prot_P-wetherbeei_contig51099.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51099.1.1
Unique Nameprot_P-wetherbeei_contig51099.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length146
Homology
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: A0A5C7NKF2_9PROT (Lrp/AsnC family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NKF2_9PROT)

HSP 1 Score: 168 bits (425), Expect = 5.240e-51
Identity = 90/129 (69.77%), Postives = 104/129 (80.62%), Query Frame = 0
Query:   19 RPLDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSG-VAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            RPLDD+DR+IL LLRQDARLPLKTLAA++GLARS+LR+RL+RLEADG+IRGYR DIA   SG V AYL  RL RTPALD I  LR +P VR C S+ GDIDL+++L A   E LNAVRD I+RH AVAD
Sbjct:    2 RPLDDRDRQILALLRQDARLPLKTLAARIGLARSTLRERLARLEADGVIRGYRIDIAPEASGTVGAYLLARLQRTPALDFIADLRKLPEVRDCASVAGDIDLIIQLQAETIERLNAVRDEIARHPAVAD 130          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: UPI00156362E9 (Lrp/AsnC family transcriptional regulator n=1 Tax=Aquabacterium terrae TaxID=2732868 RepID=UPI00156362E9)

HSP 1 Score: 131 bits (330), Expect = 1.280e-36
Identity = 70/128 (54.69%), Postives = 95/128 (74.22%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASV--SGVAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            +DDKDR++L LL QDAR PLKTLAA+VGLARSS+R+R+++LE  G+IRGYRA++  ++  + V A+L +RL RTP  D I  + A+ G R C S++GDIDL+VE+A     ELN  RD ++R D VAD
Sbjct:    1 MDDKDRQLLQLLLQDARTPLKTLAAEVGLARSSVRERIAKLEGAGVIRGYRAELGEALEPAAVRAFLLLRLQRTPLPDTIRRINALAGTRRCYSVSGDIDLVVEVAVTTMRELNDHRDAVARLDGVAD 128          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: A0A838BMF4_9HYPH (Lrp/AsnC family transcriptional regulator n=1 Tax=Microvirga mediterraneensis TaxID=2754695 RepID=A0A838BMF4_9HYPH)

HSP 1 Score: 131 bits (329), Expect = 1.930e-36
Identity = 69/129 (53.49%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSG---VAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            +DDK+R+IL LL+Q+ARLPLKTLA KVGLARSS+R+R++R+EA+G+I GY+AD+     G   V A L +RL RTPA + +  + A+P VR C S++GD+DL+VE+ AA    LNA RD I+    +AD
Sbjct:    1 MDDKNRQILQLLQQNARLPLKTLAGKVGLARSSVRERIARMEAEGVILGYKADVQPDSRGGEEVRALLMIRLGRTPARETVSRIAALPSVRRCFSVSGDLDLVVEIGAAAMSGLNAARDEIALMPDIAD 129          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: A0A7X5J9Q0_9HYPH (AsnC family transcriptional regulator n=3 Tax=Pannonibacter TaxID=227873 RepID=A0A7X5J9Q0_9HYPH)

HSP 1 Score: 130 bits (327), Expect = 3.990e-36
Identity = 70/128 (54.69%), Postives = 94/128 (73.44%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSGVA--AYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            LD+ +R++++LL+ DARLPLKTLAA+VGLARSS+R+R+ R+E  GIIRGY ADIA    G A  A+L VRL +TPA D +  +  +PGV +C SLTGD DL+V ++ A TE LN +RD I+    +AD
Sbjct:    3 LDEINRRLIELLKADARLPLKTLAAEVGLARSSVRERIDRMEKAGIIRGYHADIAPEAMGAALQAHLLVRLTKTPARDTVSRIIRLPGVTACASLTGDTDLIVSVSVADTEALNRLRDTIASLPHIAD 130          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: A0A6G6WWR5_9HYPH (Lrp/AsnC family transcriptional regulator n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WWR5_9HYPH)

