prot_P-wetherbeei_contig51550.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51550.2.1
Unique Nameprot_P-wetherbeei_contig51550.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length174
Homology
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BLAST of mRNA_P-wetherbeei_contig51550.2.1 vs. uniprot
Match: A0A177Q0A1_9ACTN (Uncharacterized protein n=1 Tax=Actinobacteria bacterium SCGC AG-212-D09 TaxID=1799652 RepID=A0A177Q0A1_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 4.290e-5
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    3 SGITAGSAPRDIATAPDGTLWFTENALIGRLGRITTAGTVTEF 45
            SG++A SAP  IAT P G +WFTE A   R+GRIT+AGT++EF
Sbjct:   18 SGLSADSAPWGIATRPGGAMWFTERAA-NRIGRITSAGTISEF 59
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51550.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A177Q0A1_9ACTN4.290e-560.47Uncharacterized protein n=1 Tax=Actinobacteria bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..174
e-value: 1.6E-39
score: 137.3
NoneNo IPR availablePANTHERPTHR40274VIRGINIAMYCIN B LYASEcoord: 6..161
NoneNo IPR availableSUPERFAMILY63829Calcium-dependent phosphotriesterasecoord: 8..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51550contigP-wetherbeei_contig51550:29..550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51550.2.1mRNA_P-wetherbeei_contig51550.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51550 29..550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51550.2.1 ID=prot_P-wetherbeei_contig51550.2.1|Name=mRNA_P-wetherbeei_contig51550.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp
FSSGITAGSAPRDIATAPDGTLWFTENALIGRLGRITTAGTVTEFSSGLT
VGGGPWGIAAASDGNLWFTENALLGSIGRATTLGSVTQFTSGLTINGQLR
HIAEGPDGNLWSTWSANPGRIVRTTPSGTITQFTAGLSTNGAPSGIAAGP
DGNVWFTERANPARIGRITPAGVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf