prot_P-wetherbeei_contig50450.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig50450.1.1
Unique Nameprot_P-wetherbeei_contig50450.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length184
Homology
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: A0A7W1DK11_9ACTN (PAS domain S-box protein n=2 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A7W1DK11_9ACTN)

HSP 1 Score: 174 bits (442), Expect = 3.650e-47
Identity = 92/190 (48.42%), Postives = 125/190 (65.79%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIM-----HSSLDR--RILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWA 183
            LGY + EL   TFQ ITHPDDL+ADL   +R+L G++R YQ EKRY  K+G  VWALLSVS+V D +G P+ F++QIQ+I+ RK AE+AL  SE RFR+TF+ A +G+       SS D   R L VNR  CEM+GY+ +EL   +   + HPED +  +   ++L+    + ++ EKRY+R DG V WA
Sbjct:  428 LGYPEVELLGKTFQDITHPDDLDADLYHFDRILAGEMRAYQTEKRYMHKEGHVVWALLSVSMVHDEEGEPLYFVSQIQNISERKRAEEALKESEQRFRSTFEDAPIGVALVGLPSSSPDSATRYLRVNRALCEMLGYAEEELLSMTSSDVTHPEDLEESRARAERLVEAGGSKYTIEKRYVRSDGRVVWA 617          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: UPI00145D0837 (PAS domain S-box protein n=1 Tax=Aromatoleum evansii TaxID=59406 RepID=UPI00145D0837)

HSP 1 Score: 171 bits (433), Expect = 5.840e-46
Identity = 93/184 (50.54%), Postives = 117/184 (63.59%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN 184
            LGY   EL   +F+ +T  DDL ADL Q +R+L G+I  YQ+E R   K GR VW  LSV+LVR+P G P  FIA I+DI  RK AE A   SEARFRATF+ A+VGI   + D R L VN+R C +VGY+ DEL   S Q I HP+D  AD  L +++LAG +  +  EKRY+ + G V W N
Sbjct:  539 LGYPHDELLAASFEDVTDADDLAADLAQSQRLLAGEITGYQLENRCLHKSGRIVWVNLSVALVRNPTGKPAYFIAVIEDIDARKRAEQAAAESEARFRATFEQAAVGIALVAPDGRWLQVNQRLCGIVGYTHDELLACSFQDITHPDDLAADLGLVQRVLAGELATYQMEKRYLHRSGRVVWIN 722          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: A0A2E7B5Z3_9PROT (Histidine kinase n=1 Tax=Hyphomonas sp. TaxID=87 RepID=A0A2E7B5Z3_9PROT)

HSP 1 Score: 168 bits (426), Expect = 5.100e-45
Identity = 89/183 (48.63%), Postives = 112/183 (61.20%), Query Frame = 0
Query:    2 GYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN 184
            GYT  EL + TFQ ITHPDDL  DL  +E  + G    Y MEKRYFRKDG  VW  L+V   R   G+   FI+ I+DIT  K  +DAL  SE RFRA F++A+VG+   + D R L  NR+ CE++GYS +EL++   Q + HP+D      L K++ AG       EKRYI KDGSV WAN
Sbjct:  183 GYTADELMQLTFQDITHPDDLHIDLSLLEETIAGKRDSYSMEKRYFRKDGALVWVKLTVGCARSKSGDVDYFISVIEDITQEKQKDDALHRSEERFRAIFENAAVGMAQVAPDGRWLRANRKVCEILGYSEEELKECDFQSLTHPDDLQKGVDLMKEMFAGQRQSMHIEKRYIHKDGSVVWAN 365          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: A0A2E9R405_9DELT (Histidine kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9R405_9DELT)

HSP 1 Score: 161 bits (408), Expect = 4.970e-44
Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWA 183
            LGY + EL  TTFQH+T P+DL+ D+    + L G I  Y +EKRY RKDG+ +WALLSVSLVRD +G P  FI+ +QDI  RK  ++        FR+TF+ A+VGI H SLD   L  N++  + +GY + EL   + Q + +PED +  +   + +++G I Y SFEKRY RKDGS  WA
Sbjct:   50 LGYDEQELLSTTFQHLTFPEDLDKDMELAYQTLEGKIDRYSIEKRYIRKDGKVIWALLSVSLVRDANGEPDFFISIVQDIMLRKQTQEM-------FRSTFEQAAVGIAHVSLDGVFLRCNQKCFDFLGYQSHELIGRTFQELTYPEDVEKGRQALRDMVSGRIPYCSFEKRYFRKDGSFVWA 225          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: UPI0004247C9F (PAS domain S-box protein n=1 Tax=Thermithiobacillus tepidarius TaxID=929 RepID=UPI0004247C9F)

