prot_P-wetherbeei_contig50710.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig50710.1.1
Unique Nameprot_P-wetherbeei_contig50710.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length180
Homology
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BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A7C3D6B1_9GAMM (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C3D6B1_9GAMM)

HSP 1 Score: 227 bits (579), Expect = 1.170e-71
Identity = 110/148 (74.32%), Postives = 128/148 (86.49%), Query Frame = 0 
Query:   32 MSATTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPI 179
            MS T  +FQ+G  TVTLETG IARQATGAVL+ M DTVVL TVVG+R S   RDFFPLT DYQERTYAAGKIPGGFF+REGRP+EKETLT+RL+DRP+RPLFP G+ +E Q+IATV SL+P VDP++P+MIGASAAL +SG+PFMGPI
Sbjct:    1 MSLTKKTFQFGEHTVTLETGEIARQATGAVLINMADTVVLVTVVGARESVEGRDFFPLTCDYQERTYAAGKIPGGFFRREGRPSEKETLTARLMDRPLRPLFPKGFTNETQVIATVKSLNPDVDPEVPSMIGASAALAISGMPFMGPI 148
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BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A3M1DUN5_9GAMM (Polyribonucleotide nucleotidyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DUN5_9GAMM)

HSP 1 Score: 238 bits (606), Expect = 1.490e-71
Identity = 116/149 (77.85%), Postives = 133/149 (89.26%), Query Frame = 0 
Query:   32 MSATTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            M+A   +F+YG +   LETG IARQATGAV+V  GDTVVL TVVG+R++DP+RDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRP+RPLFP G+ +EVQ+IATVMSLDP VDPDIPA++GASAAL +SG+PF GPIG
Sbjct:    1 MTAIKRTFEYGGRPWALETGEIARQATGAVMVHAGDTVVLVTVVGARNADPNRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPLRPLFPKGFRNEVQVIATVMSLDPEVDPDIPALVGASAALAISGIPFNGPIG 149
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BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A0S7ZSD8_9GAMM (Polynucleotide phosphorylase/polyadenylase (Fragment) n=1 Tax=Gammaproteobacteria bacterium SG8_11 TaxID=1703402 RepID=A0A0S7ZSD8_9GAMM)

HSP 1 Score: 231 bits (588), Expect = 4.190e-71
Identity = 113/146 (77.40%), Postives = 129/146 (88.36%), Query Frame = 0 
Query:   35 TTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            T  + QYGS TVTLETG IARQA+G+VLV+MGDTVVL T V  + +D  RDFFPLTV+YQERTY+AGKIPGGFFKREGRPTEKETLTSRLIDRP+RPLFP G+ +EVQIIATV+SLDP +DPD+PAMIGASA+L VSG+PF GPIG
Sbjct:    8 TKTTVQYGSHTVTLETGEIARQASGSVLVSMGDTVVLVTAVAIKEADSGRDFFPLTVNYQERTYSAGKIPGGFFKREGRPTEKETLTSRLIDRPLRPLFPDGFTNEVQIIATVVSLDPEIDPDVPAMIGASASLAVSGVPFNGPIG 153
[Close]
BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A2N1WFN0_9GAMM (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-8 TaxID=2013804 RepID=A0A2N1WFN0_9GAMM)

HSP 1 Score: 221 bits (564), Expect = 4.370e-71
Identity = 111/143 (77.62%), Postives = 123/143 (86.01%), Query Frame = 0 
Query:   38 SFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            SFQYG  TVTLETG +ARQATGAVLVTMGDTVVL T V    + P + FFPLTV+YQE+ Y+AGKIPGGFFKREGRPTEKETLTSRLIDRP+RPLFP G+ +EVQ+IATVMSL+P VD DIPAMIGASAAL +SG PF GPIG
Sbjct:    8 SFQYGEHTVTLETGHLARQATGAVLVTMGDTVVLVTAVARPDAKPGQAFFPLTVNYQEKFYSAGKIPGGFFKREGRPTEKETLTSRLIDRPLRPLFPKGFMNEVQVIATVMSLNPEVDGDIPAMIGASAALALSGAPFQGPIG 150
[Close]
BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A7C1W5L9_9GAMM (Polyribonucleotide nucleotidyltransferase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7C1W5L9_9GAMM)

HSP 1 Score: 235 bits (599), Expect = 1.580e-70
Identity = 112/149 (75.17%), Postives = 134/149 (89.93%), Query Frame = 0 
Query:   32 MSATTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            MS+   +FQYG  +VTLETG IARQA GAV+V+MGDTVVL TVVG++ ++P +DFFPLTVDYQERTYAAG+IPG +FKREGRP+EKETLTSRLIDRP+RPLFP+G+N EVQ+IATVMSLDP +DPDIPA+IGASAAL +SG+PF GP+G
Sbjct:    1 MSSHKKTFQYGQHSVTLETGEIARQADGAVMVSMGDTVVLVTVVGAKEANPEKDFFPLTVDYQERTYAAGRIPGSYFKREGRPSEKETLTSRLIDRPLRPLFPNGFNHEVQVIATVMSLDPEIDPDIPALIGASAALAISGIPFNGPLG 149
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BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A523NPG2_9PROT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NPG2_9PROT)

HSP 1 Score: 234 bits (598), Expect = 2.250e-70
Identity = 116/149 (77.85%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:   32 MSATTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            M+ T +SFQYG  TV LETGRIA+QA+GAV+ TMGDTVVLAT VGSR+   +  FFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRP+RPLFP GY  +VQI+ TVMSLDP VDPDI A+I ASAAL +SGLPF GPIG
Sbjct:    1 MAPTNISFQYGEHTVNLETGRIAKQASGAVVATMGDTVVLATAVGSRTGSDNPYFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPVRPLFPKGYRKDVQIVCTVMSLDPAVDPDIVALIAASAALSISGLPFKGPIG 149
[Close]
BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A7V6CCH5_9GAMM (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V6CCH5_9GAMM)

HSP 1 Score: 234 bits (597), Expect = 2.290e-70
Identity = 115/143 (80.42%), Postives = 128/143 (89.51%), Query Frame = 0 
Query:   38 SFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            +FQYG Q VTLETG IARQA GAVLV+MGDTVVL T VG R +DP RDFFPLTV+YQERTYAAGKIPGGFFKREGRP+EKETLTSRLIDRPIRPLFP G+ +EVQIIATV+S+DP +DPDIPA+IG SAAL +SG+PF GPIG
Sbjct:   22 TFQYGDQQVTLETGAIARQADGAVLVSMGDTVVLVTAVGRREADPGRDFFPLTVNYQERTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPKGFKNEVQIIATVVSVDPEIDPDIPALIGTSAALALSGIPFNGPIG 164
[Close]
BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A369C5L0_9GAMM (Polyribonucleotide nucleotidyltransferase n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369C5L0_9GAMM)

HSP 1 Score: 234 bits (598), Expect = 2.290e-70
Identity = 114/149 (76.51%), Postives = 131/149 (87.92%), Query Frame = 0 
Query:   32 MSATTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            M+ TT  FQYG   VT+ETG IARQATGAV+V M DTVVL TVVG+R+  P RDFFPLTV+YQERTYAAGKIPGGFF+REGRPTEKETLTSRLIDRP+RPLFP G+ +EVQ++ATVMSL+P VDPDIP++IGASAAL +SGLPF GP+G
Sbjct:    1 MTPTTKRFQYGGHEVTIETGAIARQATGAVMVNMADTVVLVTVVGNRTPVPGRDFFPLTVNYQERTYAAGKIPGGFFRREGRPTEKETLTSRLIDRPLRPLFPKGFTNEVQVVATVMSLNPQVDPDIPSLIGASAALAISGLPFNGPVG 149
[Close]
BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A431HTW3_9GAMM (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A431HTW3_9GAMM)

