prot_P-wetherbeei_contig1832.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1832.3.1
Unique Nameprot_P-wetherbeei_contig1832.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length53
Homology
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: A0A836CNH8_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH8_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 7.100e-10
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 RCVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKLQGQG 53
            RC H L AH  G NDV F  +GA++A+ GDDG V+VWD ++GQ RAKL   G
Sbjct:  221 RCRHRLPAHASGINDVVFSESGALIASGGDDGCVKVWDTASGQQRAKLSAAG 272          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: A0A7W6RHT6_9PROT (Nucleoside phosphorylase/uncharacterized protein YjbI with pentapeptide repeats (Fragment) n=2 Tax=Roseospira visakhapatnamensis TaxID=390880 RepID=A0A7W6RHT6_9PROT)

HSP 1 Score: 52.4 bits (124), Expect = 1.790e-6
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 GRCVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKL 49
            G  + +L+ HGG  N   +  +G V+A+AGDDGT+R+WDA TG+PRA L
Sbjct: 1020 GTRLVSLTGHGGSVNACAWSPDGRVLASAGDDGTLRLWDAETGEPRAVL 1068          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: D8LL04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL04_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 6.210e-6
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:    2 RCVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKLQG 51
            RC   + AH  G N V F   G ++ATAGDD  V+VWD  +G+ RA L+G
Sbjct:  246 RCFQAIEAHSSGVNGVVFEKGGVLLATAGDDSYVKVWDPGSGRQRAALKG 295          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: K9WXT8_9NOST (WD40 repeat-containing protein n=1 Tax=Cylindrospermum stagnale PCC 7417 TaxID=56107 RepID=K9WXT8_9NOST)

HSP 1 Score: 50.1 bits (118), Expect = 1.170e-5
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 GRCVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTG 43
            G+C+ TL  H  G   V F  +G+++ATAGDD TVR+WDA+TG
Sbjct: 1097 GKCIKTLEGHTSGVYFVIFSPDGSLLATAGDDQTVRIWDANTG 1139          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: A0A835SK34_CHLIN (ABC transporter domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SK34_CHLIN)

HSP 1 Score: 50.1 bits (118), Expect = 1.180e-5
Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 0
Query:    3 CVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKL 49
            CV   + H G  N VCF  +G  + + GDD T+RVWDASTG+ +A L
Sbjct: 1189 CVLVCTGHSGAVNGVCFSPDGCSIVSGGDDKTLRVWDASTGEYKATL 1235          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: UPI0019322967 (TIR domain-containing protein n=3 Tax=Frankia TaxID=1854 RepID=UPI0019322967)

HSP 1 Score: 49.3 bits (116), Expect = 2.200e-5
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    1 GRCVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKL 49
            G C HTL+ H G    + F   GA++A+ GDDGT+R+WD  TG+ R  L
Sbjct: 1484 GACRHTLAGHLGQVRAIAFDPAGALLASTGDDGTLRLWDTDTGRERVAL 1532          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: UPI001E35538B (trypsin-like peptidase domain-containing protein n=1 Tax=Streptomyces griseosporeus TaxID=1910 RepID=UPI001E35538B)

HSP 1 Score: 48.9 bits (115), Expect = 3.000e-5
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    7 LSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKLQG 51
            L  H  G N V F ++G  +ATAG DGTVRVWD  T +PR  L+G
Sbjct:  759 LLGHSEGVNSVAFSSDGHTLATAGSDGTVRVWDTDTDKPRTTLRG 803          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: K9RZL8_SYNP3 (WD40 repeat-containing protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RZL8_SYNP3)

HSP 1 Score: 48.9 bits (115), Expect = 3.010e-5
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    3 CVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKLQG 51
            C HTLS H G    + F  +G++VATAG D  +R+W  STGQP A L G
Sbjct:  801 CRHTLSLHRGQLLGLSFSPDGSLVATAGQDSLIRLWQVSTGQPVATLAG 849          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: A0A0N0AMZ4_9ACTN (Non-specific serine/threonine protein kinase n=2 Tax=Nocardiopsis sp. NRRL B-16309 TaxID=1519494 RepID=A0A0N0AMZ4_9ACTN)

HSP 1 Score: 48.5 bits (114), Expect = 4.100e-5
Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    6 TLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKLQG 51
            T + H G  + V FGA+G  +ATAG DGTVR+WDA TG   A L G
Sbjct:  381 TFAGHEGSVDAVAFGADGDTLATAGSDGTVRLWDAGTGDQVATLTG 426          
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Match: UPI001EE4808B (winged helix-turn-helix domain-containing protein n=1 Tax=Salsipaludibacter albus TaxID=2849650 RepID=UPI001EE4808B)

HSP 1 Score: 48.5 bits (114), Expect = 4.130e-5
Identity = 26/53 (49.06%), Postives = 30/53 (56.60%), Query Frame = 0
Query:    1 GRCVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKLQGQG 53
            G  V   + H    NDV F A+GA+VATAGDDG  +VWD  TGQ  A     G
Sbjct: 1080 GESVLAFTGHDVDINDVVFSADGALVATAGDDGAAKVWDVDTGQQVASFSYDG 1132          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1832.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A836CNH8_9STRA7.100e-1055.77WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7W6RHT6_9PROT1.790e-651.02Nucleoside phosphorylase/uncharacterized protein Y... [more]
D8LL04_ECTSI6.210e-648.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K9WXT8_9NOST1.170e-553.49WD40 repeat-containing protein n=1 Tax=Cylindrospe... [more]
A0A835SK34_CHLIN1.180e-548.94ABC transporter domain-containing protein n=1 Tax=... [more]
UPI00193229672.200e-546.94TIR domain-containing protein n=3 Tax=Frankia TaxI... [more]
UPI001E35538B3.000e-553.33trypsin-like peptidase domain-containing protein n... [more]
K9RZL8_SYNP33.010e-551.02WD40 repeat-containing protein n=1 Tax=Synechococc... [more]
A0A0N0AMZ4_9ACTN4.100e-554.35Non-specific serine/threonine protein kinase n=2 T... [more]
UPI001EE4808B4.130e-549.06winged helix-turn-helix domain-containing protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 2..39
e-value: 2.9E-6
score: 36.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 1..39
e-value: 1.9E-10
score: 41.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 7..48
score: 14.284707
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..53
e-value: 3.6E-15
score: 58.1
NoneNo IPR availablePANTHERPTHR42968WD REPEAT-CONTAININGcoord: 2..52
NoneNo IPR availablePANTHERPTHR42968:SF10WD REPEAT-CONTAINING PROTEIN WDR-5.2-RELATEDcoord: 2..52
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 7..44
score: 11.339228
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 26..40
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1832contigP-wetherbeei_contig1832:5803..5961 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1832.3.1mRNA_P-wetherbeei_contig1832.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1832 5803..5961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1832.3.1 ID=prot_P-wetherbeei_contig1832.3.1|Name=mRNA_P-wetherbeei_contig1832.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=53bp
GRCVHTLSAHGGGANDVCFGANGAVVATAGDDGTVRVWDASTGQPRAKLQ
GQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR011047Quinoprotein_ADH-like_supfam