prot_P-wetherbeei_contig206.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig206.3.1
Unique Nameprot_P-wetherbeei_contig206.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length305
Homology
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BLAST of mRNA_P-wetherbeei_contig206.3.1 vs. uniprot
Match: A0A836CH18_9STRA (HMA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH18_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.920e-9
Identity = 66/210 (31.43%), Postives = 93/210 (44.29%), Query Frame = 0 
Query:   26 QLLFNTFGWGCLGFRSLERGRSLYLAIHAMAIALLWLRKAGAARQSTGGCDCGSAPTSSRGDLAGR---LASSFLLLALAFSEHGVRFINDRGGLRALLKAACSVSRRPVLVAPGTATHAGIAVAWPAAMKQDGPALKPAVVHLENATLCAEETE--VVAMSREGETLELRV--LRFNIAGMKCEGCRHGVLSALTAHKWVASAEVKLGG 228
            QL+ N  G GC GFR LE  + ++LA++A+A+A    R   AA  S+G    G+  + +     GR   LA +   L+L FSE  +R  N+RG     ++      R P   +P   T                           +A +CA E    V     EGE +  RV  +   I GM+CEGCR GV+SAL A   V +  V + G
Sbjct:   46 QLVLNLLGTGCAGFRKLEAYKPVWLALNAVALA----RCCSAAAISSG--PLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRG-----VRRGGKPPRLPSESSPAAPTL--------------------------DAAVCAAEARHGVTLQVGEGEPVHERVDAVHLTIGGMRCEGCRRGVISALAAVPGVVTVTVSMAG 218
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig206.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CH18_9STRA9.920e-931.43HMA domain-containing protein (Fragment) n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 191..283
e-value: 2.9E-9
score: 39.2
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score: 6.0
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 192..281
score: 11.300536
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 195..280
e-value: 8.58509E-5
score: 37.9705
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 189..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig206contigP-wetherbeei_contig206:7829..8743 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig206.3.1mRNA_P-wetherbeei_contig206.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig206 7773..8933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig206.3.1 ID=prot_P-wetherbeei_contig206.3.1|Name=mRNA_P-wetherbeei_contig206.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=305bp
MLLKVSRILPSLSCLLHFITALLSCQLLFNTFGWGCLGFRSLERGRSLYL
AIHAMAIALLWLRKAGAARQSTGGCDCGSAPTSSRGDLAGRLASSFLLLA
LAFSEHGVRFINDRGGLRALLKAACSVSRRPVLVAPGTATHAGIAVAWPA
AMKQDGPALKPAVVHLENATLCAEETEVVAMSREGETLELRVLRFNIAGM
KCEGCRHGVLSALTAHKWVASAEVKLGGNNDAAAAASAGICGQEQRLLGG
IASVTVTADAPDGSSLKLVEAVSRAGYTASLGDATEIGEEGGSASCPLDT
VFLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
IPR036163HMA_dom_sf