prot_P-wetherbeei_contig19805.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19805.1.1
Unique Nameprot_P-wetherbeei_contig19805.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length122
Homology
BLAST of mRNA_P-wetherbeei_contig19805.1.1 vs. uniprot
Match: F0YHQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHQ8_AURAN)

HSP 1 Score: 75.1 bits (183), Expect = 2.790e-13
Identity = 49/127 (38.58%), Postives = 68/127 (53.54%), Query Frame = 0
Query:    2 FKHCIFQARARRVGSEQEACDFARVVAKGSQRGAYNSVAPMAFRVM-------KDGQREEGFDDYGDSGTGERLLCLLKNWNAYDIVIVVIRID-KGFMGASFIGARKFKLVVDRAKLLLESCYLQA 120
            FK   F   A  V S  +  +F     KG+QR       P A+R+         +G RE G DD GD G G++LL LL  W+  ++V+VV R D K  +G   +G R+FK+V+D AK +LE CYL +
Sbjct:   78 FKRSRFAGHAAPVASVGDV-EFVVAALKGAQR-----CVPYAYRLAGGAPGAPPEGARE-GRDDGGDVGVGDKLLHLLTQWDVENVVLVVTRDDSKSIVGGEALGVRRFKIVIDCAKSVLELCYLDS 197          
BLAST of mRNA_P-wetherbeei_contig19805.1.1 vs. uniprot
Match: A0A7S2CUC3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUC3_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.330e-13
Identity = 38/88 (43.18%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   37 NSVAPMAFRVMKDGQREEGFDDYGDSGTGERLLCLLKNWNAYDIVIVVIRID-KGFMGASFI-----GARKFKLVVDRAKLLLESCYL 118
            ++V+P A+R+    + EEG DD+GD G GE+LL LL+ W+  +++IVV R D K   G SF+     G +++++V+ RAK +LE CYL
Sbjct:   76 SAVSPCAWRL----EAEEGHDDHGDLGAGEKLLGLLQRWDVRNVIIVVTRHDSKSLHGGSFLAPEKLGIQRYRIVLGRAKHVLEQCYL 159          
BLAST of mRNA_P-wetherbeei_contig19805.1.1 vs. uniprot
Match: A0A8J2SYM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYM6_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.820e-12
Identity = 41/117 (35.04%), Postives = 66/117 (56.41%), Query Frame = 0
Query:    2 FKHCIFQARARRVGSEQEACDFARVVAKGSQRGAYNSVAPMAFRVMKDGQREEGFDDYGDSGTGERLLCLLKNWNAYDIVIVVIRID-KGFMGASFIGARKFKLVVDRAKLLLESCY 117
            F+   F+  A  V S+++   F       +       V+P AFR+   G   EG DD GD GTG++LL LL+ W+  ++ + V R D +  + +  +GA++FKL +D AK++LE+CY
Sbjct:   79 FRGMRFRGHAVPVVSDEDVAAFM------NDTSVAIGVSPCAFRLADGG---EGSDDNGDVGTGQKLLDLLRRWDVENVALCVTRDDSQSLVSSDVLGAKRFKLSLDCAKIVLEACY 186          
BLAST of mRNA_P-wetherbeei_contig19805.1.1 vs. uniprot
Match: A0A7S2W1G4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1G4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.010e-8
Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    2 FKHCIFQARARRVGSEQEACDFARVVAKGSQRGAYNSVAPMAFRVMKDGQREEGFDDYGDSGTGERLLCLLKNWNAYDIVIVVIRIDK-GFMGASFI-----GARKFKLVVDRAKLLLESCYL 118
            F+   F   A  VGS  E       V  G +  A  +  P A+R+       E     GDSG+  +LL LL+ W+  +++I+V R D+ G  G SF+     G ++F+LV++RAK ++E CY+
Sbjct:   49 FRDSSFVGLAAAVGSPSEVLKVLEQVQHG-EPWASATAWPAAWRLTSG---VESVAANGDSGSAAKLLHLLRRWDVANVIIIVTRHDRWGAHGGSFLANERLGIQRFRLVLNRAKDVIEKCYV 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19805.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
F0YHQ8_AURAN2.790e-1338.58Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2CUC3_9STRA4.330e-1343.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2SYM6_9STRA2.820e-1235.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2W1G4_9STRA2.010e-833.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001498Impact, N-terminalPFAMPF01205UPF0029coord: 4..109
e-value: 3.2E-10
score: 40.2
IPR036956Impact, N-terminal domain superfamilyGENE3D3.30.230.30coord: 1..119
e-value: 9.4E-10
score: 40.2
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 2..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19805contigP-wetherbeei_contig19805:728..1093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19805.1.1mRNA_P-wetherbeei_contig19805.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19805 728..1093 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19805.1.1 ID=prot_P-wetherbeei_contig19805.1.1|Name=mRNA_P-wetherbeei_contig19805.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp
TFKHCIFQARARRVGSEQEACDFARVVAKGSQRGAYNSVAPMAFRVMKDG
QREEGFDDYGDSGTGERLLCLLKNWNAYDIVIVVIRIDKGFMGASFIGAR
KFKLVVDRAKLLLESCYLQARQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001498Impact_N
IPR036956Impact_N_sf
IPR020568Ribosomal_S5_D2-typ_fold