prot_P-wetherbeei_contig20077.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20077.1.1
Unique Nameprot_P-wetherbeei_contig20077.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length216
Homology
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A167FLU2_9ASCO (Hrb1p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167FLU2_9ASCO)

HSP 1 Score: 126 bits (316), Expect = 7.090e-31
Identity = 84/195 (43.08%), Postives = 115/195 (58.97%), Query Frame = 0
Query:   34 RLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVRED--------------TGGVQGXXXXXXXXXXXXXXXXXXTGGAGCQVYVNNITEATTWMDLKDLFKTVGPV-RIEVPEQRPGRTRHAIA-LFGTPDAAAAAIHQYNGTNFGGARITVKLDR 212
            R+YVGNLAY V+W  LKD M+QAGDV  AD+ +  NGRS+G  +VEY +A +A +A+  LN   L +R + +RED              + G            XXXXXXXXX    G Q++VNN+  +T W +LKDLF++ G V R+++     G++R A   LF TP+ A AAI QYNG +F G  + V+ DR
Sbjct:   95 RVYVGNLAYDVRWQQLKDFMKQAGDVVRADVLIGPNGRSKGCGIVEYATADEAQRAVETLNNQSLNNRLVFIREDRESGSRSSHNGPPPSSGAGPGSFSRDRVGXXXXXXXXXXXVPGTQLFVNNLPYSTGWQELKDLFRSSGNVLRVDLKLNFNGKSRGAATVLFETPEEAQAAIQQYNGYDFQGRPLEVRQDR 289          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A7S2LTJ8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LTJ8_9DINO)

HSP 1 Score: 124 bits (312), Expect = 8.380e-31
Identity = 79/189 (41.80%), Postives = 108/189 (57.14%), Query Frame = 0
Query:   34 RLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDTGGVQGXXXXXXXXXXXXXXXXXXTGGAG---CQVYVNNITEATTWMDLKDLFKTVGPV-RIEVPEQ---RPGRTR-HAIALFGTPDAAAAAIHQYNGTNFGGARITVKLDRNA 214
            R+YVGNLA+ V W +LKDHM+Q G+VAFAD+ ++  GRSRG  LV YR+A DAA+AI+ L++S L  R I VRED     G                   GGAG   C+VYV N+  + TW DLKD F+  G + R +V  +     GR++ + +  F T   A AA+ + + T   G +I V+ DR A
Sbjct:   24 RVYVGNLAWNVSWKELKDHMKQVGEVAFADVMLEPGGRSRGCGLVAYRTADDAAQAIKELHDSDLMGRQIFVREDREQNNGSG----------------AGGAGRQDCRVYVGNLPWSCTWRDLKDHFRKAGEISRADVLYEGGIEGGRSKGYGLVEFRTAAEAKAAVTELSETELLGRQIFVREDREA 196          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A060SZ12_BLAAD (ARAD1C01606p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060SZ12_BLAAD)

HSP 1 Score: 125 bits (313), Expect = 9.050e-31
Identity = 76/182 (41.76%), Postives = 99/182 (54.40%), Query Frame = 0
Query:   34 RLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDTGGVQGXXXXXXXXXXXXXXXXXXTGGAGCQVYVNNITEATTWMDLKDLFKTVGPVRIEVPEQRPGRTRHA-IALFGTPDAAAAAIHQYNGTNFGGARITVKLDRNA 214
            R+YVGNL Y V+W DLKD M+QAGDVA AD+ +  +GRS+G  +VE+ +A DA  AI+ L+    K R +LVRED                        +G  G Q++V NI  +  W DLKDLFK +GPV         GR+R   + LF     A AAI Q NG N+ G  + V+ DR A
Sbjct:   74 RVYVGNLPYDVRWQDLKDFMKQAGDVAHADVWLLPDGRSKGCGIVEFANAEDAQNAIKTLHNIDWKGRPLLVREDR----------------EEAPPMHSGAPGAQLFVTNIPYSADWRDLKDLFKEIGPVVRADIHMSGGRSRGTGVVLFENAGDAKAAIDQLNGYNWNGLYLEVREDRFA 239          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A7S0HEK0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEK0_9EUKA)

HSP 1 Score: 126 bits (317), Expect = 1.320e-30
Identity = 74/179 (41.34%), Postives = 101/179 (56.42%), Query Frame = 0
Query:   35 LYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDTGGVQGXXXXXXXXXXXXXXXXXXTGGAGCQVYVNNITEATTWMDLKDLFKTVGPV-RIEVPEQRPGRTR-HAIALFGTPDAAAAAIHQYNGTNFGGARITVKLD 211
            +YVGNL + V W DLKDH +  G V  ADI M+ +GRS+G  LV++ +AR+A++AI  L+++ L  R I VRED                         GGAGC++YV N++  TTWMDLKDLF+  G V R EV   R G ++ +     GT   AA AI   N ++F G R+ V+ D
Sbjct:  308 VYVGNLTWTVAWQDLKDHFKTIGPVLNADIMMEEDGRSKGCGLVKFATAREASRAIAELHDAELDGRKIFVREDR---------------------ETAGGAGCKLYVGNLSPGTTWMDLKDLFREAGTVLRAEVAADREGGSKGYGTVEMGTTRDAAKAIQLLNDSDFKGGRLDVRPD 465          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A061DEP8_BABBI (Single stranded G-strand telomeric DNA-binding protein, putative n=1 Tax=Babesia bigemina TaxID=5866 RepID=A0A061DEP8_BABBI)

HSP 1 Score: 119 bits (298), Expect = 3.910e-30
Identity = 71/185 (38.38%), Postives = 103/185 (55.68%), Query Frame = 0
Query:   34 RLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDTGGVQGXXXXXXXXXXXXXXXXXXTGG---AGCQVYVNNITEATTWMDLKDLFKTVGPV-RIEVPEQRPGRTRH-AIALFGTPDAAAAAIHQYNGTNFGGARITVKLDRN 213
            R+YVGNL++ V+W DLKDHM+Q G+V  ADI  D +G+S+G  LVE+     A +A+R LN++++ DR I +RED  G Q                    G    AG  V V NI   T+W DLKDLFKT  PV R+++  +  G+++  A   F   + A  AI  +N     G +I+VK +++
Sbjct:    8 RVYVGNLSWKVKWQDLKDHMKQVGEVVRADIIEDYDGKSKGCGLVEFADEETALRAMRELNDTMIYDRPIFIREDREGPQSFRGGRRGPNRDWKQSGGGNGTGEPAGVCVLVTNIQWRTSWQDLKDLFKTCAPVNRVDILTREDGKSKGVAKVYFQNEEDANRAISTFNDYLLDGRKISVKFEQH 192          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A6G0XFH4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFH4_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.360e-29
Identity = 75/190 (39.47%), Postives = 105/190 (55.26%), Query Frame = 0
Query:   32 GARLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDTG-----GVQGXXXXXXXXXXXXXXXXXXTGGAGCQVYVNNITEATTWMDLKDLFKTVGPV-RIEVPEQRPGRTRHA-IALFGTPDAAAAAIHQYNGTNFGGARITVKLDRNA 214
            G R+YVGNL++ V+WM+LKDHMRQAG+V   D+ ++A+GRS+G  LV YR+A  A +AIR L ++ L  R I VRED       G  G                        +VYV+N++ +  W +LKD  K  GPV   +V E+  GR++   I  + TP+ A  AI   N T FG  +I ++ DR A
Sbjct:   81 GRRVYVGNLSWEVKWMNLKDHMRQAGEVEHCDVLVEASGRSKGCGLVTYRTAEMAREAIRTLTDTELLGRKIFVREDREEGAPPGGNGSSYRPPHHPSHPPPATPTGPMTTSRVYVSNLSWSVKWQELKDFMKQAGPVLHADVLEEPSGRSKGCGIVEYDTPEFAERAIRTLNDTQFGDRKIFIREDREA 270          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A023B7E6_GRENI (Putative RNA-binding protein n=1 Tax=Gregarina niphandrodes TaxID=110365 RepID=A0A023B7E6_GRENI)

