA (DNA repair protein RAD16 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G347_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.700e-5
Identity = 21/50 (42.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:  336 DADICVVCMDARRNAVIMPCSHLCVCSPCCDLLSNGLCPVCRQKYTSFIK 385
            D D+CVVCMD +R+A+++PC H+ +C  C   L N +CP+CR   +   +
Sbjct: 1604 DEDLCVVCMDRQRDALLLPCGHIYLCMQCARGLDNRVCPMCRTSISRITR 1653          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5193.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A1B6BZ14_9HEMI9.660e-741.30RING-type E3 ubiquitin transferase n=1 Tax=Clastop... [more]
A0A6B2LQ64_9EUKA1.860e-639.66RING-type E3 ubiquitin transferase n=1 Tax=Arcella... [more]
A0A7S2B8J1_9EUKA3.860e-642.37Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S4L522_GUITH4.470e-643.10Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S2JNJ9_9EUKA7.510e-650.00Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
UPI001BB1EB471.930e-548.08uncharacterized protein LOC121428732 n=1 Tax=Lytec... [more]
A0A7S2VTW6_9DINO2.340e-547.83Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A177B150_9BILA5.230e-537.74RING-type E3 ubiquitin transferase n=1 Tax=Intoshi... [more]
A0A820CEY7_9BILA5.870e-538.18Hypothetical protein n=7 Tax=Rotaria TaxID=231623 ... [more]
A0A2R5G347_9STRA6.700e-542.00DNA repair protein RAD16 n=1 Tax=Hondaea fermental... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 276..310
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 338..382
e-value: 6.2E-12
score: 45.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..145
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 286..384
NoneNo IPR availablePANTHERPTHR14879:SF5OS06G0252500 PROTEINcoord: 286..384
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 336..383
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 223..289
e-value: 0.0018
score: 27.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 340..376
e-value: 0.0076
score: 25.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 340..377
score: 10.822189
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 327..387
e-value: 6.1E-14
score: 53.2
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 228..299
e-value: 7.5E-10
score: 40.4
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 225..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5193contigP-wetherbeei_contig5193:1629..2798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5193.1.1mRNA_P-wetherbeei_contig5193.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5193 1115..3000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5193.1.1 ID=prot_P-wetherbeei_contig5193.1.1|Name=mRNA_P-wetherbeei_contig5193.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=390bp
MIEMLHGRRPLPAPAAALLPPPATPPAPEPAYPAATTPPPLHYPYGYAEP
ELEKSSFEAITAGFGRGGGSSRIPFTAMGRLADGAGGGAFAQVPGLDGGT
FSLGPTISGGGSGAPSGITGAGATPGNTGAASTVSGNHGGSPGGGLFGSN
PFANIEGFDFLGGGGGSSSSGGGRFAKATAIFSASVPDTLATVGGGTFAG
IGCGGGNVAFAGSGNGGGGGGSGDAVVVDDLESFLTELGLSDYAAAFAEH
GWDLDGVMDADVESDFEEIGLLKGHQVRLRNGLESCRQQMQQAQAERREQ
EAAAAAAAAAAAGALAGAGGAGGAGGDRSGERPVDDADICVVCMDARRNA
VIMPCSHLCVCSPCCDLLSNGLCPVCRQKYTSFIKNIHS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR013761SAM/pointed_sf