prot_P-wetherbeei_contig1990.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1990.2.1
Unique Nameprot_P-wetherbeei_contig1990.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length700
Homology
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BLAST of mRNA_P-wetherbeei_contig1990.2.1 vs. uniprot
Match: A0A6H5JJD6_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJD6_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.430e-6
Identity = 38/69 (55.07%), Postives = 45/69 (65.22%), Query Frame = 0 
Query:   20 EAVRSA-KDCDVEAVREYLERGGDVNTCSSSTLRTLLHWGAAKSSERMVRMLLGYGASVGARTLRQLTP 87
            +AVR A KD DV+AVREYLE G D N  + +T RTLLH    +    M  +LL  GA+ GA TLRQLTP
Sbjct:    8 DAVRHAVKDGDVDAVREYLESGVDANLANPNTGRTLLHIACRQGYPAMASLLLSNGANPGATTLRQLTP 76
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1990.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJD6_9PHAE1.430e-655.07RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..297
NoneNo IPR availableCOILSCoilCoilcoord: 414..434
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 307..348
e-value: 9.7E-11
score: 41.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..699
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..601
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..412
NoneNo IPR availablePANTHERPTHR24180CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATEDcoord: 17..145
coord: 102..224
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 118..144
score: 11.665081
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 83..117
score: 11.930395
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 185..216
score: 12.885525
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 308..348
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 10..45
e-value: 2200.0
score: 2.5
coord: 50..79
e-value: 2.5
score: 17.1
coord: 83..114
e-value: 0.0012
score: 28.1
coord: 118..147
e-value: 0.022
score: 23.9
coord: 151..180
e-value: 7.7
score: 15.5
coord: 185..214
e-value: 4.2E-5
score: 33.0
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 52..100
e-value: 3.7E-8
score: 33.7
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 123..210
e-value: 4.0E-16
score: 59.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 118..150
score: 12.39561
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 185..217
score: 14.10505
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 83..117
score: 13.46401
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 151..183
score: 9.00344
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 17..148
e-value: 1.2E-32
score: 115.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 149..229
e-value: 3.3E-18
score: 67.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 26..224
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 276..350
e-value: 2.8E-12
score: 47.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 309..344
score: 9.966515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1990contigP-wetherbeei_contig1990:2598..5250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1990.2.1mRNA_P-wetherbeei_contig1990.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1990 2187..5276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1990.2.1 ID=prot_P-wetherbeei_contig1990.2.1|Name=mRNA_P-wetherbeei_contig1990.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=700bp
MPSETMAPSDAKTAVLEAAEAVRSAKDCDVEAVREYLERGGDVNTCSSST
LRTLLHWGAAKSSERMVRMLLGYGASVGARTLRQLTPLHLACAAESVNIV
VLRLLLEHGADADARDERGVSGLHLAAQEGDTDAVRLLLQCGADKDGREI
GRWTPLHFAAWAGSAAVTRLLLVANAAADSQEADDGATPLHFACAYGHAQ
VVRVLLDFGAAADLPNADGLLPDQCVGVSVPGDGLLPNDMARLASLLQDR
RASRRGGGSAPALRERCEALQSRVADLEKQLRRARREEQDAAALMHNGAA
LRGAMRPECALCRRGPKAAVFLPCRHLVACGACAATATVCPFCRADITGL
EGGSNGGGGGRGTVAAATAGSASESVESGGGRRGGGGGGAGAGGTDRATS
THSSDEQWRMQAKIRELVRENVDLKTRLAARRRESGMGCGAVGCGPGGCE
ACDASGDGASDDPGGVSGFDIDIDGHGGIDGGGGFRDGGDDGASGGQHDH
DGTGSSSGGENSGGSGHSGDGGGRSGGRSGGRNSRGHGSRDHSGGGGRGH
EEAHGVSGGEFESEDRFANESWGESSSRAGRRGGGDGGGSRSRRPHCQDF
HGGYSHRSAAAAVAPPPSERPQTVWAAAGSETSTAPPSTSGFGFALTATT
QLGMPEGSTGSYNSEGRREREMMRLERASAGTAPEEHAPLLRAPMSPPC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING