prot_P-wetherbeei_contig18668.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18668.1.1
Unique Nameprot_P-wetherbeei_contig18668.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length341
Homology
BLAST of mRNA_P-wetherbeei_contig18668.1.1 vs. uniprot
Match: A0A6H5KZD4_9PHAE (DUF4201 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD4_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.570e-33
Identity = 96/269 (35.69%), Postives = 142/269 (52.79%), Query Frame = 0
Query:   93 VCERIKEAALNRINAGRADAGLSLLVRDEALCDAADAHCEAMSAFDYVSHWDPAGNKPYQRYADASGGHHLSETLYGAPLDASDDEESAATRQILTLIDARLAA-ARAAAATAGEHVLAPEHTHVGVGIGAWGGRLRYVELYADHYVELTFDGAGSSVMAGEAAAY----------GPCACIAYLEPPPQPLTAEELRAHFTGPYEDGPAA--------SRVAAVAPWDMRFDPVT-GAFSVPLQLPFSEAGSCYVQLFLSPDAESVPY 341
            +  R++E A+  INA      L LL  DEAL   A  HC  M   D++SHWD AG KPYQRY+D + G H+SE ++   ++ + ++E     +I   I+ RL A A         H+L  +HTH+G+G+     RLRY E+YAD Y+EL    A  SV    + ++          GP AC+ + +P   PLT  EL+  F+GPY D   +        ++V+ + PW M  D +  G F +P+ +   EAG+ YVQ+ +  D  S+PY
Sbjct:  112 LYRRVRELAVEAINA------LELLSPDEALAVPAMTHCRRMCEHDFLSHWDMAGRKPYQRYSDFAYGQHVSEDVFEFRVNEAAEDEI--MNRIKECIEGRLGADALDQEGGKTNHLLDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDSPAELSVADAASGSHISVQMTSSDVGPYACLVFHDPVATPLTVGELQQQFSGPYSDFTTSQTKAWCFIAKVSIIWPWQM--DVLEDGVFGIPVSVSPIEAGTYYVQILVREDPGSIPY 370          
BLAST of mRNA_P-wetherbeei_contig18668.1.1 vs. uniprot
Match: UPI001B8C7395 (CAP domain-containing protein n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8C7395)

HSP 1 Score: 58.9 bits (141), Expect = 3.620e-6
Identity = 56/207 (27.05%), Postives = 85/207 (41.06%), Query Frame = 0
Query:   86 QNGMDKLVCERIKEAALNRINAGRADAGLSLLVRDEALCDAADAHCEAMSAFDYVSHWDPAGNKPYQRYADASGGHHLSET---LYGAPLDASDDEESAATRQILTLIDARLAAARAAAATAGEHVLAPEHTHVGVGIGAWGGRLRYVELYADHYVELT-----------FDGAGSSVMAGEAAAYGPCACIAYLEPPPQPLTAEEL 278
            ++G   L  + ++   L  INA R   G   +  DE     A+AH   M+ ++Y+SHW+  G KPY RY    G  + +E    L G    A+ D   A   Q+   +            T    +L PEHTH+G+G    G  LR  + +   YV +                G  V   E   Y     + + EP P+P+T ++L
Sbjct:   35 KSGQATLDVDFLRHELLAVINAQRERVGAPPVALDELANQVAEAHARDMAEYNYLSHWNRDGWKPYMRYGLRGGTDYSAENVSMLSGLSPRATLDSIKAELLQLHQSMHDETPPNDGHRRT----ILNPEHTHLGLGFAVVGKELRMAQEFLSRYVHVEPLPTRARPGDRLSVVGQVVNPAEMLFYS---AMVHHEPLPRPMTLDQL 234          
BLAST of mRNA_P-wetherbeei_contig18668.1.1 vs. uniprot
Match: A0A5M4AD53_9BACT (SCP domain-containing protein n=2 Tax=Prolixibacter TaxID=314318 RepID=A0A5M4AD53_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 7.190e-6
Identity = 55/204 (26.96%), Postives = 84/204 (41.18%), Query Frame = 0
Query:  139 YVSHWDPAGNKPYQRYADASGGHHLSETLYGAPLDASDDEESAATRQILTLIDARLAAARAAAATAGEHVLAPEHTHVGVGIGAWGGRLRYVELYADHYVELTFDGAGSSVMAGEAAAYG---------PCACIAYLEPPPQPLTAEELRAHFTGPYEDGPAASRVAAVAPWDMRFDPVTGAFSVPLQLPFSEAGSCYVQLFLS 333
            +  HW+  G KPY RYA ASG  H+SE             E     +++    +     +A      + V+ P H +VG+G        RY E + D Y  L F     ++  GE A            P A I Y EPP +P+T +++  +    Y D    SR  A   W  +         + L+  F++ G  Y+Q++LS
Sbjct:  114 FFGHWNLEGEKPYHRYAFASGTDHVSENASALITTGRISPEFDDIVKLMENAHSGFMKEKAPNDGHKQTVIGPFHNYVGIGTAWCEHGFRYYEEFIDRY--LQFHPFRQTIKKGETATIKFRLLDKKLYPYAIIGYYEPPLKPMTRDQI--NRLNSYND---FSRDIAFQLWPWQIPSANRDGYITLRKRFNKKGLYYIQIYLS 310          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18668.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZD4_9PHAE1.570e-3335.69DUF4201 domain-containing protein n=2 Tax=Ectocarp... [more]
UPI001B8C73953.620e-627.05CAP domain-containing protein n=1 Tax=Chloracidoba... [more]
A0A5M4AD53_9BACT7.190e-626.96SCP domain-containing protein n=2 Tax=Prolixibacte... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 81..242
e-value: 1.4E-13
score: 53.2
IPR014044CAP domainPFAMPF00188CAPcoord: 102..170
e-value: 3.9E-5
score: 24.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18668contigP-wetherbeei_contig18668:109..1299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18668.1.1mRNA_P-wetherbeei_contig18668.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18668 103..1299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18668.1.1 ID=prot_P-wetherbeei_contig18668.1.1|Name=mRNA_P-wetherbeei_contig18668.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=341bp
MEDPSDGGDDASRQSEVDQGQEGAADADSHEDASADGNGGTKVVEGLTVD
AAEPESDVPAPAGHGDGFSDREEDGDDGGVENGPPQNGMDKLVCERIKEA
ALNRINAGRADAGLSLLVRDEALCDAADAHCEAMSAFDYVSHWDPAGNKP
YQRYADASGGHHLSETLYGAPLDASDDEESAATRQILTLIDARLAAARAA
AATAGEHVLAPEHTHVGVGIGAWGGRLRYVELYADHYVELTFDGAGSSVM
AGEAAAYGPCACIAYLEPPPQPLTAEELRAHFTGPYEDGPAASRVAAVAP
WDMRFDPVTGAFSVPLQLPFSEAGSCYVQLFLSPDAESVPY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035940CAP_sf
IPR014044CAP_domain