prot_P-wetherbeei_contig51083.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51083.1.1
Unique Nameprot_P-wetherbeei_contig51083.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length59
Homology
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A1T4T4R9_9HYPH (DNA-binding protein H-NS n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4T4R9_9HYPH)

HSP 1 Score: 81.3 bits (199), Expect = 1.400e-18
Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 0
Query:   12 SALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            S L G+KVKPKYRNPAN+ ETW GRG +PRW+VAALK GKK++DFAI
Sbjct:   63 SKLAGRKVKPKYRNPANKSETWAGRGKQPRWLVAALKSGKKIQDFAI 109          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A512N6D3_9HYPH (HNS domain-containing protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A512N6D3_9HYPH)

HSP 1 Score: 80.9 bits (198), Expect = 1.530e-18
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    7 GGGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            G GR  ALKGKK+ P YRNP NR ETW GRG +PRW+ AALKGGKKLE FAI
Sbjct:   47 GAGRPHALKGKKLPPLYRNPKNRDETWAGRGNRPRWLTAALKGGKKLEAFAI 98          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A6A7M7S7_9PROT (H-NS histone family protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M7S7_9PROT)

HSP 1 Score: 81.6 bits (200), Expect = 5.020e-18
Identity = 39/53 (73.58%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    6 TGGGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            TG  R  ALKGKK+ P YRNP NR ETW GRG +PRW+VAALKGGKKLE FAI
Sbjct:  122 TGAARPHALKGKKLPPLYRNPKNRTETWAGRGNRPRWLVAALKGGKKLEAFAI 174          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A512N5L9_9HYPH (HNS domain-containing protein n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512N5L9_9HYPH)

HSP 1 Score: 78.6 bits (192), Expect = 1.460e-17
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
Query:   13 ALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            ALKGKK+ P YRNP NR ETW GRG +PRW+VAALKGGKKLE FAI
Sbjct:   59 ALKGKKLPPLYRNPKNRKETWAGRGNRPRWLVAALKGGKKLEAFAI 104          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A363TPV9_9BRAD (Regulator n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TPV9_9BRAD)

HSP 1 Score: 75.9 bits (185), Expect = 2.550e-16
Identity = 36/54 (66.67%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    5 STGGGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            S   GR   LKG KV PKYRNP N  ETW GRG +PRW+ AALKGGKKL DF I
Sbjct:   50 SAANGRVHPLKGAKVPPKYRNPDNPSETWAGRGAQPRWLTAALKGGKKLADFLI 103          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: UPI001C214955 (H-NS histone family protein n=2 Tax=Reyranella TaxID=445219 RepID=UPI001C214955)

HSP 1 Score: 74.7 bits (182), Expect = 5.630e-16
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    8 GGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGG-KKLEDFAI 58
            G R  A KG+K++PKYRNP N  E W GRG +PRW+VAALKGG KKLEDFA+
Sbjct:   56 GPRAGAGKGRKIEPKYRNPENADEVWAGRGNRPRWLVAALKGGRKKLEDFAV 107          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A2V9N4E4_9BACT (Regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9N4E4_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 1.870e-15
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    7 GGGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            G G+GS LKG+KV PKYR P    ETW GRG +PRW+VAA+K GKKLEDF I
Sbjct:   53 GRGQGSELKGRKVAPKYRGPG--AETWAGRGARPRWLVAAIKEGKKLEDFLI 102          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A0A0DMC6_9BURK (Histone family protein nucleoid-structuring protein H-NS n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A0A0DMC6_9BURK)

HSP 1 Score: 73.2 bits (178), Expect = 2.390e-15
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    3 GRSTGGGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            G+   G  GSA  G+KV PKYRN A  GETWTGRGL+P+W+ AA+  GKKLEDFAI
Sbjct:   59 GKPAAGAGGSASAGRKVAPKYRN-AQTGETWTGRGLQPKWVQAAIASGKKLEDFAI 113          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A3S0C997_9BURK (H-NS histone family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3S0C997_9BURK)

HSP 1 Score: 72.8 bits (177), Expect = 3.150e-15
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 MDGRSTGGGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            + G S  G R  A  G KV PKYRNPA  G+TW+GRGLKP+W+ AAL  GKKLEDFAI
Sbjct:   54 LGGVSGAGKRRGANAGAKVAPKYRNPAT-GDTWSGRGLKPKWVAAALDSGKKLEDFAI 110          
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Match: A0A521YUV2_9BURK (H-NS histone family protein n=1 Tax=Aquabacterium sp. TaxID=1872578 RepID=A0A521YUV2_9BURK)

HSP 1 Score: 72.8 bits (177), Expect = 3.310e-15
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0
Query:   12 SALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGGKKLEDFAI 58
            S+  G+KV PKYRNPA+ GETWTGRGL+P+W+ AAL  GKKLEDFAI
Sbjct:   67 SSQAGRKVPPKYRNPAS-GETWTGRGLQPKWVQAALASGKKLEDFAI 112          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51083.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1T4T4R9_9HYPH1.400e-1874.47DNA-binding protein H-NS n=1 Tax=Enhydrobacter aer... [more]
A0A512N6D3_9HYPH1.530e-1873.08HNS domain-containing protein n=3 Tax=Alphaproteob... [more]
A0A6A7M7S7_9PROT5.020e-1873.58H-NS histone family protein n=1 Tax=Rhodospirillal... [more]
A0A512N5L9_9HYPH1.460e-1778.26HNS domain-containing protein n=2 Tax=Reyranella s... [more]
A0A363TPV9_9BRAD2.550e-1666.67Regulator n=1 Tax=Bradyrhizobiaceae bacterium TaxI... [more]
UPI001C2149555.630e-1667.31H-NS histone family protein n=2 Tax=Reyranella Tax... [more]
A0A2V9N4E4_9BACT1.870e-1567.31Regulator n=1 Tax=Acidobacteria bacterium TaxID=19... [more]
A0A0A0DMC6_9BURK2.390e-1564.29Histone family protein nucleoid-structuring protei... [more]
A0A3S0C997_9BURK3.150e-1563.79H-NS histone family protein n=1 Tax=Burkholderiale... [more]
A0A521YUV2_9BURK3.310e-1572.34H-NS histone family protein n=1 Tax=Aquabacterium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027444Histone-like protein H-NS, C-terminal domainSMARTSM00528hnsneu2coord: 13..58
e-value: 3.5E-16
score: 69.7
IPR001801Histone-like protein H-NSPFAMPF00816Histone_HNScoord: 9..52
e-value: 4.4E-14
score: 53.1
IPR037150Histone-like protein H-NS, C-terminal domain superfamilyGENE3D4.10.430.10coord: 16..58
e-value: 8.7E-17
score: 62.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableSUPERFAMILY81273H-NS histone-like proteinscoord: 16..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51083contigP-wetherbeei_contig51083:11..187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51083.1.1mRNA_P-wetherbeei_contig51083.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51083 2..187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51083.1.1 ID=prot_P-wetherbeei_contig51083.1.1|Name=mRNA_P-wetherbeei_contig51083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp
MDGRSTGGGRGSALKGKKVKPKYRNPANRGETWTGRGLKPRWMVAALKGG
KKLEDFAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027444H-NS_C_dom
IPR001801Histone_HNS
IPR037150H-NS_C_dom_sf