prot_P-wetherbeei_contig51541.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51541.1.1
Unique Nameprot_P-wetherbeei_contig51541.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length184
Homology
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: UPI000D3EB259 (tripartite tricarboxylate transporter substrate-binding protein n=1 Tax=Polynucleobacter rarus TaxID=556055 RepID=UPI000D3EB259)

HSP 1 Score: 215 bits (547), Expect = 1.850e-66
Identity = 105/184 (57.07%), Postives = 136/184 (73.91%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAPAL 184
            ++PAVY+K+ Y  L+D KPLG+ICEVPLVMIAS +V A N  + +A  K    +VF ASSGNG+FSH+L+EM+N +AGIK+TH+PFKGE PAV H++S QD++IY+GTP   I NV AG+LK   VTTA+RM QLPN+ +  E GL DFNESFWYG+ A +  P  I EAY ++V D A   +L
Sbjct:   99 INPAVYEKLSYSPLKDLKPLGSICEVPLVMIASSKVPANNMPDFIAALKKDSQSVFGASSGNGSFSHMLIEMMNAKAGIKMTHIPFKGEGPAVAHVMSGQDSIIYVGTPATIIPNVQAGRLKAIGVTTAQRMSQLPNIPTFVEGGLTDFNESFWYGLAASSNTPPQILEAYYKAVNDAANTDSL 282          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: A0A1W1Y9R8_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Polynucleobacter sp. VK13 TaxID=1938817 RepID=A0A1W1Y9R8_9BURK)

HSP 1 Score: 210 bits (534), Expect = 1.700e-64
Identity = 100/184 (54.35%), Postives = 135/184 (73.37%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAPAL 184
            ++PAVY+K+ Y  LRD KPLG++CEVPLVMIAS +V A    EL+   K    +VF +S GNG+FSH+LLEM+NT+AG+K++H+PFKGEAP + H+LS QD+MIYI TP   I ++ +G+LK   VTTA+RM Q+PN+ +  E GL DFNESFWYG+ A A  P++I EAY ++V + A    L
Sbjct:   99 INPAVYEKISYSPLRDLKPLGSVCEVPLVMIASSKVPANTMGELITALKKDSKSVFGSSGGNGSFSHMLLEMVNTKAGVKMSHIPFKGEAPVIAHILSGQDSMIYISTPATIIPHIQSGRLKALGVTTAQRMPQIPNIPTFMEGGLPDFNESFWYGLAASANTPSHILEAYYKAVNETANTDTL 282          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: A0A0S9KU36_9BURK (LacI family transcriptional regulator n=2 Tax=Pseudorhodoferax TaxID=747294 RepID=A0A0S9KU36_9BURK)

HSP 1 Score: 154 bits (390), Expect = 7.970e-43
Identity = 75/182 (41.21%), Postives = 117/182 (64.29%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAP 182
            ++PA+Y K+P+D+ RDF P+G +  +P +++A  Q  AG  AEL+ALAKA+PGT+  A+ GNG+  HL  E++  R GI++TH+P++G  PAV  +L  Q  ++++  P  A A+V AGKLK  AV+T KR    P+V ++ E G+ DF    WY +  P+  P  +AE  +R + +I + P
Sbjct:  105 INPAIYAKIPFDTARDFDPVGTVASLPQILVAHPQFGAGTVAELLALAKAKPGTLSYATVGNGSPGHLAGELMKLRTGIQMTHIPYRGGGPAVTDVLGGQVPLLWVSIPAAA-AHVKAGKLKALAVSTRKRSAAFPDVPTMQEAGVADFEVDSWYAMFVPSKTPKAVAEKLNRLLNEIVQEP 285          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: A0A1H0U4D0_9RALS (Tripartite-type tricarboxylate transporter, receptor component TctC n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1H0U4D0_9RALS)

HSP 1 Score: 149 bits (375), Expect = 1.220e-40
Identity = 72/184 (39.13%), Postives = 115/184 (62.50%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAPAL 184
            ++P++Y K+PYD  +D  P+G I   PL ++A+      N  +++A AKA+PGTV   + GNG  +HL +E+L  +AG+K+ H+P+KG + A+  +LS Q   IYIG+ P  +  +  GKL+G AVT+ KR  QLPN  +++E G+  F    W+G++APA  PA I E  +  +  + + PA+
Sbjct:  100 INPSLYKKLPYDPAKDLTPIGLIASAPLAIVANNSSPYKNLTDVLAAAKAKPGTVTFGTPGNGTVAHLAMELLQKQAGVKMQHIPYKGASQALTDVLSGQ-VEIYIGSVPTVMGQIKMGKLRGIAVTSGKRSPQLPNTPTVAEAGVKQFEADTWFGLLAPAGTPAPIVERLNAELNRVLQVPAV 282          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: A0A257LGA2_9BURK (LacI family transcriptional regulator n=1 Tax=Burkholderiales bacterium PBB5 TaxID=2015567 RepID=A0A257LGA2_9BURK)

HSP 1 Score: 147 bits (371), Expect = 5.630e-40
Identity = 76/184 (41.30%), Postives = 115/184 (62.50%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAPAL 184
            ++P++Y K PYD+++DF P+  + EVPLV++ S  + AG   +++ALAKA+PG +  ASSGN A  HL  E     AG+++ HVP+KG  PA+  L+  Q  +++  + P ++  + AGKL+  AVTTA+R   LP V +++E GL  F+ S WYG+ APA  P  +       VA I R PA+
Sbjct:  107 INPSLYAKPPYDAIKDFAPVSLVAEVPLVLVVSPALGAGTVKDVIALAKAKPGALAFASSGNAAAPHLAGEAFKHAAGVEMLHVPYKGSGPALTDLMGGQVQLMF-DSMPSSMPFIQAGKLRSLAVTTARRSTALPQVPTMAEAGLPGFDISTWYGLWAPAGTPREVVARLGAEVAAIVRQPAV 289          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: A0A7C2UEG7_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UEG7_9PROT)

HSP 1 Score: 145 bits (367), Expect = 1.890e-39
Identity = 74/181 (40.88%), Postives = 115/181 (63.54%), Query Frame = 0
Query:    2 SPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAP 182
            +P++Y KV YD +RDF+P+  +   P V++    + A +  EL+ALAKARPG V  A SG+G+  HL  E+ NT A +K+ HVP++G  PA+  L+S + +++++ T   A+  VNAGKL+G AVT+  R+  LP + +++E GL D+  S WYG++APA  PA+I       V  + + P
Sbjct:  101 TPSLYSKVTYDPIRDFEPISLLSVAPNVLVVHPSLPAKSVRELIALAKARPGQVNFAGSGSGSTPHLAAELFNTLANVKMVHVPYRGTGPAIVGLMSGEASVMFMPTTN-AVPLVNAGKLRGLAVTSRTRLAALPGLPTVAESGLKDYESSQWYGMLAPAGTPADILNTLASHVMKVMQTP 280          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: A0A4Q3RBD2_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Comamonadaceae TaxID=80864 RepID=A0A4Q3RBD2_9BURK)

HSP 1 Score: 145 bits (366), Expect = 2.910e-39
Identity = 72/182 (39.56%), Postives = 111/182 (60.99%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAP 182
            ++P++Y K+P+D+ +DF+P+G +  +P +++A+ Q A    AELVALAKA+PGT+  AS GNG+  HL  E+L  R G ++THVP++G  PAV  ++  Q  M+++  P  A   V AGKLK  AV+T KR    P V ++ E G+ DF    WY +  PA  P    +  ++ +  + R P
Sbjct:  104 INPSIYPKLPFDTAKDFEPVGMVASLPQILVANTQFAPNTVAELVALAKAKPGTLSFASVGNGSPGHLAGELLKLRTGTQMTHVPYRGGGPAVTDVMGGQVQMLWVSIPAAA-QFVKAGKLKALAVSTLKRSAAFPEVPTMQEAGVADFEVDSWYAMFVPAKTPKTAIDKLNKVINTVVREP 284          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: UPI00188E3037 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Diaphorobacter sp. NR2-3-3-1 TaxID=2784387 RepID=UPI00188E3037)

HSP 1 Score: 144 bits (364), Expect = 5.900e-39
Identity = 70/182 (38.46%), Postives = 112/182 (61.54%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAP 182
            ++P++Y K+P+D+ +DF P+G +  +P +++A+ Q  A + +ELVA AKA+PG++  AS GNG+  HL  E+L  R G ++THVP++G  PAV  ++  Q  ++++  P  A   V +GKLK  AV+T KR    PNV ++ E G+ DF    WY + APA  P  I E  ++ +  +   P
Sbjct:  105 INPSIYSKLPFDTAKDFVPVGMVASLPQILVANPQFTANSVSELVAQAKAKPGSISFASVGNGSPGHLAGELLKLRTGTEMTHVPYRGGGPAVTDVMGGQVPLLWVSIPAAA-QFVKSGKLKALAVSTQKRSASFPNVPTMQEAGIADFEVDSWYAIFAPAKTPKPIIEKINKVINTVVHEP 285          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: UPI0010F4C7A3 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI0010F4C7A3)