HSP 1 Score: 165 bits (418), Expect = 6.120e-44
Identity = 81/184 (44.02%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN 184
            LGY   EL + TF  +THPDDL  D+  +++++ G++++   EKRY RKDG  VW  L++S+ RD  G P+  IA ++DI+ RK  ED L  SEA FRATF+ A+ G+ H+      L VN++ C+ +GY+ +EL Q +   I HP+D + D    ++LL+G I  ++ EKRY+RKDG V WAN
Sbjct:  336 LGYRADELLQMTFMDVTHPDDLPEDIRLIDQLMAGEMQKLTREKRYLRKDGGVVWGSLTLSVARDAAGVPLYRIAVVEDISERKRVEDTLRESEALFRATFNQAAFGMAHADPQGNFLQVNQKLCDTLGYAVEELLQMTFMEITHPDDLEGDMIQMRRLLSGEIQSYTREKRYLRKDGGVVWAN 519          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: A0A059FL94_9PROT (Histidine kinase n=1 Tax=Hyphomonas jannaschiana VP2 TaxID=1280952 RepID=A0A059FL94_9PROT)

HSP 1 Score: 164 bits (414), Expect = 2.090e-43
Identity = 87/183 (47.54%), Postives = 111/183 (60.66%), Query Frame = 0
Query:    2 GYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN 184
            GY   EL + TFQ ITHPDDL  DL  +E  + G    Y MEKRYFRKDG  VW  L+V   R   G+   FI+ I+DIT  K  +DAL  SE RFRA F++A+VG+   + D R L  NR+ CE++GYS +EL+    Q + HPED      L +++L+G  N    EKRY  KDGSV WA+
Sbjct:  160 GYKADELMQLTFQDITHPDDLHIDLSLLEETIAGKRDSYSMEKRYFRKDGTLVWVKLTVGCARSKSGDVDYFISVIEDITQEKQKDDALHRSEERFRAIFENAAVGMAQVAPDGRWLRANRKVCEILGYSEEELKDCDFQSLTHPEDLQEGLDLMEEMLSGERNSMHIEKRYTHKDGSVVWAS 342          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: A0A7W0H360_9ACTN (PAS domain S-box protein n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0H360_9ACTN)

HSP 1 Score: 163 bits (412), Expect = 2.920e-43
Identity = 83/180 (46.11%), Postives = 118/180 (65.56%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSV 180
            +G    EL   TF+ ITHPDDLEADL  V +V+ G++R Y+MEKRY R DG + W LLSVSLVR+  G P+ F++QI+D+T R+  EDAL  +E RFR+ FD A +G+  ++LD R L VNR   E+ G+S ++L+  + + I HP+D   ++     +LAG   ++  EKRYI  +G V
Sbjct:  179 VGRDPEELLGLTFEDITHPDDLEADLELVRQVIAGELRSYRMEKRYVRADGEQRWVLLSVSLVRNETGEPLYFVSQIEDVTDRRRGEDALREAEDRFRSAFDEAPIGMAMNALDGRFLRVNRALSEITGHSREQLEATNFRSITHPDDLARNEKGMSDMLAGRAPHYRTEKRYIHANGHV 358          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: A0A059DVF7_9PROT (Histidine kinase n=4 Tax=unclassified Hyphomonas TaxID=2630699 RepID=A0A059DVF7_9PROT)

HSP 1 Score: 162 bits (411), Expect = 5.360e-43
Identity = 85/184 (46.20%), Postives = 114/184 (61.96%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN 184
            +GY   EL + TFQ ITHPDDL  DLG ++  + G    Y MEKRYF KDG  VWA L+V  VR+  G    FI+ I+DIT  K  +DAL  SE RFRATF++A++G+   + D   + VNR+ CE++GYS  EL Q + Q + +PED        +++ AG  +    EKRY+ KDGS+ WAN
Sbjct:  159 VGYKPHELMKLTFQDITHPDDLNIDLGLLQEAIDGKRDTYSMEKRYFHKDGSMVWAKLTVGCVRNEAGEVDYFISVIEDITSEKRKDDALHQSEERFRATFENAAIGMAQVAPDGTWIHVNRKVCEILGYSEAELMQCNFQSLTYPEDLPLGVSQMQEMFAGKRSSMQIEKRYVHKDGSIVWAN 342          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: J6UG82_9RHOB (Histidine kinase n=1 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J6UG82_9RHOB)

HSP 1 Score: 162 bits (410), Expect = 5.970e-43
Identity = 89/184 (48.37%), Postives = 121/184 (65.76%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN 184
            +GYT  EL   TF  ITHPDDL++DL QV R+  GD+  ++ EKRY R+DG  VW  L+VS  R   G     I  ++DIT RKAAE AL  SE ++RA F++A+VGI   S D   L+VN RFC++VGY+A+EL+  S Q I HP D   D   ++++L+GVI+ +  EKRY+RK+GS  W +
Sbjct:  319 VGYTAEELNGKTFMEITHPDDLDSDLVQVWRLRAGDVSAFRREKRYVRRDGSAVWVDLNVS--RLVAGGRSYNITVVEDITARKAAELALRDSEQQYRALFENAAVGIAQVSADGLFLSVNDRFCDIVGYTAEELRTTSFQDITHPADIKEDLAQKRRVLSGVISNYRMEKRYLRKNGSRVWVD 500          
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Match: UPI0013D12220 (PAS domain S-box protein n=1 Tax=Desulfopila sp. IMCC35008 TaxID=2653858 RepID=UPI0013D12220)

