prot_P-wetherbeei_contig19794.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19794.1.1
Unique Nameprot_P-wetherbeei_contig19794.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length144
Homology
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A836CC64_9STRA (Dus domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC64_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.970e-51
Identity = 90/136 (66.18%), Postives = 107/136 (78.68%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLL 136
            +R LAL YGADTVWGEE++DR +    RHVN  LGT+DYVN NG+S  F+TC AE GR+VFQ+GTS+A  A AAA+ V RDVAA+D+NM  GCPKRFS Q GMGAAL+  P+ A DI+ATLRR L VPVTAK+RLL
Sbjct:   18 LRLLALQYGADTVWGEELVDRRVSAAVRHVNHHLGTIDYVN-NGKSVAFRTCDAERGRVVFQLGTSDAARARAAAEAVARDVAAVDVNM--GCPKRFSIQGGMGAALLTNPDVACDIIATLRRALPVPVTAKIRLL 150          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A072TSA3_MEDTR (tRNA-dihydrouridine synthase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A072TSA3_MEDTR)

HSP 1 Score: 156 bits (394), Expect = 7.260e-45
Identity = 83/141 (58.87%), Postives = 99/141 (70.21%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHD 141
            +R LA  YGAD  +GEEI+D  I+K  R +N  LG+ D+V     S VF+TC  E  R+VFQIGTSNAV AL AAQ V  DVAA+DINM  GCPK FS   GMGAAL+  PE  +DI+ TLRRNL++PVT K+RLL S HD
Sbjct:   20 LRLLAAEYGADITYGEEIVDHKIIKCERRINEHLGSTDFVEKGTESVVFRTCDQEKNRVVFQIGTSNAVRALTAAQLVCNDVAAVDINM--GCPKAFSLSGGMGAALLSKPELISDILTTLRRNLSLPVTCKIRLLKSPHD 158          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: D8LPM6_ECTSI (Dus domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM6_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.710e-44
Identity = 90/139 (64.75%), Postives = 106/139 (76.26%), Query Frame = 0
Query:    2 RTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAV---FQTCPA-EHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLL 136
            R LAL YGADTV+ EE+IDR +V   R  N +LGTVDYV   G+  +   FQTCPA E GR+V+QIGT +A  AL AAQ+VERDVAA+DINM  GCPKRFS Q GMGAAL+  P+ AADIV TLRRNL+VPV+ K+RLL
Sbjct:   29 RALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYVEKRGKKGIATPFQTCPALERGRLVYQIGTGDATNALRAAQHVERDVAAVDINM--GCPKRFSLQGGMGAALLKQPQVAADIVGTLRRNLSVPVSVKIRLL 165          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A3R7JYU6_9STRA (U1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JYU6_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.910e-44
Identity = 84/141 (59.57%), Postives = 106/141 (75.18%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHD 141
            +R L+L YGAD V+GEEI+D+ I+   R  N +L TVD+V+ NG S VF+TCP E G++VFQIGT++AV AL AA+ V RDVAA+DINM  GCPK FS Q GMGAAL+  PE A DI+ TLRRNL +PV+ K+RLL+   D
Sbjct:   22 LRLLSLRYGADLVYGEEIVDKRIISAVRVPNAVLDTVDFVSRNGDSVVFRTCPEETGKVVFQIGTADAVLALKAAEQVARDVAAVDINM--GCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLSETQD 160          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A396GKI1_MEDTR (tRNA-dihydrouridine synthase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GKI1_MEDTR)

HSP 1 Score: 156 bits (394), Expect = 3.900e-44
Identity = 83/141 (58.87%), Postives = 99/141 (70.21%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHD 141
            +R LA  YGAD  +GEEI+D  I+K  R +N  LG+ D+V     S VF+TC  E  R+VFQIGTSNAV AL AAQ V  DVAA+DINM  GCPK FS   GMGAAL+  PE  +DI+ TLRRNL++PVT K+RLL S HD
Sbjct:   20 LRLLAAEYGADITYGEEIVDHKIIKCERRINEHLGSTDFVEKGTESVVFRTCDQEKNRVVFQIGTSNAVRALTAAQLVCNDVAAVDINM--GCPKAFSLSGGMGAALLSKPELISDILTTLRRNLSLPVTCKIRLLKSPHD 158          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A803L1Z1_CHEQI (tRNA-dihydrouridine synthase n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L1Z1_CHEQI)

HSP 1 Score: 154 bits (390), Expect = 9.690e-44
Identity = 83/141 (58.87%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHD 141
            +R LA  YGAD  +GEEIID  +VK  R VN  LGT+D V    +S VF+TCP EH R+VFQ+GTS+AV AL AAQ V  DVAA+DINM  GCP+ FS   GMGAAL+  PE+  DI+ TL+RNL  PVT K+RLL + HD
Sbjct:   20 LRLLAAEYGADITYGEEIIDHKLVKCDRIVNDYLGTIDVVEKGTQSVVFRTCPEEHNRVVFQMGTSDAVRALKAAQLVCNDVAAVDINM--GCPRSFSISGGMGAALLSKPETIHDILTTLKRNLNTPVTCKIRLLKTSHD 158          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A6H5KTF8_9PHAE (Dus domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF8_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 2.380e-43
Identity = 88/139 (63.31%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    2 RTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAV---FQTCPA-EHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLL 136
            R LAL YGADTV+ EE+IDR +V   R  N +LGTVDYV   G+  +   FQTCPA E GR+V+QIGT +A  AL AAQ+VERDVAA+DINM  GCPK+FS Q GMGAAL+  P+ AADIV  LRRNL+VPV+ K+RLL
Sbjct:   29 RALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYVEKRGKKGIATPFQTCPALERGRLVYQIGTGDATNALRAAQHVERDVAAVDINM--GCPKKFSLQGGMGAALLKQPQVAADIVGILRRNLSVPVSVKIRLL 165          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A2Z6MVM0_TRISU (tRNA-dihydrouridine synthase n=2 Tax=Trifolium TaxID=3898 RepID=A0A2Z6MVM0_TRISU)

HSP 1 Score: 153 bits (387), Expect = 5.390e-43
Identity = 83/141 (58.87%), Postives = 99/141 (70.21%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHD 141
            +R LA  YGAD  +GEEI+D  IVK  R +N +LG+ D+V     S VF+TC  E  ++VFQIGTS+AV AL AAQ V  DVAAIDINM  GCPK FS   GMGAAL+  PE  +DI+ TLRRNL +PVT K+RLL S HD
Sbjct:   20 LRLLAAEYGADITYGEEIVDHKIVKCDRRINELLGSTDFVEKGTESVVFRTCDQEKDKVVFQIGTSDAVRALTAAQLVCNDVAAIDINM--GCPKPFSLSGGMGAALLSKPELISDILTTLRRNLTLPVTCKIRLLKSPHD 158          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: A0A1S2YTM0_CICAR (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YTM0_CICAR)

HSP 1 Score: 153 bits (386), Expect = 6.440e-43
Identity = 80/141 (56.74%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHD 141
            +R LA  YGAD ++GEEI+D  IVK  R +N +LG++D+V     + VF+TC  E  ++VFQIGTS+A  AL AAQ +  DVAAIDINM  GCPK FS   GMGAAL+  PE   DI+ TLRRNL++PVT K+RLL S HD
Sbjct:   20 LRLLAAEYGADIIYGEEIVDHKIVKCERRINELLGSIDFVEKGSEAVVFRTCDQEKDKVVFQIGTSDAARALTAAQLLCNDVAAIDINM--GCPKAFSLSGGMGAALLSKPELIHDILTTLRRNLSLPVTCKIRLLKSPHD 158          
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Match: H3GYM5_PHYRM (U1-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYM5_PHYRM)

HSP 1 Score: 157 bits (396), Expect = 7.170e-43
Identity = 82/141 (58.16%), Postives = 105/141 (74.47%), Query Frame = 0
Query:    1 MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQTCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQDGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHD 141
            +R L+L YGAD V+GEEI+D+ I+   R  N ++ +VD+V+ NG S VF+TCP E G++VFQIGT++AV AL AA+ V RDVAA+DINM  GCPK FS Q GMGAAL+  PE A DI+ TLRRNL +PV+ K+RLL    D
Sbjct:   22 LRLLSLRYGADLVYGEEIVDKRIISAVRMKNEVINSVDFVSRNGDSVVFRTCPEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINM--GCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLPEIQD 160          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19794.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC64_9STRA2.970e-5166.18Dus domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A072TSA3_MEDTR7.260e-4558.87tRNA-dihydrouridine synthase n=2 Tax=Medicago trun... [more]
D8LPM6_ECTSI1.710e-4464.75Dus domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A3R7JYU6_9STRA1.910e-4459.57U1-type domain-containing protein n=3 Tax=Phytopht... [more]
A0A396GKI1_MEDTR3.900e-4458.87tRNA-dihydrouridine synthase n=2 Tax=Medicago trun... [more]
A0A803L1Z1_CHEQI9.690e-4458.87tRNA-dihydrouridine synthase n=3 Tax=Chenopodium q... [more]
A0A6H5KTF8_9PHAE2.380e-4363.31Dus domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2Z6MVM0_TRISU5.390e-4358.87tRNA-dihydrouridine synthase n=2 Tax=Trifolium Tax... [more]
A0A1S2YTM0_CICAR6.440e-4356.74tRNA-dihydrouridine(20) synthase [NAD(P)+]-like n=... [more]
H3GYM5_PHYRM7.170e-4358.16U1-type domain-containing protein n=1 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035587DUS-like, FMN-binding domainPFAMPF01207Duscoord: 33..136
e-value: 6.7E-21
score: 74.6
IPR035587DUS-like, FMN-binding domainCDDcd02801DUS_like_FMNcoord: 1..141
e-value: 9.3824E-35
score: 118.751
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..143
e-value: 8.2E-31
score: 109.1
NoneNo IPR availablePIRSRPIRSR006621-1PIRSR006621-1coord: 38..141
e-value: 9.9E-19
score: 65.3
NoneNo IPR availablePANTHERPTHR45936TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKEcoord: 1..141
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19794contigP-wetherbeei_contig19794:243..1141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19794.1.1mRNA_P-wetherbeei_contig19794.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19794 243..1165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19794.1.1 ID=prot_P-wetherbeei_contig19794.1.1|Name=mRNA_P-wetherbeei_contig19794.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MRTLALSYGADTVWGEEIIDRAIVKTRRHVNLMLGTVDYVNANGRSAVFQ
TCPAEHGRMVFQIGTSNAVTALAAAQYVERDVAAIDINMASGCPKRFSTQ
DGMGAALMVAPESAADIVATLRRNLAVPVTAKMRLLASEHDVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035587DUS-like_FMN-bd
IPR013785Aldolase_TIM