prot_P-wetherbeei_contig19835.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19835.1.1
Unique Nameprot_P-wetherbeei_contig19835.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length196
Homology
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: A0A7C4XWA3_9HYPH (50S ribosomal protein L9 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XWA3_9HYPH)

HSP 1 Score: 285 bits (728), Expect = 1.710e-95
Identity = 145/195 (74.36%), Postives = 169/195 (86.67%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDGEGEDAK 195
            MQVILLERIGRLGQMGDVV+VKDGYARN+LLP GKALRATK+N+A+FE RRV LEARNLELK EAE VAA L G TF+AIR+AGDTGQLYGSVS RD++  I+  GF++DRRQ+V+++PIKTLGLH++ V LHPEVIVKVT+NVARS DEAERQARGEDVT++K+E P+LE FS +SVFEEGA P    EGE  K
Sbjct:    1 MQVILLERIGRLGQMGDVVRVKDGYARNYLLPQGKALRATKENLAEFEKRRVQLEARNLELKSEAEAVAARLDGHTFLAIRTAGDTGQLYGSVSSRDLAALISAAGFNVDRRQIVLDRPIKTLGLHKIGVSLHPEVIVKVTINVARSEDEAERQARGEDVTVIKEERPELEVFSAESVFEEGAGPPPADEGESEK 195          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: UPI00036184BB (50S ribosomal protein L9 n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00036184BB)

HSP 1 Score: 284 bits (726), Expect = 3.110e-95
Identity = 148/193 (76.68%), Postives = 170/193 (88.08%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDGEGED 193
            MQVILL+RIGRLGQMGDVV VKDGYARNFLLP  KALRATK+N+A FET+R  LEA NLE K EAE VAA L GK FVAIRSAGDTGQLYGSVS RD+++A+T GGF+IDRRQV++E+PIKTLGLHE KV LHPEV+VKV +NVARS +EAE+QARGEDVT++KDEA +LETF+ DSVFEEGAAP  +GEGE+
Sbjct:    1 MQVILLQRIGRLGQMGDVVNVKDGYARNFLLPQKKALRATKENIAHFETQRSQLEANNLEQKKEAEAVAAKLDGKVFVAIRSAGDTGQLYGSVSTRDLADAVTAGGFTIDRRQVILERPIKTLGLHETKVALHPEVVVKVILNVARSDEEAEKQARGEDVTVIKDEALELETFNPDSVFEEGAAP--EGEGEE 191          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: UPI0019B180A0 (50S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019B180A0)

HSP 1 Score: 282 bits (722), Expect = 1.260e-94
Identity = 148/193 (76.68%), Postives = 166/193 (86.01%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDGEGED 193
            MQVILLERIGRLGQMGDVV VKDGYARNFLLP  KALRAT+DN A FET+R  LEA NLELK EAE VA  L GK FVAIRSAGDTGQLYGSV+ RD+SEA+T GGF+IDRRQV++E+PIKTLGLH+ +V LHPEVIV VT+NVARS DEAERQ+RGEDVTMVK+E  +LETF+ D VFEEGAAPA+  E +D
Sbjct:    1 MQVILLERIGRLGQMGDVVNVKDGYARNFLLPQKKALRATEDNRAHFETQRAQLEANNLELKKEAEAVAGKLEGKIFVAIRSAGDTGQLYGSVATRDISEAVTAGGFTIDRRQVILERPIKTLGLHKTRVALHPEVIVNVTLNVARSEDEAERQSRGEDVTMVKEEKLELETFNPDEVFEEGAAPADVEEKQD 193          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: UPI000930291F (50S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000930291F)

HSP 1 Score: 272 bits (695), Expect = 1.740e-90
Identity = 139/192 (72.40%), Postives = 167/192 (86.98%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDGEGE 192
            MQVILLERIG LGQMGDVV VK+GYARNFLLP  KALRATK+N+A F+T+R  LEA NLE + EA+ VA  L G+ F AIRSAGDTGQLYGSVS RD+++A+T GGF+I+RRQVV+E+PIKTLGLH+ KVQLHPEVIV+V +NVARS +EAERQARGEDVT+VK+EA ++ETF+ D+VFEEGAAP ++ EGE
Sbjct:    1 MQVILLERIGSLGQMGDVVNVKNGYARNFLLPQKKALRATKENLAHFDTQRAQLEANNLERRQEAQDVATKLEGQIFKAIRSAGDTGQLYGSVSTRDIADAVTAGGFTIERRQVVLERPIKTLGLHDTKVQLHPEVIVRVVLNVARSDEEAERQARGEDVTVVKEEALEIETFNPDAVFEEGAAPEQEDEGE 192          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: UPI00092FE81B (50S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI00092FE81B)

HSP 1 Score: 270 bits (691), Expect = 6.390e-90
Identity = 139/187 (74.33%), Postives = 161/187 (86.10%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAE 187
            MQVILL+RIGRLGQMGDVV VKDGYARNFLLP  KALRAT++N   FE++R  LEA NLELK EAE VA  L GK FVAIRSAGDTGQLYGSV+ RD++EA+T GGF+IDRRQV++E+PIKTLG+H V+V LHPEVIV V++NVARS DEAERQARGEDVT+VK+E  +LETF+ D +FEEG APAE
Sbjct:    1 MQVILLQRIGRLGQMGDVVNVKDGYARNFLLPQKKALRATEENRKHFESQRAQLEANNLELKKEAEAVAEKLEGKIFVAIRSAGDTGQLYGSVATRDIAEAVTAGGFTIDRRQVILERPIKTLGVHPVRVALHPEVIVTVSLNVARSEDEAERQARGEDVTVVKEEKMELETFNPDEMFEEGTAPAE 187          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: A0A2S5MYK0_HYPSQ (50S ribosomal protein L9 n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MYK0_HYPSQ)

HSP 1 Score: 267 bits (682), Expect = 1.400e-88
Identity = 134/190 (70.53%), Postives = 165/190 (86.84%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDGE 190
            MQVILL+R+GR+GQMGDVV VKDG+ARNFLLP  KALRATK+N+A FE +R  LEA NLELK EAE VAA L G++F+ IRSAGDTGQLYGSVSPRD++E +T GGF++DR QVVI+KPIKTLGLH  K+QLHPEV+V V++NVARS +EA+RQARGE+VT++KDE   +ET+SED +FEEG+APA++ E
Sbjct:    1 MQVILLQRVGRIGQMGDVVNVKDGFARNFLLPQKKALRATKENLAKFEGQRAQLEANNLELKKEAEAVAAKLDGQSFITIRSAGDTGQLYGSVSPRDIAEVVTAGGFTVDRNQVVIDKPIKTLGLHGAKIQLHPEVLVSVSVNVARSQEEADRQARGENVTVIKDEKLDIETYSED-MFEEGSAPADEAE 189          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: A0A7C2RAP4_9HYPH (50S ribosomal protein L9 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2RAP4_9HYPH)

HSP 1 Score: 266 bits (681), Expect = 2.430e-88
Identity = 137/192 (71.35%), Postives = 162/192 (84.38%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDGEGE 192
            MQVILLERIGRLGQMGDVV VKDGYARNFLLP  KALRAT DN+  FE  R  LEAR+LELK EAE VAA L GK+F+AIR AGDTGQLYGSV+ RD++E +T GGFS+DRRQ+V++KPIKTLGLH  ++ LHPEVIV+V++NVARS +EAERQARGEDVT+VK+E  +LETF+ D++FEE A   + GEGE
Sbjct:    1 MQVILLERIGRLGQMGDVVNVKDGYARNFLLPQKKALRATPDNLKRFERERAQLEARDLELKKEAEAVAARLDGKSFLAIRQAGDTGQLYGSVTSRDIAELVTAGGFSVDRRQIVLDKPIKTLGLHATRIALHPEVIVQVSLNVARSEEEAERQARGEDVTVVKEEGVQLETFNPDALFEEEALARQRGEGE 192          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: V5SFZ1_9HYPH (50S ribosomal protein L9 n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SFZ1_9HYPH)

HSP 1 Score: 263 bits (673), Expect = 4.300e-87
Identity = 141/195 (72.31%), Postives = 163/195 (83.59%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFE-EGAAPAEDGEGEDA 194
            MQVILLERIGRLGQMGDVV V+DGYARNFLLP  KALRAT +N+  FE++R  LEA NLE K EAE VA  LSGK F AIRSAGDTGQLYGSVS RD++E +T+GGF+IDR QVV+E+PIKTLGLH+V + LHPEV VKVT+NVAR+ DEAERQARGEDVT++KDEA ++ETF+ D+ FE E  APA D EGE A
Sbjct:    1 MQVILLERIGRLGQMGDVVSVRDGYARNFLLPQKKALRATAENLKQFESQRAQLEANNLEQKKEAEAVAEKLSGKVFAAIRSAGDTGQLYGSVSTRDLAEVVTQGGFTIDRNQVVLERPIKTLGLHDVTISLHPEVQVKVTINVARTEDEAERQARGEDVTVIKDEAIEIETFNPDAEFEDEDEAPAAD-EGEAA 194          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: A0A1E4CVM3_9HYPH (50S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp. SCN 65-11 TaxID=1660102 RepID=A0A1E4CVM3_9HYPH)

HSP 1 Score: 263 bits (671), Expect = 6.830e-87
Identity = 132/176 (75.00%), Postives = 157/176 (89.20%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSED 176
            M+VILLER+GRLGQMGDVVKVKDGYARNFLLP GKALRAT+ N   FE +RV LEARNLELK EAE +A  L G+TFV+IR AGDTGQLYGSVS RD++EAI+ GGFS++RRQV+++KPIK LGLHEV+V LHPEV VKV++NVARSADEAERQARGEDVT++++E P++ET+SED
Sbjct:    1 MEVILLERVGRLGQMGDVVKVKDGYARNFLLPQGKALRATEANRKTFEGQRVQLEARNLELKTEAEGIAGRLDGQTFVSIRQAGDTGQLYGSVSTRDIAEAISAGGFSVERRQVLLDKPIKALGLHEVRVALHPEVAVKVSINVARSADEAERQARGEDVTVIREELPEIETYSED 176          
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Match: A0A2W4L1R7_9PROT (50S ribosomal protein L9 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L1R7_9PROT)

HSP 1 Score: 260 bits (664), Expect = 9.090e-86
Identity = 133/189 (70.37%), Postives = 162/189 (85.71%), Query Frame = 0
Query:    1 MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETRRVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSEAITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADEAERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDG 189
            MQVILLER+GRLGQMGDVV VKDGYARN+LLP GKALRATK+NM +F+ RRV LEARNLELK EAE VAA L G+TFVAIR AGDTGQLYGSVS RD++E +  GGF++DR QV++++ IKTLGLH VK++LHPEV VKVT+NVARS +EA RQARGEDVT+V++E  +LETF+ +++FE+   PA +G
Sbjct:    1 MQVILLERVGRLGQMGDVVNVKDGYARNYLLPKGKALRATKENMEEFQKRRVQLEARNLELKKEAEAVAAKLDGQTFVAIRQAGDTGQLYGSVSTRDIAEIVRNGGFTVDRTQVILDRAIKTLGLHPVKIRLHPEVEVKVTLNVARSEEEAARQARGEDVTVVREERLELETFNPETLFEQ--PPAAEG 187          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19835.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XWA3_9HYPH1.710e-9574.3650S ribosomal protein L9 n=1 Tax=Hyphomicrobiales ... [more]
UPI00036184BB3.110e-9576.6850S ribosomal protein L9 n=1 Tax=Hyphomicrobium za... [more]
UPI0019B180A01.260e-9476.6850S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp... [more]
UPI000930291F1.740e-9072.4050S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp... [more]
UPI00092FE81B6.390e-9074.3350S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp... [more]
A0A2S5MYK0_HYPSQ1.400e-8870.5350S ribosomal protein L9 n=2 Tax=unclassified Hyph... [more]
A0A7C2RAP4_9HYPH2.430e-8871.3550S ribosomal protein L9 n=1 Tax=Hyphomicrobiales ... [more]
V5SFZ1_9HYPH4.300e-8772.3150S ribosomal protein L9 n=1 Tax=Hyphomicrobium ni... [more]
A0A1E4CVM3_9HYPH6.830e-8775.0050S ribosomal protein L9 n=1 Tax=Hyphomicrobium sp... [more]
A0A2W4L1R7_9PROT9.090e-8670.3750S ribosomal protein L9 n=1 Tax=Proteobacteria ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..176
IPR036791Ribosomal protein L9, C-terminal domain superfamilyGENE3D3.10.430.100coord: 61..147
e-value: 3.1E-23
score: 83.6
IPR036791Ribosomal protein L9, C-terminal domain superfamilySUPERFAMILY55653Ribosomal protein L9 C-domaincoord: 57..146
IPR036935Ribosomal protein L9, N-terminal domain superfamilyGENE3D3.40.5.10coord: 1..59
e-value: 2.4E-21
score: 77.0
IPR020069Ribosomal protein L9, C-terminalPFAMPF03948Ribosomal_L9_Ccoord: 64..145
e-value: 1.5E-24
score: 86.2
IPR020070Ribosomal protein L9, N-terminalPFAMPF01281Ribosomal_L9_Ncoord: 1..47
e-value: 7.1E-21
score: 73.5
IPR020070Ribosomal protein L9, N-terminalPROSITEPS00651RIBOSOMAL_L9coord: 13..40
IPR020594Ribosomal protein L9, bacteria/chloroplastTIGRFAMTIGR00158TIGR00158coord: 1..145
e-value: 1.3E-38
score: 130.8
IPR020594Ribosomal protein L9, bacteria/chloroplastHAMAPMF_00503Ribosomal_L9coord: 1..147
score: 24.931202
IPR000244Ribosomal protein L9PANTHERPTHR2136850S RIBOSOMAL PROTEIN L9coord: 2..145
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19835contigP-wetherbeei_contig19835:673..1260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19835.1.1mRNA_P-wetherbeei_contig19835.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19835 673..1260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19835.1.1 ID=prot_P-wetherbeei_contig19835.1.1|Name=mRNA_P-wetherbeei_contig19835.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
MQVILLERIGRLGQMGDVVKVKDGYARNFLLPLGKALRATKDNMADFETR
RVHLEARNLELKGEAEKVAATLSGKTFVAIRSAGDTGQLYGSVSPRDMSE
AITEGGFSIDRRQVVIEKPIKTLGLHEVKVQLHPEVIVKVTMNVARSADE
AERQARGEDVTMVKDEAPKLETFSEDSVFEEGAAPAEDGEGEDAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036791Ribosomal_L9_C_sf
IPR036935Ribosomal_L9_N_sf
IPR020069Ribosomal_L9_C
IPR020070Ribosomal_L9_N
IPR020594Ribosomal_L9_bac/chp
IPR000244Ribosomal_L9
IPR009027Ribosomal_L9/RNase_H1_N