HSP 1 Score: 129 bits (325), Expect = 7.120e-36
Identity = 68/125 (54.40%), Postives = 92/125 (73.60%), Query Frame = 0
Query:   22 DDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSGVAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            D+KDR+IL +LR+DAR+  K LAA+VGLARSSLRDR++RLE  GIIRGYRADIA + +   A L V+L +TP+  +I+ L  +P V+ C+SL G+IDLL+++AA     LN +RD IS    VA+
Sbjct:    4 DEKDREILTILREDARISAKALAARVGLARSSLRDRIARLEKSGIIRGYRADIADASNAAVACLLVKLKQTPSPQVIKRLERLPEVKRCLSLAGEIDLLIDIAAESLARLNQIRDEISHFPEVAE 128          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: UPI001378B40F (Lrp/AsnC family transcriptional regulator n=1 Tax=Microvirga arsenatis TaxID=2692265 RepID=UPI001378B40F)

HSP 1 Score: 129 bits (325), Expect = 7.790e-36
Identity = 70/129 (54.26%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSG---VAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            +D+K+ +IL LL+Q+ARLPLKTLA KVGLARSS+R+R++RLEA+GIIRGY+AD+         V A L +RL RTPA + +  + A+P VR C+S++GD+DL+VE+ AA    LNA RD I+    VAD
Sbjct:    1 MDEKNLQILRLLQQNARLPLKTLAGKVGLARSSVRERIARLEAEGIIRGYKADVRPDPQAGEAVRALLMIRLRRTPAREAVSRITALPAVRRCLSVSGDVDLVVEIEAAAMSALNAARDEIALMPDVAD 129          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: A0A370HAA5_9HYPH (AsnC family transcriptional regulator n=1 Tax=Microvirga subterranea TaxID=186651 RepID=A0A370HAA5_9HYPH)

HSP 1 Score: 127 bits (319), Expect = 6.320e-35
Identity = 69/129 (53.49%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSG---VAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            +D+K+ +IL LL+Q+ARLPLKTLA KVGLARSS+R+R++R+EADGII GY+AD+   + G   V A L +RL RTPA + +  + A+P VR C S++GD+DL+VE+ AA    LNA RD I+    +AD
Sbjct:    1 MDEKNHEILRLLQQNARLPLKTLAGKVGLARSSVRERIARMEADGIILGYKADVQPDLYGGEAVRALLMIRLKRTPAREAVCRITALPAVRRCFSVSGDLDLVVEIEAAAMSGLNAARDEIALLPDIAD 129          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: A0A3D9HY51_9PROT (AsnC family transcriptional regulator n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HY51_9PROT)

HSP 1 Score: 127 bits (319), Expect = 7.540e-35
Identity = 71/127 (55.91%), Postives = 92/127 (72.44%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIA-ASVSGVAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            LD+ DRKI+ +LR++ R P+K +A K G+ARS++R RL RLE  GII GY+A I   S S V A L  RL+ TPA DLIE L A+  VR C SL+G+IDL++E+ AA  E+LN+VRDRI+ H AVAD
Sbjct:    4 LDETDRKIIAILRENGREPVKGIATKTGIARSTVRHRLERLETSGIIAGYQAVIQDPSSSKVGAVLLARLHHTPAYDLIEDLSALTEVRRCYSLSGEIDLIIEIEAANAEQLNSVRDRIANHAAVAD 130          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: UPI001950D13B (Lrp/AsnC family transcriptional regulator n=1 Tax=Microvirga sp. BT689 TaxID=2778731 RepID=UPI001950D13B)

HSP 1 Score: 127 bits (318), Expect = 8.960e-35
Identity = 69/129 (53.49%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSG---VAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            +D+K+ +IL LL+Q+ARLPLKTLA KVGLARSS+R+R++R+EA+GII GYRAD+     G   V A L +RL RTPA + +  + A+P VR C+S++GD+DL+VE+ A     LNA RD I+    VAD
Sbjct:    1 MDEKNLQILHLLQQNARLPLKTLAGKVGLARSSVRERIARMEAEGIILGYRADVRQDHRGGEVVRALLMIRLGRTPARETVSRITALPAVRRCLSVSGDLDLVVEIEAGAMSGLNAARDEIALIPEVAD 129          
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Match: UPI00193A82E2 (Lrp/AsnC family transcriptional regulator n=2 Tax=Microvirga TaxID=186650 RepID=UPI00193A82E2)