HSP 1 Score: 117 bits (294), Expect = 1.430e-29
Identity = 72/181 (39.78%), Postives = 105/181 (58.01%), Query Frame = 0
Query:   34 RLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDTGGVQGXXXXXXXXXXXXXXXXXXTGGAGCQVYVNNITEATTWMDLKDLFKTVGPV-RIEVPEQRPGRTR-HAIALFGTPDAAAAAIHQYNGTNFGGARITVKLDR 212
            R+YVGNLA+ V+W DLKDHM+QAG+V + +I ++++GRS+G  +VEY  A  A +AI+ L++S+L DR + VRED    +G                  T G   Q+YVNN+  +TTW +LKDLF     V R ++   R GR+R     +  T + A   I + N   + G R+ VKLD+
Sbjct:    7 RVYVGNLAWRVRWQDLKDHMKQAGEVRYVEI-IESDGRSKGCGIVEYADAESAERAIQTLSDSMLFDRKMFVREDR---EGRRNPTRGYEVRIPPPTEETNGR--QLYVNNLPWSTTWTELKDLFGGNDEVERSDIATDRDGRSRGFGCVIMKTAELANQKIDELNDKEWQGRRLLVKLDQ 181          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A0L0H8I7_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H8I7_SPIPD)

HSP 1 Score: 120 bits (301), Expect = 9.740e-29
Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 0
Query:   26 LVGGGT-GARLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDTGGVQGXXXXXXXXXXXXXXXXXXTGGAGCQVYVNNITEATTWMDLKDLFKTVG--PVRIEV-PEQRPGRTRHA-IALFGTPDAAAAAIHQYNGTNFGGARITVKLDRNA 214
            L GG T G +L+VGNL + VQW +LKD  R+AG+V  AD+AMD  GRSRGY  V   +  +A  AI++LN   ++ R I VRED                            G QV+V N+  ++ W DLKDLF+  G  PV  ++  E   GR++   I  F TP+ A  A+ + NGTN GG  + V+LD+ A
Sbjct:  218 LSGGNTAGRQLFVGNLPFTVQWQELKDLFREAGNVQRADVAMDNQGRSRGYGQVLMATVEEAQMAIKVLNGREVQGRTIEVREDKFAADASSNIP-----------------GTQVFVGNLPYSSRWQDLKDLFRPHGLNPVHADIMAEPGTGRSKGCGIVRFNTPEEAERAVQEVNGTNVGGRNVIVRLDKFA 394          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A433PW57_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PW57_9FUNG)

HSP 1 Score: 120 bits (302), Expect = 1.030e-28
Identity = 76/189 (40.21%), Postives = 102/189 (53.97%), Query Frame = 0
Query:   34 RLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVREDT------GGVQGXXXXXXXXXXXXXXXXXXTGGAGCQVYVNNITEATTWMDLKDLFKTVGPV-RIEVPEQRPGRTRHA-IALFGTPDAAAAAIHQYNGTNFGGARITVKLDRNA 214
            R+YVGNL Y V+W  LKD MR+AGDV FADI +  NG S+G  +VEYR+  DA +AIR LN+++   R + +RED       GGV                       +G QVYV N+  A  W +LKD+F++ G V R +V      R++ +   LF T   A  AI  Y+G  + G RI V+ DR A
Sbjct:   54 RVYVGNLPYEVKWHHLKDFMREAGDVIFADILVQQNGMSKGCGVVEYRTPEDAQRAIRKLNDTLFMGRPVFIREDRESEAKFGGVGANRPV-----------------SGRQVYVGNLPYAVGWQELKDMFRSAGSVVRADVLLDHARRSKGSGTVLFETSQEAMNAISMYDGYEWNGRRIEVREDRYA 225          
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Match: A0A397UPM3_9GLOM (Uncharacterized protein n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UPM3_9GLOM)

HSP 1 Score: 122 bits (306), Expect = 1.190e-28
Identity = 78/195 (40.00%), Postives = 107/195 (54.87%), Query Frame = 0
Query:   34 RLYVGNLAYGVQWMDLKDHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKDRNILVRED--------TG-GVQGXXXXXXXXXXXXXXXXXXTGG-AGCQVYVNNITEATTWMDLKDLFKTVGPV-RIEV---PEQRPGRTRHAIALFGTPDAAAAAIHQYNGTNFGGARITVKLDRNA 214
            R+YVGNLAY V+W  LKD MRQAG+V FAD+ +  NG S+G  +VEYR+  DA +AI  LN++ L  R + +RED        TG  ++                   +GG AG Q+YV N+  +  W +LKDLF+  G + R ++   P++R   +     LF TP  AA AI  Y+G    G RI V+ DR A
Sbjct:  208 RVYVGNLAYEVKWAQLKDFMRQAGEVVFADVLVQPNGMSKGCGVVEYRTPEDARRAIETLNDTQLLGRPVFIREDRETEAKFGTGLSIRPDRALPAPNSNHSHHPTNMSGGNAGRQIYVGNLPYSVGWQELKDLFRNAGNIIRADILIGPDRRSKGS--GTVLFETPADAANAISMYDGFELNGRRIEVREDRFA 400          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20077.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A167FLU2_9ASCO7.090e-3143.08Hrb1p n=1 Tax=Sugiyamaella lignohabitans TaxID=796... [more]
A0A7S2LTJ8_9DINO8.380e-3141.80Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A060SZ12_BLAAD9.050e-3141.76ARAD1C01606p n=1 Tax=Blastobotrys adeninivorans Ta... [more]
A0A7S0HEK0_9EUKA1.320e-3041.34Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A061DEP8_BABBI3.910e-3038.38Single stranded G-strand telomeric DNA-binding pro... [more]
A0A6G0XFH4_9STRA1.360e-2939.47Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A023B7E6_GRENI1.430e-2939.78Putative RNA-binding protein n=1 Tax=Gregarina nip... [more]
A0A0L0H8I7_SPIPD9.740e-2939.69Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A433PW57_9FUNG1.030e-2840.21Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
A0A397UPM3_9GLOM1.190e-2840.00Uncharacterized protein n=3 Tax=Gigaspora TaxID=48... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 34..106
e-value: 7.8E-21
score: 85.2
coord: 139..209
e-value: 6.4E-12
score: 55.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 35..103
e-value: 8.8E-18
score: 63.9
coord: 140..206
e-value: 7.6E-12
score: 44.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 138..213
score: 9.490363
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 33..110
score: 14.69226
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 138..215
e-value: 1.1E-13
score: 53.1
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 28..137
e-value: 4.4E-24
score: 87.1
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 32..162
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 137..213
NoneNo IPR availablePANTHERPTHR23003:SF3FI21236P1coord: 32..162
NoneNo IPR availablePANTHERPTHR23003:SF3FI21236P1coord: 137..213
NoneNo IPR availableCDDcd00590RRM_SFcoord: 140..209
e-value: 5.48684E-14
score: 62.7077
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 33..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20077contigP-wetherbeei_contig20077:1..1073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20077.1.1mRNA_P-wetherbeei_contig20077.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20077 1..1073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20077.1.1 ID=prot_P-wetherbeei_contig20077.1.1|Name=mRNA_P-wetherbeei_contig20077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
AAAAGGGGGGGGGGGGRPGMAPGTRLVGGGTGARLYVGNLAYGVQWMDLK
DHMRQAGDVAFADIAMDANGRSRGYALVEYRSARDAAKAIRMLNESVLKD
RNILVREDTGGVQGGGGGGGGGGGGGFGGGAATGGAGCQVYVNNITEATT
WMDLKDLFKTVGPVRIEVPEQRPGRTRHAIALFGTPDAAAAAIHQYNGTN
FGGARITVKLDRNAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf