prot_P-wetherbeei_contig20146.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20146.1.1
Unique Nameprot_P-wetherbeei_contig20146.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length205
Homology
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: UPI000FD940A7 (type IV pilus biogenesis/stability protein PilW n=1 Tax=Sulfurivermis fontis TaxID=1972068 RepID=UPI000FD940A7)

HSP 1 Score: 147 bits (371), Expect = 1.500e-40
Identity = 84/199 (42.21%), Postives = 125/199 (62.81%), Query Frame = 0
Query:    8 VTVLLLGL-LLSACQSTSTVVKPQSDRVKLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAVA 205
            V +LL  L LLS C  T    +  +D  K A++N ELG  YM   + ++AM+KL KA+E D  +V AH  +A L+  + + ++A   F++A  L   +S++ NNYG FLC  +RY+EG   +LKAV NP++P     Y N+G C ++ G + +A+ Y+R+AL+ N  +  ALL MAD+SLQ    + ARA+LQRY+AVA
Sbjct:    6 VLILLSALALLSGCAGTPE--RDTTDFKKAAQLNAELGLNYMVQGKNELAMEKLLKAVEYDDDSVEAHHYIAELYRRLERKDKAGEHFQRAADLAPNDSAIQNNYGVFLCGEKRYDEGVTRLLKAVENPVWPGRGQAYENLGQCLLEKGDMVRAEQYYREALKVNVNLPKALLAMADISLQQGNHISARAFLQRYAAVA 202          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: A0A3N5G5J6_9GAMM (Type IV pilus biogenesis/stability protein PilW (Fragment) n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5G5J6_9GAMM)

HSP 1 Score: 143 bits (361), Expect = 1.090e-39
Identity = 77/197 (39.09%), Postives = 119/197 (60.41%), Query Frame = 0
Query:    5 DRAVTVLLLGLLLSACQST-STVVKPQSDRVKLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQR 200
            +R   +    L+L+AC S  S   KPQ +R   AEIN ELG  Y++      A +K+ +++E D RN + HS   +L+  +G  ++A++ +++A+ LD  N+ + NNY  FLCQR ++  GEK  L+A ANPLY   E    N G C+   G L++A+ ++R+AL+   + A ALLQMAD+  Q  + + ARA+LQR
Sbjct:    2 NRTTVIACASLVLAACVSNESGRSKPQPERA--AEINRELGIDYLRKGNLAGAKEKIERSLEQDSRNASTHSIAGMLYDQLGDEKKADSHYERAVSLDPQNADIRNNYAVFLCQRNKFARGEKQALEAAANPLYKTPEVALLNAGNCSRNAGDLKRAEEHYRRALQLRPRFAEALLQMADMEFQQAQYISARAFLQR 196          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: A0A090BUU1_9GAMM (TPR repeat containing protein n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090BUU1_9GAMM)

HSP 1 Score: 145 bits (365), Expect = 1.260e-39
Identity = 77/194 (39.69%), Postives = 119/194 (61.34%), Query Frame = 0
Query:   12 LLGLLLSACQSTSTVVKPQSDRVKLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAVA 205
            LLGL+L +  S +          + AEIN +LG +YM+     IA+++LTKA++LD    +AH+ +A+L+  +G N  AE  +++A  L   +S + NNYGQFLC+++ +EE  +  LKA+ NP+Y   E  Y N G+CA+    + QA+ YFR+AL+ N + A AL QMA ++ + +    AR YL RY +VA
Sbjct:   11 LLGLMLLSACSRNIEENNHPPGEEAAEINLQLGVEYMRRGRNDIALNRLTKALKLDDNYADAHNAIAVLYERLGLNADAEQHYQRATALKPNDSDIYNNYGQFLCKQKHWEEANQAFLKALENPVYQTPEIPYTNAGLCALHNNNISQAETYFRQALQSNSKFASALYQMAQLNYEQKHYQTARDYLTRYESVA 204          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: A0A3E0X1G5_9GAMM (Type IV pilus biogenesis/stability protein PilW n=1 Tax=Alkalilimnicola ehrlichii TaxID=351052 RepID=A0A3E0X1G5_9GAMM)

HSP 1 Score: 144 bits (364), Expect = 1.920e-39
Identity = 79/195 (40.51%), Postives = 125/195 (64.10%), Query Frame = 0
Query:   11 LLLGLLLSACQSTSTVVKPQSDRVKLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAVA 205
            L   LL+S C +TS   +PQS   + + INT+LG +YM+  E + A +KL +A+  D R  +AH+TLALL+  + ++  A   +++A++L   +SS++NNYG+FLC +    + E+  L+AV NPLY   E  Y N+G+C ++  + E+A+  F KALE N + APALL++A++ L+   A+ AR + QRY  VA
Sbjct:   11 LAFALLVSGC-ATSGTDRPQSADQRASRINTQLGVEYMRQGELEQAKEKLQRAVAQDARYADAHATLALLYDRLNEHNDARRHYRRAVQLAPEDSSILNNYGRFLCAQGNISQAERHFLRAVENPLYRTPEVPYTNLGLCLIRDDRPEEAEASFLKALEANPRFAPALLRVAELRLEGGHAMSARGFYQRYLDVA 204          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: A4BSV2_9GAMM (Tfp pilus assembly protein PilF n=1 Tax=Nitrococcus mobilis Nb-231 TaxID=314278 RepID=A4BSV2_9GAMM)

HSP 1 Score: 144 bits (362), Expect = 4.150e-39
Identity = 77/203 (37.93%), Postives = 126/203 (62.07%), Query Frame = 0
Query:    4 RDRAVTVLLLGLLLSACQSTSTVVKPQSDRV-KLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAVA 205
            R  AV + +  ++L+A  +T +  +P  + + K +EINT++G +Y+Q  E Q A+ KL KA++ D  N +AH TL +++  + +  QA A +++A++L   NSS +NNYGQFLC+R+ Y+  E++ L+A  NP Y + +    N GVCA+Q G  ++A+ +F +AL++  +   AL  MA +    +  L AR Y QRY AVA
Sbjct:    3 RYAAVLLTVCNMVLAAGCATDSKPRPSPEALQKASEINTQIGIRYLQTGELQQAVRKLEKALKQDAGNADAHMTLGVVYERLDETVQARAHYRRAIELQPNNSSALNNYGQFLCERDEYDRAERLFLRAAENPTYESPQVPLANAGVCAIQDGDTKRAEDFFLRALKYEPRFPSALAHMAQLRFDGRHFLSARGYYQRYLAVA 205          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: UPI000E30F60D (type IV pilus biogenesis/stability protein PilW n=1 Tax=Steroidobacter cummioxidans TaxID=1803913 RepID=UPI000E30F60D)

HSP 1 Score: 142 bits (358), Expect = 1.780e-38
Identity = 79/208 (37.98%), Postives = 116/208 (55.77%), Query Frame = 0
Query:    3 MRDRAVTVLLLGLLLSACQSTSTVVKPQS------DRVKLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAV 204
            MR  AV +L++   L+ C S+++V           D  + AEIN ELG  Y++      A +K+ +AIE +PRN  A  T  +L+  +G++ +AE+ F + L LD  N  V NNYG +LCQ+ ++  GEK+++ A  NPLY   E  Y N   CA  GG L++A+   RKAL    +   AL QMAD+  +    L AR +L+RY  V
Sbjct:    1 MRSTAVALLVVSAALAGCVSSTSVSSSNKKQLGTPDNARAAEINLELGIDYLRKNNLVQAKEKIDRAIEQNPRNSKAQITAGMLYERLGESNKAESHFAKGLALDPKNPEVQNNYGAYLCQKGKHARGEKLMIDAATNPLYRTPEVAYLNAANCARSGGDLQRAEDNLRKALAVRPKFGDALFQMADLQYKQTDYLSARGFLERYMEV 208          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: A0A6B3WAA5_9GAMM (Type IV pilus biogenesis/stability protein PilW n=1 Tax=Wenzhouxiangella sp. XN201 TaxID=2710755 RepID=A0A6B3WAA5_9GAMM)

HSP 1 Score: 142 bits (358), Expect = 1.970e-38
Identity = 85/210 (40.48%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    6 RAVTVLLLGLLLSACQSTSTVVKPQS-------DRV---KLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAVA 205
            R +  +LL  LL  C +TS V    S       DRV   + A+INT LG  Y +  + Q+A++KL +AIELDP +V AH T+AL+   +GQ+ +A   +++A++L   + + +N+Y  FLC+   Y E EK+  +AV +P Y   E  Y N G CA++  + EQA GY R+ALE + Q A AL Q+A V +    A + RA+LQRY +VA
Sbjct:    5 RIILAVLLAALLGGC-ATSNVEPDYSGSGRSGMDRVSPVRAADINTRLGVGYFERGDLQLAVEKLERAIELDPVHVPAHVTMALVRERLGQSSRARRHYREAVELAPGDGATLNSYAAFLCRNGEYAEAEKLFDRAVNDPFYRTPEVAYTNAGACALRNDEHEQALGYLREALEHDEQYAAALYQLARVYVARDEAFRGRAFLQRYESVA 213          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: A0A1G6V2F5_9GAMM (Type IV pilus assembly protein PilF n=2 Tax=Aquimonas voraii TaxID=265719 RepID=A0A1G6V2F5_9GAMM)

HSP 1 Score: 141 bits (355), Expect = 4.500e-38
Identity = 78/202 (38.61%), Postives = 123/202 (60.89%), Query Frame = 0
Query:    4 RDRAVTVLLLGLLLSACQST-STVVKPQSDRVKLAEIN-TELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSA 203
            R   V ++L  L L+ C+ST +T  + +     +A  N  ++G  YMQ  + QIA+++LTKA+EL+PR+ +AH+ +A+L+  I + E+AE  +++A++L+  + SV NNYGQFLC+  R++E +    KA+ +P YP     Y N GVCAM+ G+  +AD Y R ALE        L  +A +       L+ARA+LQR+ A
Sbjct:    3 RLEIVVLMLCALALAGCESTGNTRSRAEDSPNAIAAANHVQMGRAYMQRGQLQIALERLTKALELNPRSTDAHTVIAVLYEEIRRPERAEIHYRRAVELEPEDGSVNNNYGQFLCRAGRFDEADARFAKAIDDPFYPTPALVYTNAGVCAMKAGRWPEADRYLRSALEIEPGSPAVLFDLARLQFAKGELLRARAFLQRHEA 204          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: UPI00101CB565 (type IV pilus biogenesis/stability protein PilW n=1 Tax=Steroidobacter soli TaxID=2497877 RepID=UPI00101CB565)

HSP 1 Score: 141 bits (355), Expect = 4.990e-38
Identity = 77/210 (36.67%), Postives = 121/210 (57.62%), Query Frame = 0
Query:    3 MRDRAVTVLLLGLLLSACQSTS--------TVVKPQSDRVKLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAV 204
            M+  AV +L++   L+ C S++        T+ KP ++R   AEIN ++G  Y++      A +K+ +A+E +PRN  A +T  +L+  +G++ +AEA F + L LD  N  + NNYG FLCQ+ +YE G K+++ A +NPLY   E  Y N   CA  GG ++ A+   R AL+   +   AL+QMAD+  +    L AR +L+RY  V
Sbjct:    1 MKRAAVALLVVTAALAGCVSSNNVSTSNRKTLGKPDNERA--AEINLQIGTDYLRKNNLVQAKEKIDRAVEQNPRNAQAQTTAGMLYERLGESNKAEAYFAKGLSLDPKNPELQNNYGAFLCQKGKYERGAKLMIDAASNPLYRTPEVAYLNAANCARNGGDMKAAEANLRSALKVRPKFGEALIQMADLQYKQTDYLSARGFLERYQEV 208          
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Match: A0A1G5Q1R6_9GAMM (Type IV pilus assembly protein PilF n=1 Tax=Thiohalomonas denitrificans TaxID=415747 RepID=A0A1G5Q1R6_9GAMM)

HSP 1 Score: 140 bits (354), Expect = 5.020e-38
Identity = 80/202 (39.60%), Postives = 121/202 (59.90%), Query Frame = 0
Query:    4 RDRAVTVLLLGLLLSACQSTSTVVKPQSDRVKLAEINTELGAQYMQNREYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKLDAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVCAMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQRYSAVA 205
            R  A+ +L  GL L+ C  T     P     K AE+N ++G +YMQ    + AM+KL +A+  D R+  A+  LA+L+  + + E AE  F++A++    +SS++NN+G FLC   +YEEGE + L+ + +P+YP     + N+G+C  + G L++A+ Y RKAL  N +M  +L  MAD+S Q    L ARAYLQRY  VA
Sbjct:    3 RVAAILILGAGLALAGCAGT-----PTQHAEKSAEVNAQMGLRYMQQGNNERAMEKLQRALSFDQRHGGANHYLAILYQRLDRPEDAEVHFRRAIRALPDDSSLLNNFGAFLCSSGQYEEGEGLFLEVLDDPVYPQRPAVHENLGLCKTRQGNLQEAETYLRKALSQNPRMHKSLFGMADLSYQKGNYLSARAYLQRYRDVA 199          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20146.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000FD940A71.500e-4042.21type IV pilus biogenesis/stability protein PilW n=... [more]
A0A3N5G5J6_9GAMM1.090e-3939.09Type IV pilus biogenesis/stability protein PilW (F... [more]
A0A090BUU1_9GAMM1.260e-3939.69TPR repeat containing protein n=1 Tax=Thioploca in... [more]
A0A3E0X1G5_9GAMM1.920e-3940.51Type IV pilus biogenesis/stability protein PilW n=... [more]
A4BSV2_9GAMM4.150e-3937.93Tfp pilus assembly protein PilF n=1 Tax=Nitrococcu... [more]
UPI000E30F60D1.780e-3837.98type IV pilus biogenesis/stability protein PilW n=... [more]
A0A6B3WAA5_9GAMM1.970e-3840.48Type IV pilus biogenesis/stability protein PilW n=... [more]
A0A1G6V2F5_9GAMM4.500e-3838.61Type IV pilus assembly protein PilF n=2 Tax=Aquimo... [more]
UPI00101CB5654.990e-3836.67type IV pilus biogenesis/stability protein PilW n=... [more]
A0A1G5Q1R6_9GAMM5.020e-3839.60Type IV pilus assembly protein PilF n=1 Tax=Thioha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 141..174
e-value: 0.085
score: 22.0
coord: 71..104
e-value: 0.033
score: 23.3
coord: 37..70
e-value: 0.0074
score: 25.5
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 143..171
e-value: 0.024
score: 14.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 141..174
score: 8.4669
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 71..104
score: 8.5849
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 37..70
score: 12.0069
IPR013360Pilus biogenesis/stability type IV, PilWTIGRFAMTIGR02521TIGR02521coord: 10..204
e-value: 7.2E-55
score: 184.0
NoneNo IPR availablePFAMPF13431TPR_17coord: 61..91
e-value: 2.5E-5
score: 24.3
NoneNo IPR availablePANTHERPTHR45586TPR REPEAT-CONTAINING PROTEIN PA4667coord: 40..200
NoneNo IPR availablePANTHERPTHR45586:SF11LIPOPOLYSACCHARIDE ASSEMBLY PROTEIN Bcoord: 40..200
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 6.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 32..205
e-value: 2.5E-49
score: 170.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 37..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20146contigP-wetherbeei_contig20146:2..616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20146.1.1mRNA_P-wetherbeei_contig20146.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20146 2..616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20146.1.1 ID=prot_P-wetherbeei_contig20146.1.1|Name=mRNA_P-wetherbeei_contig20146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=205bp
MGMRDRAVTVLLLGLLLSACQSTSTVVKPQSDRVKLAEINTELGAQYMQN
REYQIAMDKLTKAIELDPRNVNAHSTLALLHAVIGQNEQAEASFKQALKL
DAANSSVMNNYGQFLCQRERYEEGEKMILKAVANPLYPNAENGYYNVGVC
AMQGGKLEQADGYFRKALEFNGQMAPALLQMADVSLQLQRALQARAYLQR
YSAVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR013360Pilus_4_PilW
IPR011990TPR-like_helical_dom_sf