HSP 1 Score: 124 bits (311), Expect = 1.740e-33
Identity = 68/129 (52.71%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   21 LDDKDRKILDLLRQDARLPLKTLAAKVGLARSSLRDRLSRLEADGIIRGYRADIAASVSG---VAAYLFVRLNRTPALDLIETLRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD 146
            +D+K+  IL LL+Q+ARLPLKTLA KVGLARSS+R+R++R+EA+GII GY+AD+ A   G   V A L +RL RTPA + +  + A+  VR C+S++GD+DL+VE+ AA    LNA RD I+    +AD
Sbjct:   19 MDEKNLHILRLLQQNARLPLKTLAGKVGLARSSVRERIARMEAEGIILGYKADVQADHQGGGAVRALLLIRLRRTPARETVSRITALLAVRRCLSVSGDLDLVVEIEAAAMSGLNAARDEIALMPDIAD 147          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51099.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C7NKF2_9PROT5.240e-5169.77Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
UPI00156362E91.280e-3654.69Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
A0A838BMF4_9HYPH1.930e-3653.49Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
A0A7X5J9Q0_9HYPH3.990e-3654.69AsnC family transcriptional regulator n=3 Tax=Pann... [more]
A0A6G6WWR5_9HYPH7.120e-3654.40Lrp/AsnC family transcriptional regulator n=2 Tax=... [more]
UPI001378B40F7.790e-3654.26Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
A0A370HAA5_9HYPH6.320e-3553.49AsnC family transcriptional regulator n=1 Tax=Micr... [more]
A0A3D9HY51_9PROT7.540e-3555.91AsnC family transcriptional regulator n=1 Tax=Aest... [more]
UPI001950D13B8.960e-3553.49Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
UPI00193A82E21.740e-3352.71Lrp/AsnC family transcriptional regulator n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000485AsnC-type HTH domainPRINTSPR00033HTHASNCcoord: 21..37
score: 48.37
coord: 48..67
score: 36.11
coord: 37..48
score: 34.72
IPR000485AsnC-type HTH domainPROSITEPS50956HTH_ASNC_2coord: 21..82
score: 32.16856
IPR019888Transcription regulator AsnC-likeSMARTSM00344asnccoord: 21..125
e-value: 2.8E-25
score: 100.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 13..73
e-value: 6.5E-18
score: 66.0
NoneNo IPR availablePFAMPF13412HTH_24coord: 21..68
e-value: 8.0E-14
score: 50.9
NoneNo IPR availableGENE3D3.30.70.920coord: 74..146
e-value: 2.2E-10
score: 42.4
NoneNo IPR availablePANTHERPTHR30154LEUCINE-RESPONSIVE REGULATORY PROTEINcoord: 21..144
NoneNo IPR availablePANTHERPTHR30154:SF53HTH-TYPE TRANSCRIPTIONAL REGULATOR LRPBcoord: 21..144
IPR019887Transcription regulator AsnC/Lrp, ligand binding domainPFAMPF01037AsnC_trans_regcoord: 88..145
e-value: 1.1E-8
score: 34.9
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 21..77
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 80..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51099contigP-wetherbeei_contig51099:119..556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51099.1.1mRNA_P-wetherbeei_contig51099.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51099 119..556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51099.1.1 ID=prot_P-wetherbeei_contig51099.1.1|Name=mRNA_P-wetherbeei_contig51099.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp
PNATALLRARTATLTSQPRPLDDKDRKILDLLRQDARLPLKTLAAKVGLA
RSSLRDRLSRLEADGIIRGYRADIAASVSGVAAYLFVRLNRTPALDLIET
LRAVPGVRSCVSLTGDIDLLVELAAAGTEELNAVRDRISRHDAVAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000485AsnC-type_HTH_dom
IPR019888Tscrpt_reg_AsnC-like
IPR036388WH-like_DNA-bd_sf
IPR019887Tscrpt_reg_AsnC/Lrp_C
IPR036390WH_DNA-bd_sf
IPR011008Dimeric_a/b-barrel