HSP 1 Score: 144 bits (362), Expect = 1.250e-38
Identity = 68/175 (38.86%), Postives = 112/175 (64.00%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSV 175
            ++P++Y K+PYD ++ F P+  +  VP V++ +++  A N  E +A AKA+PG +  +S GNG+ +H+ +E L    G+ + H+P++G APA+  +L  Q   I+ G+P L IA++ +G+L+  AV++ KRM QLP+V +++E G   F    WYGVVAPA  PA I   Y+  +
Sbjct:  108 INPSIYPKLPYDPIKSFAPVALVARVPNVLVVNEKFPAKNFKEFIAQAKAQPGRLNYSSGGNGSAAHITMEFLKQETGVFMPHIPYRGAAPAISDVLGGQVETIFTGSPAL-IAHIRSGRLRALAVSSDKRMAQLPDVPTVAESGYPGFEADQWYGVVAPAGTPAAIVAFYNAEI 281          
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Match: A0A068YLK3_9BURK (Putative exported protein n=1 Tax=Polaromonas sp. CG9_12 TaxID=1504672 RepID=A0A068YLK3_9BURK)

HSP 1 Score: 143 bits (361), Expect = 1.570e-38
Identity = 69/182 (37.91%), Postives = 112/182 (61.54%), Query Frame = 0
Query:    1 LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKARPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQDAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFNESFWYGVVAPAALPANIAEAYDRSVADIARAP 182
            ++P++Y K+P+D+ +DF+P+G +  +P +++A+ Q  A   AEL+ LAKA+PGT+  AS GNG+  HL  E+L  R G ++TH+P++G  PAV  ++  Q  M+++  P  A   V +GKLK  AV+T KR    P+V ++ E G+ DF    WY +  PA  P  + +  +R +  + R P
Sbjct:  103 INPSIYPKLPFDTAKDFEPVGMVASLPQILVANMQFPANTVAELITLAKAKPGTLSFASVGNGSPGHLAGELLKLRTGTQMTHIPYRGGGPAVTDVMGGQVPMLWVSIPAAA-QFVKSGKLKALAVSTQKRSAAFPDVPTMQEAGVPDFEVDSWYAMFVPAKTPRPVIDKLNRVINTVMREP 283          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51541.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000D3EB2591.850e-6657.07tripartite tricarboxylate transporter substrate-bi... [more]
A0A1W1Y9R8_9BURK1.700e-6454.35Tripartite-type tricarboxylate transporter, recept... [more]
A0A0S9KU36_9BURK7.970e-4341.21LacI family transcriptional regulator n=2 Tax=Pseu... [more]
A0A1H0U4D0_9RALS1.220e-4039.13Tripartite-type tricarboxylate transporter, recept... [more]
A0A257LGA2_9BURK5.630e-4041.30LacI family transcriptional regulator n=1 Tax=Burk... [more]
A0A7C2UEG7_9PROT1.890e-3940.88Tripartite tricarboxylate transporter substrate bi... [more]
A0A4Q3RBD2_9BURK2.910e-3939.56Tripartite tricarboxylate transporter substrate bi... [more]
UPI00188E30375.900e-3938.46tripartite tricarboxylate transporter substrate bi... [more]
UPI0010F4C7A31.250e-3838.86tripartite tricarboxylate transporter substrate bi... [more]
A0A068YLK3_9BURK1.570e-3837.91Putative exported protein n=1 Tax=Polaromonas sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042100Bordetella uptake gene, domain 1GENE3D3.40.190.150Bordetella uptake gene, domain 1coord: 2..183
e-value: 7.1E-51
score: 175.0
IPR005064Bordetella uptake genePFAMPF03401TctCcoord: 3..183
e-value: 5.2E-40
score: 137.2
IPR005064Bordetella uptake genePANTHERPTHR42928TRICARBOXYLATE-BINDING PROTEINcoord: 2..183
NoneNo IPR availableGENE3D3.40.190.10coord: 27..151
e-value: 7.1E-51
score: 175.0
NoneNo IPR availablePANTHERPTHR42928:SF5BLR1237 PROTEINcoord: 2..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51541contigP-wetherbeei_contig51541:2..553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51541.1.1mRNA_P-wetherbeei_contig51541.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51541 2..553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51541.1.1 ID=prot_P-wetherbeei_contig51541.1.1|Name=mRNA_P-wetherbeei_contig51541.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp
LSPAVYDKVPYDSLRDFKPLGAICEVPLVMIASQQVAAGNAAELVALAKA
RPGTVFAASSGNGAFSHLLLEMLNTRAGIKLTHVPFKGEAPAVQHLLSNQ
DAMIYIGTPPLAIANVNAGKLKGFAVTTAKRMEQLPNVASLSEQGLGDFN
ESFWYGVVAPAALPANIAEAYDRSVADIARAPAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042100Bug_dom1
IPR005064BUG