HSP 1 Score: 160 bits (406), Expect = 2.590e-42
Identity = 84/184 (45.65%), Postives = 110/184 (59.78%), Query Frame = 0
Query:    1 LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKDGREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRATFDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSDADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN 184
            LGY   E +  T+  +THPDDL A L + +R L G    Y + KR+ RKDG  +W  L    VR PDG    F+A + DI+  K AE AL  SEARFRATFD A+VGI H S + R L +N RFC++ GYS  E+ + + Q I + +D DAD     +LL G I  +S EKRY+RK G + W +
Sbjct:  974 LGYDRDEFRYLTWAELTHPDDLAASLVEFDRALAGQTDSYSLVKRFIRKDGTVIWVHLDAGCVRTPDGEVDYFVAVVVDISESKKAEQALRKSEARFRATFDQAAVGIAHISTEGRFLRLNDRFCDIAGYSRAEMLELTFQGITYSDDLDADVEQVNRLLNGEIKTYSMEKRYVRKTGELVWVD 1157          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig50450.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W1DK11_9ACTN3.650e-4748.42PAS domain S-box protein n=2 Tax=Rubrobacteraceae ... [more]
UPI00145D08375.840e-4650.54PAS domain S-box protein n=1 Tax=Aromatoleum evans... [more]
A0A2E7B5Z3_9PROT5.100e-4548.63Histidine kinase n=1 Tax=Hyphomonas sp. TaxID=87 R... [more]
A0A2E9R405_9DELT4.970e-4446.45Histidine kinase n=1 Tax=Deltaproteobacteria bacte... [more]
UPI0004247C9F6.120e-4444.02PAS domain S-box protein n=1 Tax=Thermithiobacillu... [more]
A0A059FL94_9PROT2.090e-4347.54Histidine kinase n=1 Tax=Hyphomonas jannaschiana V... [more]
A0A7W0H360_9ACTN2.920e-4346.11PAS domain S-box protein n=1 Tax=Thermoleophilacea... [more]
A0A059DVF7_9PROT5.360e-4346.20Histidine kinase n=4 Tax=unclassified Hyphomonas T... [more]
J6UG82_9RHOB5.970e-4348.37Histidine kinase n=1 Tax=Rhodovulum sp. PH10 TaxID... [more]
UPI0013D122202.590e-4245.65PAS domain S-box protein n=1 Tax=Desulfopila sp. I... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainSMARTSM00091pas_2coord: 95..161
e-value: 5.5E-10
score: 49.2
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 1..90
e-value: 7.4E-21
score: 72.6
coord: 92..183
e-value: 2.0E-20
score: 71.2
IPR000014PAS domainPROSITEPS50112PAScoord: 1..36
score: 9.105503
IPR000014PAS domainPROSITEPS50112PAScoord: 93..163
score: 11.970475
IPR000014PAS domainCDDcd00130PAScoord: 1..80
e-value: 1.14925E-9
score: 51.4799
IPR000014PAS domainCDDcd00130PAScoord: 104..183
e-value: 1.1374E-9
score: 51.4799
IPR001610PAC motifSMARTSM00086pac_2coord: 41..83
e-value: 1.5E-11
score: 54.3
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 91..184
e-value: 2.0E-22
score: 81.4
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 1..90
e-value: 3.8E-21
score: 77.3
NoneNo IPR availablePANTHERPTHR44757DIGUANYLATE CYCLASE DGCPcoord: 1..88
NoneNo IPR availablePANTHERPTHR44757:SF4DIGUANYLATE CYCLASE DGCE-RELATEDcoord: 1..88
NoneNo IPR availablePANTHERPTHR44757DIGUANYLATE CYCLASE DGCPcoord: 91..183
NoneNo IPR availablePANTHERPTHR44757:SF4DIGUANYLATE CYCLASE DGCE-RELATEDcoord: 91..183
IPR013655PAS fold-3PFAMPF08447PAS_3coord: 118..183
e-value: 6.6E-11
score: 42.3
coord: 1..75
e-value: 8.9E-13
score: 48.3
IPR000700PAS-associated, C-terminalPROSITEPS50113PACcoord: 40..92
score: 16.381548
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 1..86
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 80..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig50450contigP-wetherbeei_contig50450:9..560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig50450.1.1mRNA_P-wetherbeei_contig50450.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig50450 9..560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig50450.1.1 ID=prot_P-wetherbeei_contig50450.1.1|Name=mRNA_P-wetherbeei_contig50450.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp
LGYTDTELKETTFQHITHPDDLEADLGQVERVLRGDIREYQMEKRYFRKD
GREVWALLSVSLVRDPDGNPVQFIAQIQDITGRKAAEDALLASEARFRAT
FDHASVGIMHSSLDRRILTVNRRFCEMVGYSADELQQGSVQRIHHPEDSD
ADQPLEKQLLAGVINYFSFEKRYIRKDGSVFWAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR001610PAC
IPR013655PAS_fold_3
IPR000700PAS-assoc_C
IPR035965PAS-like_dom_sf