prot_P-wetherbeei_contig2059.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2059.2.1
Unique Nameprot_P-wetherbeei_contig2059.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length616
Homology
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BLAST of mRNA_P-wetherbeei_contig2059.2.1 vs. uniprot
Match: A0A835YKB6_9STRA (TNFR-Cys domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB6_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.300e-20
Identity = 124/483 (25.67%), Postives = 167/483 (34.58%), Query Frame = 0 
Query:  102 DRDALAAAGIGHNRSYTWIFLDAGVFTSAAGEAST-----------VLFGIDTLPSTPLSALKVTVDATRPTLVRWTLQREERAIYMFFSEAVDITSADASLLSLSTNSTGXXXXNASVALSCSGTKRGRNELRELIVWLETACVNVTSGSAVDGVGSVMSSWTSQVPWPDAATDWERTLAALGPSLSDAAAGTALFLTAAAGFIDDYALPGNALVAADAVPEGFPDCQPCSPNAAPRTAAP------------NGTYRATPCTA-----------VYDAVCAPCRAXXXXXXXXXXXXXXXXXXXXXXXTPCAYETFEVVPCAGDDIGGGISXXXXXXXXXSSDDSSRNGSDGDRVCAPCRQCTGSIEFEA-------------VDCRRSXXXXXXXXXXXXXDW-----------------------GSETAVWAERV---CLDKPAIRQWRNENCCRDSEGEPVDCHDAILREIEITARR 511
            D D L  AG+GH    TWIF+ AG   +A    +             + G +      L A  VT D   P L+R TL     A+Y+FF EAVDI +     +SL  +        A+V L+CS    GR   RE+I+ L T C++    +                     ATDW     +L  +  + AA T L  +A  G+I DY +P N   A  A+ +  PDC PC  +     +AP            +GT+ + PCTA            YDA C+ C A                         C  +T+ +  C  +                            D VCA CR C  S                    CR                                        G+  A+ A        D  A+R WR+E+CC+DSE  PV C  A LRE  I ARR
Sbjct:   20 DLDNLKVAGVGHQLGDTWIFMPAGALGAATAARAPSXXXXXXXXXXAVRGQEVYGQRGLVAQAVTPDTAPPLLLRHTLAFAHAALYLFFDEAVDIATLSTGAVSLGVSG------GAAVPLACSAAAYGRWLAREVILDLRTPCLDARGNAT-------------------GATDWS----SLRTAGINGAAPTVL--SAWGGYIADYGIPANEAAAVVAMAKTGPDCSPCVGSTFKFMSAPCNLQYLNPQPCASGTFMSAPCTAHXXXXXXXXXXQYDAACSRCSAA------------------------CPGDTYRLAECTPET---------------------------DLVCAACRDCPTSTYISGGCXXXXXXXXXXXTVCRAQPQGPIEPPLPPQYQLTDXXXXXXXXXXXXXXXPPPRIPGAAAAIAAPSPLGPACDTAAVRTWRDEHCCKDSERRPVACSQAPLREDAIAARR 420
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2059.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YKB6_9STRA1.300e-2025.67TNFR-Cys domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..615

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2059contigP-wetherbeei_contig2059:547..3117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2059.2.1mRNA_P-wetherbeei_contig2059.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2059 524..3117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2059.2.1 ID=prot_P-wetherbeei_contig2059.2.1|Name=mRNA_P-wetherbeei_contig2059.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=616bp
MHALGSVLLVFCSISVVVCDGGPILKSFTLDMDSSRLSLTWSAAMSAARE
DCDWSGVTLRTQNTAHNSDGASLSYTQSEDGYGTPSLSLSWKQITVEVHP
LDRDALAAAGIGHNRSYTWIFLDAGVFTSAAGEASTVLFGIDTLPSTPLS
ALKVTVDATRPTLVRWTLQREERAIYMFFSEAVDITSADASLLSLSTNST
GGGGGNASVALSCSGTKRGRNELRELIVWLETACVNVTSGSAVDGVGSVM
SSWTSQVPWPDAATDWERTLAALGPSLSDAAAGTALFLTAAAGFIDDYAL
PGNALVAADAVPEGFPDCQPCSPNAAPRTAAPNGTYRATPCTAVYDAVCA
PCRAACPADHYRVAACTAEGDLVCRRCTPCAYETFEVVPCAGDDIGGGIS
GGGISAGTNSSDDSSRNGSDGDRVCAPCRQCTGSIEFEAVDCRRSSGGDR
QCESCERCDWGSETAVWAERVCLDKPAIRQWRNENCCRDSEGEPVDCHDA
ILREIEITARRGRHPIASLEAATAAALTTAGGLAPLSMDLGQRTAIDASS
SSRRRSSSSSSSSSRLSSSMSASDTTGSIADSGGFSSSAFAHERNEGMTR
RGRRRRGRLPAAPAG*
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