HSP 1 Score: 223 bits (569), Expect = 5.300e-70
Identity = 109/149 (73.15%), Postives = 129/149 (86.58%), Query Frame = 0 
Query:   32 MSATTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            M++   SFQYG  TVTLETG IARQA GAV+V+M DTVVL T VG++ + P RDFFPLTVDYQERTYAAG+IPGGFF+REGRP+EKETLTSRLIDRP+RPLFP G+ +EVQIIATVMS +  +DPDIPA+IGASAA+ ++G+PF GPIG
Sbjct:    1 MASVKKSFQYGQHTVTLETGEIARQADGAVMVSMADTVVLVTAVGAKEAAPGRDFFPLTVDYQERTYAAGRIPGGFFRREGRPSEKETLTSRLIDRPLRPLFPEGFYNEVQIIATVMSANNDIDPDIPALIGASAAVALTGMPFGGPIG 149
[Close]
BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Match: A0A848VCX1_9GAMM (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A848VCX1_9GAMM)

HSP 1 Score: 226 bits (576), Expect = 5.750e-70
Identity = 110/149 (73.83%), Postives = 127/149 (85.23%), Query Frame = 0 
Query:   32 MSATTVSFQYGSQTVTLETGRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSLDPTVDPDIPAMIGASAALEVSGLPFMGPIG 180
            M A   +FQYG   VTLETG +ARQA GAV+VTM +T VL T VG +++DP RDFFPLTV+YQE+TYAAGKIPGGFFKREGRP+EKETL  RLIDRPIRPLFP G+ +EVQ+IATV+SL+P VDPDIPAMIGASAAL +SG+PF GPIG
Sbjct:    1 MKAIKKTFQYGDHQVTLETGGVARQADGAVMVTMAETAVLVTAVGRKAADPGRDFFPLTVNYQEKTYAAGKIPGGFFKREGRPSEKETLVCRLIDRPIRPLFPKGFKNEVQVIATVVSLNPEVDPDIPAMIGASAALAISGMPFAGPIG 149
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig50710.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3D6B1_9GAMM1.170e-7174.32Polyribonucleotide nucleotidyltransferase (Fragmen... [more]
A0A3M1DUN5_9GAMM1.490e-7177.85Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A0S7ZSD8_9GAMM4.190e-7177.40Polynucleotide phosphorylase/polyadenylase (Fragme... [more]
A0A2N1WFN0_9GAMM4.370e-7177.62Polyribonucleotide nucleotidyltransferase (Fragmen... [more]
A0A7C1W5L9_9GAMM1.580e-7075.17Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
A0A523NPG2_9PROT2.250e-7077.85Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A7V6CCH5_9GAMM2.290e-7080.42Polyribonucleotide nucleotidyltransferase (Fragmen... [more]
A0A369C5L0_9GAMM2.290e-7076.51Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A431HTW3_9GAMM5.300e-7073.15Polyribonucleotide nucleotidyltransferase (Fragmen... [more]
A0A848VCX1_9GAMM5.750e-7073.83Polyribonucleotide nucleotidyltransferase (Fragmen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 45..174
e-value: 1.4E-21
score: 77.4
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 28..180
e-value: 3.8E-60
score: 205.3
IPR012162Polyribonucleotide nucleotidyltransferasePANTHERPTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEcoord: 29..180
NoneNo IPR availablePANTHERPTHR11252:SF0POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALcoord: 29..180
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 32..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig50710contigP-wetherbeei_contig50710:6..545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig50710.1.1mRNA_P-wetherbeei_contig50710.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig50710 6..545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig50710.1.1 ID=prot_P-wetherbeei_contig50710.1.1|Name=mRNA_P-wetherbeei_contig50710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
FRVFASATALPVFEPLPRQRLFILYEQVNKFMSATTVSFQYGSQTVTLET
GRIARQATGAVLVTMGDTVVLATVVGSRSSDPSRDFFPLTVDYQERTYAA
GKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPSGYNSEVQIIATVMSL
DPTVDPDIPAMIGASAALEVSGLPFMGPIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf
IPR012162PNPase
IPR020568Ribosomal_S5_D2-typ_fold