prot_P-wetherbeei_contig21323.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig21323.1.1
Unique Nameprot_P-wetherbeei_contig21323.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length78
Homology
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: S8CBZ7_9LAMI (PHD-type domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CBZ7_9LAMI)

HSP 1 Score: 76.3 bits (186), Expect = 1.920e-16
Identity = 26/48 (54.17%), Postives = 38/48 (79.17%), Query Frame = 0
Query:   17 CEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICIAT 64
            C+ CG+D D D+VLLCD C  E+H +CL+PPL+ +P+G+W CP C+A+
Sbjct:   46 CKVCGMDKDDDNVLLCDKCDSEYHRYCLNPPLQKIPDGNWYCPSCVAS 93          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A2J7ZHW2_9CHLO (Lysine-specific demethylase lid (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZHW2_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 5.460e-16
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   17 CEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICIATARKKGAAAAAAGAK 78
            CE+C      D +LLCD C R FH++CLDPPL AVPEGDWLCP C A   ++G   A  GA+
Sbjct:  108 CERCAGGQQEDQILLCDRCDRGFHLFCLDPPLAAVPEGDWLCPPCRAEEEREGGGGAGRGAR 169          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A9TBW6_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TBW6_PHYPA)

HSP 1 Score: 79.3 bits (194), Expect = 1.660e-15
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   12 EEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICIA 63
            E+ T+C  CG+D D D +LLCD C  E+H++CL PPLE VP+G+W CP C+A
Sbjct: 1935 EDDTTCRVCGVDEDYDSILLCDGCDAEYHIYCLVPPLEKVPKGNWFCPSCVA 1986          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A7I4C0B1_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C0B1_PHYPA)

HSP 1 Score: 79.3 bits (194), Expect = 1.660e-15
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   12 EEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICIA 63
            E+ T+C  CG+D D D +LLCD C  E+H++CL PPLE VP+G+W CP C+A
Sbjct: 1861 EDDTTCRVCGVDEDYDSILLCDGCDAEYHIYCLVPPLEKVPKGNWFCPSCVA 1912          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A2K1L4D6_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L4D6_PHYPA)

HSP 1 Score: 78.2 bits (191), Expect = 4.240e-15
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   12 EEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICIA 63
            E+ ++C  CG+D D D +LLCD C  E+H++CL PPLE VP+G+W CP C+A
Sbjct: 1865 EDDSTCRACGVDEDYDSILLCDGCDAEYHIYCLVPPLERVPKGNWFCPSCVA 1916          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A6J0P9G9_ELAGV (methyl-CpG-binding domain-containing protein 9 n=6 Tax=Arecaceae TaxID=4710 RepID=A0A6J0P9G9_ELAGV)

HSP 1 Score: 77.8 bits (190), Expect = 5.760e-15
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   12 EEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICI 62
            EEG  C+ CG+D D D VLLCD C  E+HM+CL+PPL  +PEG+W CP C+
Sbjct: 1291 EEGV-CKVCGIDKDDDSVLLCDKCDSEYHMYCLNPPLARIPEGNWYCPSCV 1340          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A199UZ30_ANACO (Methyl-CpG-binding domain-containing protein 9 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199UZ30_ANACO)

HSP 1 Score: 77.0 bits (188), Expect = 1.060e-14
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   12 EEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICI 62
            +EG  C+ CG+D D D VLLCD C  E+HM+CL+PPL  +PEG+W CP CI
Sbjct:  219 DEGV-CKVCGIDKDDDSVLLCDTCDSEYHMYCLNPPLARIPEGNWYCPSCI 268          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A5N6LNH1_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LNH1_9ASTR)

HSP 1 Score: 77.0 bits (188), Expect = 1.070e-14
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
Query:   12 EEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICIAT 64
            E+G  C+ CG+D D D VLLCD C  E+HM+CLDPPL  +P+G+W CP C+++
Sbjct: 1150 EDGV-CKVCGMDKDDDSVLLCDKCDSEYHMYCLDPPLARIPDGNWYCPSCMSS 1201          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A6P5GVX0_ANACO (methyl-CpG-binding domain-containing protein 9 isoform X1 n=5 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GVX0_ANACO)

HSP 1 Score: 77.0 bits (188), Expect = 1.070e-14
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   12 EEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEAVPEGDWLCPICI 62
            +EG  C+ CG+D D D VLLCD C  E+HM+CL+PPL  +PEG+W CP CI
Sbjct: 1224 DEGV-CKVCGIDKDDDSVLLCDTCDSEYHMYCLNPPLARIPEGNWYCPSCI 1273          
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Match: A0A6G0XK87_9STRA (PHD-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK87_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.920e-14
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:   17 CEKCGLDNDADHVLLCDN-CPREFHMWCLDPPLEAVPEGDWLCPICI 62
            CEKC ++N+ D +LLCDN C RE+HM+CL PPLE VPE DW CP C+
Sbjct:  421 CEKCHMNNNHDKILLCDNNCGREYHMYCLKPPLEVVPEEDWFCPECV 467          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21323.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
S8CBZ7_9LAMI1.920e-1654.17PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A2J7ZHW2_9CHLO5.460e-1654.84Lysine-specific demethylase lid (Fragment) n=1 Tax... [more]
A9TBW6_PHYPA1.660e-1555.77Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A7I4C0B1_PHYPA1.660e-1555.77Uncharacterized protein n=4 Tax=Physcomitrium pate... [more]
A0A2K1L4D6_PHYPA4.240e-1553.85Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A6J0P9G9_ELAGV5.760e-1558.82methyl-CpG-binding domain-containing protein 9 n=6... [more]
A0A199UZ30_ANACO1.060e-1458.82Methyl-CpG-binding domain-containing protein 9 n=1... [more]
A0A5N6LNH1_9ASTR1.070e-1454.72Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A6P5GVX0_ANACO1.070e-1458.82methyl-CpG-binding domain-containing protein 9 iso... [more]
A0A6G0XK87_9STRA1.920e-1463.83PHD-type domain-containing protein n=1 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 16..62
e-value: 2.1E-11
score: 53.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..77
e-value: 2.8E-21
score: 76.9
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 17..62
e-value: 2.4E-11
score: 43.3
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 14..64
score: 9.952801
NoneNo IPR availablePANTHERPTHR47162OS02G0192300 PROTEINcoord: 12..72
NoneNo IPR availablePANTHERPTHR47162:SF3OS02G0192300 PROTEINcoord: 12..72
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 17..61
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 3..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21323contigP-wetherbeei_contig21323:927..1160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21323.1.1mRNA_P-wetherbeei_contig21323.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig21323 927..1160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig21323.1.1 ID=prot_P-wetherbeei_contig21323.1.1|Name=mRNA_P-wetherbeei_contig21323.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp
SDDDDSSSASEEEGTSCEKCGLDNDADHVLLCDNCPREFHMWCLDPPLEA
VPEGDWLCPICIATARKKGAAAAAAGAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD