prot_P-wetherbeei_contig21296.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig21296.1.1
Unique Nameprot_P-wetherbeei_contig21296.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length91
Homology
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BLAST of mRNA_P-wetherbeei_contig21296.1.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 6.110e-24
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0 
Query:    1 RALKAQRCRVFGSSGLVLETGTHLEDIMMADYFQIDDRMVASPDPSGQGVTVSVTVAIRFFKSTMLRRTIETKSLKDSQQWW 82
            RA+K QRCR++   GL+LET THLEDI+M+DYFQIDDR V  P   G  V V V + I+FFKSTM R+TIETKSL +++Q W
Sbjct:  522 RAVKLQRCRLYDEHGLILETSTHLEDILMSDYFQIDDRCVVQPGQDG-AVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVW 602
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BLAST of mRNA_P-wetherbeei_contig21296.1.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 8.300e-24
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0 
Query:    1 RALKAQRCRVFGSSGLVLETGTHLEDIMMADYFQIDDRMVASPDPSGQGVTVSVTVAIRFFKSTMLRRTIETKSLKDSQQWW 82
            RA+K QRCR++   GL+LET THLEDI+M+DYFQIDDR V  P   G  V V V + I+FFKSTM R+TIETKSL +++Q W
Sbjct:  413 RAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQPGQDG-AVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVW 493
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BLAST of mRNA_P-wetherbeei_contig21296.1.1 vs. uniprot
Match: A0A8J2ST97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST97_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.110e-8
Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 0 
Query:    1 RALKAQRCRVFGSSGLVLETGTHLEDIMMADYFQIDDRMVASPDPSGQGVTVSVTVAIRFFKSTMLRRTIETKSLKDSQQWW 82
            R  K QRCR FG  GLVL     +EDI   D F I DR V +P     GV V+    +++ KST+ +R IE+ S  D Q ++
Sbjct:  316 RTTKIQRCRAFGRHGLVLHGVLSMEDIPYRDCFAIHDRWVVTP--RDDGVDVAFEFEVKWSKSTIFKRKIESSSRSDLQAYY 395
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21296.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0Q2_9PHAE6.110e-2460.98VASt domain-containing protein (Fragment) n=1 Tax=... [more]
D7FKF6_ECTSI8.300e-2460.98VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8J2ST97_9STRA2.110e-841.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031968VASt domainPFAMPF16016VAStcoord: 4..76
e-value: 1.3E-8
score: 35.4
IPR031968VASt domainPROSITEPS51778VASTcoord: 1..90
score: 13.75226
NoneNo IPR availablePANTHERPTHR47666PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTICcoord: 3..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21296contigP-wetherbeei_contig21296:276..807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21296.1.1mRNA_P-wetherbeei_contig21296.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig21296 276..807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig21296.1.1 ID=prot_P-wetherbeei_contig21296.1.1|Name=mRNA_P-wetherbeei_contig21296.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp
RALKAQRCRVFGSSGLVLETGTHLEDIMMADYFQIDDRMVASPDPSGQGV
TVSVTVAIRFFKSTMLRRTIETKSLKDSQQWWTVREFYKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt