prot_P-wetherbeei_contig50885.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig50885.1.1
Unique Nameprot_P-wetherbeei_contig50885.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length60
Homology
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A7X9KN92_9ACTN (Integration host factor n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KN92_9ACTN)

HSP 1 Score: 99.8 bits (247), Expect = 6.180e-26
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 ASTSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLGK 59
            AST +TVGKLKVVSLLESLPGVGKVKARKIIE+IGIADNRRVQGLG QQKQALLE LGK
Sbjct:   45 ASTDSTVGKLKVVSLLESLPGVGKVKARKIIEDIGIADNRRVQGLGTQQKQALLEQLGK 103          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A6J6GBK9_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6GBK9_9ZZZZ)

HSP 1 Score: 97.8 bits (242), Expect = 5.440e-25
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 ASTSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLGK 59
            AST  T+GKLKVVSLLESLPGVGKVKARKI++EIGIADNRRVQGLGQQQK ALLE LGK
Sbjct:   60 ASTDDTIGKLKVVSLLESLPGVGKVKARKIMDEIGIADNRRVQGLGQQQKSALLEQLGK 118          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A6I3C8A2_9ACTN (Integration host factor n=4 Tax=root TaxID=1 RepID=A0A6I3C8A2_9ACTN)

HSP 1 Score: 95.1 bits (235), Expect = 4.150e-24
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 ASTSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLGK 59
            AST+ TVGKLKVVS+LESLPGVGKVKARK++ EIGIADNRRVQGLG QQKQALL+ LGK
Sbjct:   45 ASTNNTVGKLKVVSMLESLPGVGKVKARKVMTEIGIADNRRVQGLGTQQKQALLDQLGK 103          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A539DW59_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DW59_9ACTN)

HSP 1 Score: 94.4 bits (233), Expect = 8.370e-24
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 ASTSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLGK 59
            AST +TVGKLKVVS+LESLPGVGKVKARKI+EEIGIADNRRVQGLG QQK +LL+ LGK
Sbjct:   45 ASTDSTVGKLKVVSMLESLPGVGKVKARKIMEEIGIADNRRVQGLGTQQKASLLDQLGK 103          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A7W0KYV6_9ACTN (Integration host factor n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KYV6_9ACTN)

HSP 1 Score: 87.0 bits (214), Expect = 6.350e-21
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    7 VGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLG 58
            VGKLKVVSLLESLPGVGKVKARK++E+IGIADNRRVQGLG QQ+QALL+  G
Sbjct:   51 VGKLKVVSLLESLPGVGKVKARKVMEDIGIADNRRVQGLGSQQRQALLDAFG 102          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: UPI000E34FB93 (integration host factor n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E34FB93)

HSP 1 Score: 87.0 bits (214), Expect = 6.350e-21
Identity = 45/57 (78.95%), Postives = 50/57 (87.72%), Query Frame = 0
Query:    2 STSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLG 58
            S  T +GKLKVVSLLESLPGVGKVKARK++E+IGIADNRRVQGLG QQ+ ALL  LG
Sbjct:   46 SDDTNIGKLKVVSLLESLPGVGKVKARKVMEDIGIADNRRVQGLGAQQRSALLSALG 102          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A7K1C5Y2_9ACTN (Integration host factor n=3 Tax=root TaxID=1 RepID=A0A7K1C5Y2_9ACTN)

HSP 1 Score: 85.9 bits (211), Expect = 1.870e-20
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 ASTSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLGK 59
            AS+   VGKLKVVS+LESLPG+GKVKARKI+EE+GIADNR++QGLG QQK+ LLE L K
Sbjct:   45 ASSDPNVGKLKVVSMLESLPGLGKVKARKIMEEVGIADNRKIQGLGAQQKKTLLEHLAK 103          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A7Y1ZVR1_9ACTN (Integration host factor n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZVR1_9ACTN)

HSP 1 Score: 85.5 bits (210), Expect = 2.580e-20
Identity = 43/52 (82.69%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    7 VGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLG 58
            VGKLKVVSL++SLPGVGKVKAR+++EEIGIADNRRVQGLG QQ++ALLE LG
Sbjct:   51 VGKLKVVSLMQSLPGVGKVKARRLMEEIGIADNRRVQGLGAQQRKALLETLG 102          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A6I3HUI2_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3HUI2_9ACTN)

HSP 1 Score: 84.3 bits (207), Expect = 2.660e-20
Identity = 42/58 (72.41%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    2 STSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLGK 59
            ST   VGKL+V+++LESLPG+GKVKARKI+EE+GIADNR++QGLG QQK+ALLE L K
Sbjct:    7 STDPNVGKLRVLAMLESLPGLGKVKARKIMEEVGIADNRKIQGLGNQQKKALLEHLAK 64          
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Match: A0A4R7HZ05_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7HZ05_9ACTN)

HSP 1 Score: 84.7 bits (208), Expect = 5.190e-20
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    7 VGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQKQALLELLG 58
            VGKLKVVS+LESLPGVGKVKAR+++EEIGIADNRRVQGLG QQ+ ALL+ LG
Sbjct:   51 VGKLKVVSMLESLPGVGKVKARRVMEEIGIADNRRVQGLGAQQRAALLQQLG 102          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig50885.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9KN92_9ACTN6.180e-2691.53Integration host factor n=2 Tax=Actinobacteria Tax... [more]
A0A6J6GBK9_9ZZZZ5.440e-2588.14Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A6I3C8A2_9ACTN4.150e-2484.75Integration host factor n=4 Tax=root TaxID=1 RepID... [more]
A0A539DW59_9ACTN8.370e-2484.75Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A7W0KYV6_9ACTN6.350e-2184.62Integration host factor n=1 Tax=Acidimicrobiia bac... [more]
UPI000E34FB936.350e-2178.95integration host factor n=1 Tax=Desertimonas flava... [more]
A0A7K1C5Y2_9ACTN1.870e-2074.58Integration host factor n=3 Tax=root TaxID=1 RepID... [more]
A0A7Y1ZVR1_9ACTN2.580e-2082.69Integration host factor n=1 Tax=Ilumatobacter sp. ... [more]
A0A6I3HUI2_9ACTN2.660e-2072.41Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A4R7HZ05_9ACTN5.190e-2082.69Uncharacterized protein n=3 Tax=Acidimicrobiales T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.50coord: 1..59
e-value: 1.9E-19
score: 71.6
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 13..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig50885contigP-wetherbeei_contig50885:3..182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig50885.1.1mRNA_P-wetherbeei_contig50885.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig50885 3..182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig50885.1.1 ID=prot_P-wetherbeei_contig50885.1.1|Name=mRNA_P-wetherbeei_contig50885.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp
ASTSTTVGKLKVVSLLESLPGVGKVKARKIIEEIGIADNRRVQGLGQQQK
QALLELLGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010979Ribosomal_S13-like_H2TH